Dec 14 05:03:24.349 INFO testing TuBieJun/stat_mut_sampleratio against master#bd47d6825bf4090517549d33cfef10d3300b4a75 for pr-56550 Dec 14 05:03:24.349 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56550/worker-6/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-56550/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +bd47d6825bf4090517549d33cfef10d3300b4a75-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 14 05:03:24.987 INFO [stdout] ec88b4d0c4d49e5e99d1c68c885221e7a31d14330a4a130214a3d86feb489117 Dec 14 05:03:24.989 INFO running `"docker" "start" "-a" "ec88b4d0c4d49e5e99d1c68c885221e7a31d14330a4a130214a3d86feb489117"` Dec 14 05:03:27.603 INFO [stderr] usermod: no changes Dec 14 05:03:27.759 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Dec 14 05:03:28.787 INFO [stderr] warning: unused import: `SubCommand` Dec 14 05:03:28.787 INFO [stderr] --> src/main.rs:9:22 Dec 14 05:03:28.787 INFO [stderr] | Dec 14 05:03:28.787 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Dec 14 05:03:28.787 INFO [stderr] | ^^^^^^^^^^ Dec 14 05:03:28.787 INFO [stderr] | Dec 14 05:03:28.787 INFO [stderr] = note: #[warn(unused_imports)] on by default Dec 14 05:03:28.787 INFO [stderr] Dec 14 05:03:28.905 INFO [stderr] warning: variable does not need to be mutable Dec 14 05:03:28.905 INFO [stderr] --> src/main.rs:18:9 Dec 14 05:03:28.905 INFO [stderr] | Dec 14 05:03:28.905 INFO [stderr] 18 | let mut f = File::open(vcf_l) Dec 14 05:03:28.905 INFO [stderr] | ----^ Dec 14 05:03:28.905 INFO [stderr] | | Dec 14 05:03:28.905 INFO [stderr] | help: remove this `mut` Dec 14 05:03:28.905 INFO [stderr] | Dec 14 05:03:28.905 INFO [stderr] = note: #[warn(unused_mut)] on by default Dec 14 05:03:28.905 INFO [stderr] Dec 14 05:03:28.918 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 14 05:03:28.918 INFO [stderr] --> src/main.rs:13:13 Dec 14 05:03:28.918 INFO [stderr] | Dec 14 05:03:28.918 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Dec 14 05:03:28.918 INFO [stderr] | ^^^^^^^^^^ Dec 14 05:03:28.918 INFO [stderr] | Dec 14 05:03:28.918 INFO [stderr] = note: #[warn(non_snake_case)] on by default Dec 14 05:03:28.918 INFO [stderr] Dec 14 05:03:28.918 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 14 05:03:28.918 INFO [stderr] --> src/main.rs:96:53 Dec 14 05:03:28.918 INFO [stderr] | Dec 14 05:03:28.918 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Dec 14 05:03:28.918 INFO [stderr] | ^^^^^^^^^^ Dec 14 05:03:28.918 INFO [stderr] Dec 14 05:03:28.926 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 14 05:03:28.926 INFO [stderr] --> src/main.rs:100:5 Dec 14 05:03:28.927 INFO [stderr] | Dec 14 05:03:28.927 INFO [stderr] 100 | writer.write(header.as_bytes()); Dec 14 05:03:28.927 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 14 05:03:28.927 INFO [stderr] | Dec 14 05:03:28.927 INFO [stderr] = note: #[warn(unused_must_use)] on by default Dec 14 05:03:28.927 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 14 05:03:28.927 INFO [stderr] Dec 14 05:03:28.927 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 14 05:03:28.927 INFO [stderr] --> src/main.rs:112:9 Dec 14 05:03:28.927 INFO [stderr] | Dec 14 05:03:28.927 INFO [stderr] 112 | writer.write(info.as_bytes()); Dec 14 05:03:28.927 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 14 05:03:28.927 INFO [stderr] | Dec 14 05:03:28.928 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 14 05:03:28.928 INFO [stderr] Dec 14 05:03:28.928 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 14 05:03:28.928 INFO [stderr] --> src/main.rs:155:9 Dec 14 05:03:28.928 INFO [stderr] | Dec 14 05:03:28.928 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Dec 14 05:03:28.928 INFO [stderr] | ^^^^^^^^^^^^^^ Dec 14 05:03:28.928 INFO [stderr] Dec 14 05:03:31.227 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.60s Dec 14 05:03:31.231 INFO [stderr] su: No module specific data is present Dec 14 05:03:32.807 INFO running `"docker" "inspect" "ec88b4d0c4d49e5e99d1c68c885221e7a31d14330a4a130214a3d86feb489117"` Dec 14 05:03:33.180 INFO running `"docker" "rm" "-f" "ec88b4d0c4d49e5e99d1c68c885221e7a31d14330a4a130214a3d86feb489117"` Dec 14 05:03:33.476 INFO [stdout] ec88b4d0c4d49e5e99d1c68c885221e7a31d14330a4a130214a3d86feb489117 Dec 14 05:03:33.481 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56550/worker-6/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-56550/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +bd47d6825bf4090517549d33cfef10d3300b4a75-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 14 05:03:33.995 INFO [stdout] 2bc7e88fdcea22656967608c5c91a6c2562865e619dec8f2f7049cc1556588f7 Dec 14 05:03:33.997 INFO running `"docker" "start" "-a" "2bc7e88fdcea22656967608c5c91a6c2562865e619dec8f2f7049cc1556588f7"` Dec 14 05:03:35.690 INFO [stderr] usermod: no changes Dec 14 05:03:35.823 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Dec 14 