Dec 06 23:31:56.382 INFO testing seq_io-0.3.0 against master#906deae0790bd18681b937fe9a141a3c26cf1855 for pr-56514 Dec 06 23:31:56.382 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-3/master#906deae0790bd18681b937fe9a141a3c26cf1855:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-3/pr-56514/master#906deae0790bd18681b937fe9a141a3c26cf1855:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +906deae0790bd18681b937fe9a141a3c26cf1855-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 23:31:56.880 INFO [stdout] b2c55fe99e35991eacc844d8a711a39aa89db4cf5b2c7135c7326bc4145ffc20 Dec 06 23:31:56.888 INFO running `"docker" "start" "-a" "b2c55fe99e35991eacc844d8a711a39aa89db4cf5b2c7135c7326bc4145ffc20"` Dec 06 23:31:58.535 INFO [stderr] usermod: no changes Dec 06 23:31:58.983 INFO [stderr] Compiling slice-deque v0.1.16 Dec 06 23:31:59.004 INFO [stderr] Compiling semver v0.9.0 Dec 06 23:32:01.136 INFO [stderr] Compiling buf_redux v0.7.1 Dec 06 23:32:04.000 INFO [stderr] Compiling rustc_version v0.2.3 Dec 06 23:32:05.472 INFO [stderr] Compiling parking_lot_core v0.3.1 Dec 06 23:32:07.642 INFO [stderr] Compiling parking_lot v0.6.4 Dec 06 23:32:09.060 INFO [stderr] Compiling crossbeam-channel v0.2.6 Dec 06 23:32:11.152 INFO [stderr] Compiling crossbeam v0.4.1 Dec 06 23:32:12.764 INFO [stderr] Compiling seq_io v0.3.0 (/source) Dec 06 23:32:16.636 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 18.05s Dec 06 23:32:16.652 INFO [stderr] su: No module specific data is present Dec 06 23:32:17.387 INFO running `"docker" "inspect" "b2c55fe99e35991eacc844d8a711a39aa89db4cf5b2c7135c7326bc4145ffc20"` Dec 06 23:32:17.776 INFO running `"docker" "rm" "-f" "b2c55fe99e35991eacc844d8a711a39aa89db4cf5b2c7135c7326bc4145ffc20"` Dec 06 23:32:18.052 INFO [stdout] b2c55fe99e35991eacc844d8a711a39aa89db4cf5b2c7135c7326bc4145ffc20 Dec 06 23:32:18.054 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-3/master#906deae0790bd18681b937fe9a141a3c26cf1855:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-3/pr-56514/master#906deae0790bd18681b937fe9a141a3c26cf1855:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +906deae0790bd18681b937fe9a141a3c26cf1855-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 23:32:18.559 INFO [stdout] 7088524ee66ea10e7a30e33c800d14b9fd476415da8cc9fbef412afe422cba8a Dec 06 23:32:18.561 INFO running `"docker" "start" "-a" "7088524ee66ea10e7a30e33c800d14b9fd476415da8cc9fbef412afe422cba8a"` Dec 06 23:32:20.089 INFO [stderr] usermod: no changes Dec 06 23:32:20.576 INFO [stderr] Compiling lz4-sys v1.8.3 Dec 06 23:32:20.584 INFO [stderr] Compiling ndarray v0.9.1 Dec 06 23:32:20.584 INFO [stderr] Compiling flate2 v1.0.6 Dec 06 23:32:20.584 INFO [stderr] Compiling statrs v0.9.0 Dec 06 23:32:20.584 INFO [stderr] Compiling simplelog v0.5.3 Dec 06 23:32:20.584 INFO [stderr] Compiling vec_map v0.8.1 Dec 06 23:32:20.584 INFO [stderr] Compiling bio-types v0.4.0 Dec 06 23:32:20.584 INFO [stderr] Compiling multimap v0.4.0 Dec 06 23:32:23.023 INFO [stderr] Compiling bv v0.7.4 Dec 06 23:32:24.788 INFO [stderr] Compiling cargo_metadata v0.6.3 Dec 06 23:32:24.798 INFO [stderr] Compiling clap v2.32.0 Dec 06 23:32:39.023 INFO [stderr] Compiling skeptic v0.13.4 Dec 06 23:32:42.928 INFO [stderr] Compiling bio v0.22.0 Dec 06 23:33:06.466 INFO [stderr] Compiling lz4 v1.23.1 Dec 06 23:33:08.213 INFO [stderr] Compiling criterion v0.2.5 Dec 06 23:33:17.896 INFO [stderr] Compiling fastq v0.6.0 Dec 06 23:33:28.777 INFO [stderr] Compiling seq_io v0.3.0 (/source) Dec 06 23:33:38.230 