Dec 06 08:53:53.741 INFO testing TuBieJun/stat_mut_sampleratio against try#6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468 for pr-56514 Dec 06 08:53:53.741 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-2/try#6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/pr-56514/try#6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 08:53:54.329 INFO [stdout] ae6c0cd966ef25d4615517573e8823e8db4211b7e819f42ed8ee1269b62e8439 Dec 06 08:53:54.331 INFO running `"docker" "start" "-a" "ae6c0cd966ef25d4615517573e8823e8db4211b7e819f42ed8ee1269b62e8439"` Dec 06 08:53:56.768 INFO [stderr] usermod: no changes Dec 06 08:53:56.908 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Dec 06 08:53:57.873 INFO [stderr] warning: unused import: `SubCommand` Dec 06 08:53:57.874 INFO [stderr] --> src/main.rs:9:22 Dec 06 08:53:57.874 INFO [stderr] | Dec 06 08:53:57.874 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Dec 06 08:53:57.875 INFO [stderr] | ^^^^^^^^^^ Dec 06 08:53:57.875 INFO [stderr] | Dec 06 08:53:57.875 INFO [stderr] = note: #[warn(unused_imports)] on by default Dec 06 08:53:57.876 INFO [stderr] Dec 06 08:53:57.991 INFO [stderr] warning: variable does not need to be mutable Dec 06 08:53:57.991 INFO [stderr] --> src/main.rs:18:9 Dec 06 08:53:57.992 INFO [stderr] | Dec 06 08:53:57.992 INFO [stderr] 18 | let mut f = File::open(vcf_l) Dec 06 08:53:57.992 INFO [stderr] | ----^ Dec 06 08:53:57.993 INFO [stderr] | | Dec 06 08:53:57.993 INFO [stderr] | help: remove this `mut` Dec 06 08:53:57.993 INFO [stderr] | Dec 06 08:53:57.994 INFO [stderr] = note: #[warn(unused_mut)] on by default Dec 06 08:53:57.994 INFO [stderr] Dec 06 08:53:58.003 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 06 08:53:58.003 INFO [stderr] --> src/main.rs:13:13 Dec 06 08:53:58.003 INFO [stderr] | Dec 06 08:53:58.004 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Dec 06 08:53:58.004 INFO [stderr] | ^^^^^^^^^^ Dec 06 08:53:58.004 INFO [stderr] | Dec 06 08:53:58.005 INFO [stderr] = note: #[warn(non_snake_case)] on by default Dec 06 08:53:58.005 INFO [stderr] Dec 06 08:53:58.005 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 06 08:53:58.006 INFO [stderr] --> src/main.rs:96:53 Dec 06 08:53:58.006 INFO [stderr] | Dec 06 08:53:58.006 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Dec 06 08:53:58.006 INFO [stderr] | ^^^^^^^^^^ Dec 06 08:53:58.006 INFO [stderr] Dec 06 08:53:58.011 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 06 08:53:58.011 INFO [stderr] --> src/main.rs:100:5 Dec 06 08:53:58.011 INFO [stderr] | Dec 06 08:53:58.011 INFO [stderr] 100 | writer.write(header.as_bytes()); Dec 06 08:53:58.011 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 08:53:58.012 INFO [stderr] | Dec 06 08:53:58.012 INFO [stderr] = note: #[warn(unused_must_use)] on by default Dec 06 08:53:58.012 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 06 08:53:58.012 INFO [stderr] Dec 06 08:53:58.012 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 06 08:53:58.012 INFO [stderr] --> src/main.rs:112:9 Dec 06 08:53:58.012 INFO [stderr] | Dec 06 08:53:58.012 INFO [stderr] 112 | writer.write(info.as_bytes()); Dec 06 08:53:58.013 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 08:53:58.013 INFO [stderr] | Dec 06 08:53:58.013 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 06 08:53:58.013 INFO [stderr] Dec 06 08:53:58.013 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 06 08:53:58.013 INFO [stderr] --> src/main.rs:155:9 Dec 06 08:53:58.013 INFO [stderr] | Dec 06 08:53:58.013 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Dec 06 08:53:58.013 INFO [stderr] | ^^^^^^^^^^^^^^ Dec 06 08:53:58.013 INFO [stderr] Dec 06 08:54:00.014 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.20s Dec 06 08:54:00.018 INFO [stderr] su: No module specific data is present Dec 06 08:54:01.702 INFO running `"docker" "inspect" "ae6c0cd966ef25d4615517573e8823e8db4211b7e819f42ed8ee1269b62e8439"` Dec 06 08:54:02.088 INFO running `"docker" "rm" "-f" "ae6c0cd966ef25d4615517573e8823e8db4211b7e819f42ed8ee1269b62e8439"` Dec 06 08:54:02.440 INFO [stdout] ae6c0cd966ef25d4615517573e8823e8db4211b7e819f42ed8ee1269b62e8439 Dec 06 08:54:02.448 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-2/try#6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/pr-56514/try#6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 08:54:02.913 INFO [stdout] 20fb4f91f73ff6787fe02ae9fe3b7fcdbb3188abe9584b5864c56b672580613b Dec 06 08:54:02.915 INFO running `"docker" "start" "-a" "20fb4f91f73ff6787fe02ae9fe3b7fcdbb3188abe9584b5864c56b672580613b"` Dec 06 08:54:05.252 INFO [stderr] usermod: no changes Dec 06 08:54:05.388 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Dec 06 08:54:06.266 INFO [stderr] warning: unused import: `SubCommand` Dec 06 08:54:06.266 