05:03:36.883 INFO [stderr] warning: unused import: `SubCommand` Dec 14 05:03:36.883 INFO [stderr] --> src/main.rs:9:22 Dec 14 05:03:36.883 INFO [stderr] | Dec 14 05:03:36.883 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Dec 14 05:03:36.883 INFO [stderr] | ^^^^^^^^^^ Dec 14 05:03:36.883 INFO [stderr] | Dec 14 05:03:36.883 INFO [stderr] = note: #[warn(unused_imports)] on by default Dec 14 05:03:36.883 INFO [stderr] Dec 14 05:03:36.987 INFO [stderr] warning: variable does not need to be mutable Dec 14 05:03:36.987 INFO [stderr] --> src/main.rs:18:9 Dec 14 05:03:36.987 INFO [stderr] | Dec 14 05:03:36.987 INFO [stderr] 18 | let mut f = File::open(vcf_l) Dec 14 05:03:36.987 INFO [stderr] | ----^ Dec 14 05:03:36.987 INFO [stderr] | | Dec 14 05:03:36.987 INFO [stderr] | help: remove this `mut` Dec 14 05:03:36.987 INFO [stderr] | Dec 14 05:03:36.987 INFO [stderr] = note: #[warn(unused_mut)] on by default Dec 14 05:03:36.987 INFO [stderr] Dec 14 05:03:36.999 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 14 05:03:36.999 INFO [stderr] --> src/main.rs:13:13 Dec 14 05:03:36.999 INFO [stderr] | Dec 14 05:03:36.999 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Dec 14 05:03:36.999 INFO [stderr] | ^^^^^^^^^^ Dec 14 05:03:36.999 INFO [stderr] | Dec 14 05:03:36.999 INFO [stderr] = note: #[warn(non_snake_case)] on by default Dec 14 05:03:36.999 INFO [stderr] Dec 14 05:03:36.999 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 14 05:03:36.999 INFO [stderr] --> src/main.rs:96:53 Dec 14 05:03:36.999 INFO [stderr] | Dec 14 05:03:36.999 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Dec 14 05:03:36.999 INFO [stderr] | ^^^^^^^^^^ Dec 14 05:03:36.999 INFO [stderr] Dec 14 05:03:37.007 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 14 05:03:37.007 INFO [stderr] --> src/main.rs:100:5 Dec 14 05:03:37.007 INFO [stderr] | Dec 14 05:03:37.007 INFO [stderr] 100 | writer.write(header.as_bytes()); Dec 14 05:03:37.007 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 14 05:03:37.007 INFO [stderr] | Dec 14 05:03:37.007 INFO [stderr] = note: #[warn(unused_must_use)] on by default Dec 14 05:03:37.007 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 14 05:03:37.007 INFO [stderr] Dec 14 05:03:37.007 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 14 05:03:37.007 INFO [stderr] --> src/main.rs:112:9 Dec 14 05:03:37.007 INFO [stderr] | Dec 14 05:03:37.007 INFO [stderr] 112 | writer.write(info.as_bytes()); Dec 14 05:03:37.007 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 14 05:03:37.007 INFO [stderr] | Dec 14 05:03:37.007 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 14 05:03:37.007 INFO [stderr] Dec 14 05:03:37.007 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 14 05:03:37.007 INFO [stderr] --> src/main.rs:155:9 Dec 14 05:03:37.007 INFO [stderr] | Dec 14 05:03:37.007 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Dec 14 05:03:37.007 INFO [stderr] | ^^^^^^^^^^^^^^ Dec 14 05:03:37.007 INFO [stderr] Dec 14 05:03:37.468 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.75s Dec 14 05:03:37.472 INFO [stderr] su: No module specific data is present Dec 14 05:03:38.904 INFO running `"docker" "inspect" "2bc7e88fdcea22656967608c5c91a6c2562865e619dec8f2f7049cc1556588f7"` Dec 14 05:03:39.257 INFO running `"docker" "rm" "-f" "2bc7e88fdcea22656967608c5c91a6c2562865e619dec8f2f7049cc1556588f7"` Dec 14 05:03:39.603 INFO [stdout] 2bc7e88fdcea22656967608c5c91a6c2562865e619dec8f2f7049cc1556588f7 Dec 14 05:03:39.611 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56550/worker-6/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-56550/master#bd47d6825bf4090517549d33cfef10d3300b4a75:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +bd47d6825bf4090517549d33cfef10d3300b4a75-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 14 05:03:40.141 INFO [stdout] c6d97c3f9d9de20997a44f537e55416de3709843a57c95e00583d50311030aa6 Dec 14 05:03:40.143 INFO running `"docker" "start" "-a" "c6d97c3f9d9de20997a44f537e55416de3709843a57c95e00583d50311030aa6"` Dec 14 05:03:42.834 INFO [stderr] usermod: no changes Dec 14 05:03:42.971 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.11s Dec 14 05:03:42.993 INFO [stderr] Running /target/debug/deps/stat_germline_pos-f73b8561e28ce980 Dec 14 05:03:42.995 INFO [stdout] Dec 14 05:03:42.995 INFO [stdout] running 0 tests Dec 14 05:03:42.995 INFO [stdout] Dec 14 05:03:42.995 INFO [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Dec 14 05:03:42.995 INFO [stdout] Dec 14 05:03:43.001 INFO [stderr] su: No module specific data is present Dec 14 05:03:44.483 INFO running `"docker" "inspect" "c6d97c3f9d9de20997a44f537e55416de3709843a57c95e00583d50311030aa6"` Dec 14 05:03:44.869 INFO running `"docker" "rm" "-f" "c6d97c3f9d9de20997a44f537e55416de3709843a57c95e00583d50311030aa6"` Dec 14 05:03:45.235 INFO [stdout] c6d97c3f9d9de20997a44f537e55416de3709843a57c95e00583d50311030aa6