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 18s Dec 06 23:33:38.245 INFO [stderr] su: No module specific data is present Dec 06 23:33:39.208 INFO running `"docker" "inspect" "7088524ee66ea10e7a30e33c800d14b9fd476415da8cc9fbef412afe422cba8a"` Dec 06 23:33:39.496 INFO running `"docker" "rm" "-f" "7088524ee66ea10e7a30e33c800d14b9fd476415da8cc9fbef412afe422cba8a"` Dec 06 23:33:39.797 INFO [stdout] 7088524ee66ea10e7a30e33c800d14b9fd476415da8cc9fbef412afe422cba8a Dec 06 23:33:39.802 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-3/master#906deae0790bd18681b937fe9a141a3c26cf1855:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-3/pr-56514/master#906deae0790bd18681b937fe9a141a3c26cf1855:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +906deae0790bd18681b937fe9a141a3c26cf1855-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 23:33:40.264 INFO [stdout] 05886bedd2e928afae164404558abc6dd15580cf4080eb254ae0e0e5375a2a13 Dec 06 23:33:40.266 INFO running `"docker" "start" "-a" "05886bedd2e928afae164404558abc6dd15580cf4080eb254ae0e0e5375a2a13"` Dec 06 23:33:41.676 INFO [stderr] usermod: no changes Dec 06 23:33:42.011 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.30s Dec 06 23:33:42.029 INFO [stdout] Dec 06 23:33:42.029 INFO [stdout] running 0 tests Dec 06 23:33:42.029 INFO [stdout] Dec 06 23:33:42.029 INFO [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Dec 06 23:33:42.029 INFO [stdout] Dec 06 23:33:42.029 INFO [stderr] Running /target/debug/deps/seq_io-6f2e36c5a9eef51a Dec 06 23:33:42.032 INFO [stderr] Running /target/debug/deps/fasta-cfbe7a8fb8c5eee2 Dec 06 23:33:42.074 INFO [stdout] Dec 06 23:33:42.074 INFO [stdout] running 20 tests Dec 06 23:33:42.074 INFO [stdout] test test_fasta_full_seq ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_invalid_start ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_empty_lines_start ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_empty_lines_end ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_empty ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_none_after_err ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_seq_lines ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_seek ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_write_seq ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_write_seq_iter ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_write_seq_iter_wrap ... ok Dec 06 23:33:42.074 INFO [stdout] test test_fasta_write_seq_wrap ... ok Dec 06 23:33:42.074 INFO [stdout] test test_write_fasta ... ok Dec 06 23:33:42.080 INFO [stdout] test test_fasta_no_newline_end ... ok Dec 06 23:33:42.080 INFO [stdout] test test_fasta_policy ... ok Dec 06 23:33:42.080 INFO [stdout] test test_fasta_truncated ... ok Dec 06 23:33:42.080 INFO [stdout] test test_fasta_write_head ... ok Dec 06 23:33:42.092 INFO [stdout] test test_fasta_reader ... ok Dec 06 23:33:42.155 INFO [stdout] test test_fasta_recset ... ok Dec 06 23:33:43.027 INFO [stdout] test test_fasta_parallel ... ok Dec 06 23:33:43.027 INFO [stdout] Dec 06 23:33:43.027 INFO [stdout] test result: ok. 20 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Dec 06 23:33:43.027 INFO [stdout] Dec 06 23:33:43.032 INFO [stderr] Running /target/debug/deps/fastq-9840bf1ba60ef9d7 Dec 06 23:33:43.034 INFO [stdout] Dec 06 23:33:43.034 INFO [stdout] running 17 tests Dec 06 23:33:43.040 INFO [stdout] test test_fastq_empty ... ok Dec 06 23:33:43.040 INFO [stdout] test test_fastq_none_after_err ... ok Dec 06 23:33:43.040 INFO [stdout] test test_fastq_no_sep ... ok Dec 06 23:33:43.040 INFO [stdout] test test_fastq_invalid_start ... ok Dec 06 23:33:43.040 INFO [stdout] test test_fastq_policy ... ok Dec 06 23:33:43.040 INFO [stdout] test test_fastq_reader ... ok Dec 06 23:33:43.060 INFO [stdout] test test_fastq_seek_err ... ok Dec 06 23:33:43.062 INFO [stdout] test test_fastq_seek_none ... ok Dec 06 23:33:43.062 INFO [stdout] test test_fastq_seek ... ok Dec 06 23:33:43.062 INFO [stdout] test test_fastq_no_newline_end ... ok Dec 06 23:33:43.068 INFO [stdout] test test_fastq_write_record ... ok Dec 06 23:33:43.068 INFO [stdout] test test_fastq_empty_lines_end ... ok Dec 06 23:33:43.068 INFO [stdout] test test_fastq_unequal ... ok Dec 06 23:33:43.068 INFO [stdout] test test_fastq_write_record_unchanged ... ok Dec 06 23:33:43.072 INFO [stdout] test test_fastq_truncated ... ok Dec 06 23:33:43.078 INFO [stdout] test test_fastq_recset ... ok Dec 06 23:33:43.401 INFO [stdout] test test_fastq_parallel ... ok Dec 06 23:33:43.401 INFO [stdout] Dec 06 23:33:43.401 INFO [stdout] test result: ok. 17 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Dec 06 23:33:43.401 INFO [stdout] Dec 06 23:33:43.417 INFO [stderr] Doc-tests seq_io Dec 06 23:33:47.456 INFO [stdout] Dec 06 23:33:47.456 INFO [stdout] running 19 tests Dec 06 23:34:09.444 INFO [stdout] test src/fastq.rs - fastq::Reader::from_path (line 79) ... ok Dec 06 23:34:18.344 INFO [stdout] test src/fasta.rs - fasta::Reader::from_path (line 75) ... ok Dec 06 23:34:21.632 INFO [stdout] test src/fasta.rs - fasta::Reader::new (line 39) ... ok Dec 06 23:34:21.813 INFO [stdout] test src/fastq.rs - fastq::Reader::new (line 48) ... ok Dec 06 23:34:22.196 INFO [stdout] test src/fasta.rs - fasta::Reader::next (line 134) ... ok Dec 06 23:34:22.268 INFO [stdout] test src/fasta.rs - fasta::Reader::seek (line 452) ... ok Dec 06 23:34:25.321 INFO [stdout] test src/fasta.rs - fasta::Reader::records (line 402) ... ok Dec 06 23:34:28.540 INFO [stdout] test src/fasta.rs - fasta::Reader::position (line 368) ... ok Dec 06 23:34:43.548 INFO [stdout] test src/fastq.rs - fastq::Reader::next (line 136) ... ok Dec 06 23:34:49.660 INFO [stdout] test src/lib.rs - (line 34) ... ok Dec 06 23:34:50.648 INFO [stdout] test src/lib.rs - (line 59) ... ok Dec 06 23:34:51.270 INFO [stdout] test src/fastq.rs - fastq::Reader::position (line 423) ... ok Dec 06 23:34:51.774 INFO [stdout] test src/fastq.rs - fastq::Reader::seek (line 511) ... ok Dec 06 23:34:51.880 INFO [stdout] test src/lib.rs - (line 16) ... ok Dec 06 23:34:52.198 INFO [stdout] test src/fastq.rs - fastq::Reader::records (line 458) ... ok Dec 06 23:34:54.516 INFO [stdout] test src/parallel.rs - parallel (line 11) ... ok Dec 06 23:34:57.312 INFO [stdout] test src/parallel.rs - parallel (line 47) ... ok Dec 06 23:34:58.482 INFO [stdout] test src/parallel.rs - parallel::ReusableReader (line 357) ... ok Dec 06 23:34:58.928 INFO [stdout] test src/policy.rs - policy::BufPolicy (line 10) ... ok Dec 06 23:34:58.928 INFO [stdout] Dec 06 23:34:58.928 INFO [stdout] test result: ok. 19 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Dec 06 23:34:58.928 INFO [stdout] Dec 06 23:34:58.976 INFO [stderr] su: No module specific data is present Dec 06 23:34:59.696 INFO running `"docker" "inspect" "05886bedd2e928afae164404558abc6dd15580cf4080eb254ae0e0e5375a2a13"` Dec 06 23:34:59.868 INFO running `"docker" "rm" "-f" "05886bedd2e928afae164404558abc6dd15580cf4080eb254ae0e0e5375a2a13"` Dec 06 23:35:00.060 INFO [stdout] 05886bedd2e928afae164404558abc6dd15580cf4080eb254ae0e0e5375a2a13