INFO [stderr] --> src/main.rs:9:22 Dec 06 08:54:06.266 INFO [stderr] | Dec 06 08:54:06.267 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Dec 06 08:54:06.267 INFO [stderr] | ^^^^^^^^^^ Dec 06 08:54:06.267 INFO [stderr] | Dec 06 08:54:06.268 INFO [stderr] = note: #[warn(unused_imports)] on by default Dec 06 08:54:06.268 INFO [stderr] Dec 06 08:54:06.347 INFO [stderr] warning: variable does not need to be mutable Dec 06 08:54:06.347 INFO [stderr] --> src/main.rs:18:9 Dec 06 08:54:06.347 INFO [stderr] | Dec 06 08:54:06.347 INFO [stderr] 18 | let mut f = File::open(vcf_l) Dec 06 08:54:06.348 INFO [stderr] | ----^ Dec 06 08:54:06.348 INFO [stderr] | | Dec 06 08:54:06.348 INFO [stderr] | help: remove this `mut` Dec 06 08:54:06.348 INFO [stderr] | Dec 06 08:54:06.348 INFO [stderr] = note: #[warn(unused_mut)] on by default Dec 06 08:54:06.348 INFO [stderr] Dec 06 08:54:06.359 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 06 08:54:06.359 INFO [stderr] --> src/main.rs:13:13 Dec 06 08:54:06.359 INFO [stderr] | Dec 06 08:54:06.359 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Dec 06 08:54:06.359 INFO [stderr] | ^^^^^^^^^^ Dec 06 08:54:06.359 INFO [stderr] | Dec 06 08:54:06.359 INFO [stderr] = note: #[warn(non_snake_case)] on by default Dec 06 08:54:06.359 INFO [stderr] Dec 06 08:54:06.360 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 06 08:54:06.360 INFO [stderr] --> src/main.rs:96:53 Dec 06 08:54:06.360 INFO [stderr] | Dec 06 08:54:06.360 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Dec 06 08:54:06.360 INFO [stderr] | ^^^^^^^^^^ Dec 06 08:54:06.360 INFO [stderr] Dec 06 08:54:06.368 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 06 08:54:06.368 INFO [stderr] --> src/main.rs:100:5 Dec 06 08:54:06.368 INFO [stderr] | Dec 06 08:54:06.368 INFO [stderr] 100 | writer.write(header.as_bytes()); Dec 06 08:54:06.368 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 08:54:06.368 INFO [stderr] | Dec 06 08:54:06.368 INFO [stderr] = note: #[warn(unused_must_use)] on by default Dec 06 08:54:06.368 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 06 08:54:06.368 INFO [stderr] Dec 06 08:54:06.368 INFO [stderr] warning: unused `std::result::Result` that must be used Dec 06 08:54:06.368 INFO [stderr] --> src/main.rs:112:9 Dec 06 08:54:06.369 INFO [stderr] | Dec 06 08:54:06.369 INFO [stderr] 112 | writer.write(info.as_bytes()); Dec 06 08:54:06.369 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 08:54:06.369 INFO [stderr] | Dec 06 08:54:06.369 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Dec 06 08:54:06.369 INFO [stderr] Dec 06 08:54:06.369 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Dec 06 08:54:06.369 INFO [stderr] --> src/main.rs:155:9 Dec 06 08:54:06.369 INFO [stderr] | Dec 06 08:54:06.369 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Dec 06 08:54:06.369 INFO [stderr] | ^^^^^^^^^^^^^^ Dec 06 08:54:06.369 INFO [stderr] Dec 06 08:54:06.794 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.51s Dec 06 08:54:06.798 INFO [stderr] su: No module specific data is present Dec 06 08:54:08.429 INFO running `"docker" "inspect" "20fb4f91f73ff6787fe02ae9fe3b7fcdbb3188abe9584b5864c56b672580613b"` Dec 06 08:54:08.810 INFO running `"docker" "rm" "-f" "20fb4f91f73ff6787fe02ae9fe3b7fcdbb3188abe9584b5864c56b672580613b"` Dec 06 08:54:09.148 INFO [stdout] 20fb4f91f73ff6787fe02ae9fe3b7fcdbb3188abe9584b5864c56b672580613b Dec 06 08:54:09.156 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-2/try#6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/pr-56514/try#6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6eb0fd3ac58f9b16bddb9924a17c3b6c156aa468-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 08:54:09.653 INFO [stdout] 771278492a1ac2ed9cf87fa81b5adc6838a0727ea10458ed03044afd468b60e4 Dec 06 08:54:09.655 INFO running `"docker" "start" "-a" "771278492a1ac2ed9cf87fa81b5adc6838a0727ea10458ed03044afd468b60e4"` Dec 06 08:54:12.515 INFO [stderr] usermod: no changes Dec 06 08:54:12.604 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.06s Dec 06 08:54:12.624 INFO [stderr] Running /target/debug/deps/stat_germline_pos-82ffa67e50cf3a31 Dec 06 08:54:12.624 INFO [stderr] su: No module specific data is present Dec 06 08:54:12.624 INFO [stdout] Dec 06 08:54:12.624 INFO [stdout] running 0 tests Dec 06 08:54:12.624 INFO [stdout] Dec 06 08:54:12.624 INFO [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Dec 06 08:54:12.624 INFO [stdout] Dec 06 08:54:14.330 INFO running `"docker" "inspect" "771278492a1ac2ed9cf87fa81b5adc6838a0727ea10458ed03044afd468b60e4"` Dec 06 08:54:14.658 INFO running `"docker" "rm" "-f" "771278492a1ac2ed9cf87fa81b5adc6838a0727ea10458ed03044afd468b60e4"` Dec 06 08:54:15.056 INFO [stdout] 771278492a1ac2ed9cf87fa81b5adc6838a0727ea10458ed03044afd468b60e4