Dec 06 09:32:37.135 INFO testing StephanHeijl/global-supertrees against master#906deae0790bd18681b937fe9a141a3c26cf1855 for pr-56514 Dec 06 09:32:37.135 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-4/master#906deae0790bd18681b937fe9a141a3c26cf1855:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-4/pr-56514/master#906deae0790bd18681b937fe9a141a3c26cf1855:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +906deae0790bd18681b937fe9a141a3c26cf1855-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 09:32:37.304 INFO [stdout] b99a8a14df5763c623e7858017b573245b2b3df722de7fecb81b2e98363ea4d7 Dec 06 09:32:37.306 INFO running `"docker" "start" "-a" "b99a8a14df5763c623e7858017b573245b2b3df722de7fecb81b2e98363ea4d7"` Dec 06 09:32:37.826 INFO [stderr] usermod: no changes Dec 06 09:32:37.898 INFO [stderr] Compiling newick v0.1.0 (/source) Dec 06 09:32:39.113 INFO [stderr] warning: unused import: `std::collections::HashMap` Dec 06 09:32:39.113 INFO [stderr] --> src/tree_merging.rs:3:5 Dec 06 09:32:39.113 INFO [stderr] | Dec 06 09:32:39.113 INFO [stderr] 3 | use std::collections::HashMap; Dec 06 09:32:39.113 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.113 INFO [stderr] | Dec 06 09:32:39.113 INFO [stderr] = note: #[warn(unused_imports)] on by default Dec 06 09:32:39.113 INFO [stderr] Dec 06 09:32:39.481 INFO [stderr] warning: variable does not need to be mutable Dec 06 09:32:39.481 INFO [stderr] --> src/tree_merging.rs:21:9 Dec 06 09:32:39.481 INFO [stderr] | Dec 06 09:32:39.482 INFO [stderr] 21 | let mut new_trees: Vec = tree_leafs Dec 06 09:32:39.482 INFO [stderr] | ----^^^^^^^^^ Dec 06 09:32:39.482 INFO [stderr] | | Dec 06 09:32:39.482 INFO [stderr] | help: remove this `mut` Dec 06 09:32:39.483 INFO [stderr] | Dec 06 09:32:39.483 INFO [stderr] = note: #[warn(unused_mut)] on by default Dec 06 09:32:39.483 INFO [stderr] Dec 06 09:32:39.499 INFO [stderr] warning: method is never used: `perform_operation_on_branch` Dec 06 09:32:39.500 INFO [stderr] --> src/tree.rs:106:5 Dec 06 09:32:39.500 INFO [stderr] | Dec 06 09:32:39.500 INFO [stderr] 106 | pub fn perform_operation_on_branch(&mut self, target_branch_idx : usize, mut current_branch_idx : usize, op : &mut F) -> Option { Dec 06 09:32:39.501 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.501 INFO [stderr] | Dec 06 09:32:39.501 INFO [stderr] = note: #[warn(dead_code)] on by default Dec 06 09:32:39.501 INFO [stderr] Dec 06 09:32:39.502 INFO [stderr] warning: method is never used: `add_root_levels` Dec 06 09:32:39.502 INFO [stderr] --> src/tree.rs:250:5 Dec 06 09:32:39.502 INFO [stderr] | Dec 06 09:32:39.502 INFO [stderr] 250 | pub fn add_root_levels(&mut self, depth: usize) { Dec 06 09:32:39.503 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.503 INFO [stderr] Dec 06 09:32:39.503 INFO [stderr] warning: method is never used: `calculate_q_matrix` Dec 06 09:32:39.503 INFO [stderr] --> src/tree_distance_matrix.rs:18:5 Dec 06 09:32:39.504 INFO [stderr] | Dec 06 09:32:39.504 INFO [stderr] 18 | pub fn calculate_q_matrix(dm: &Array2) -> Array2 { Dec 06 09:32:39.504 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.504 INFO [stderr] Dec 06 09:32:39.504 INFO [stderr] warning: method is never used: `calculate_pair_distance_matrix` Dec 06 09:32:39.505 INFO [stderr] --> src/tree_distance_matrix.rs:32:5 Dec 06 09:32:39.505 INFO [stderr] | Dec 06 09:32:39.505 INFO [stderr] 32 | pub fn calculate_pair_distance_matrix(i: usize, j: usize, dm: &Array2) -> Array2 { Dec 06 09:32:39.505 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.506 INFO [stderr] Dec 06 09:32:39.506 INFO [stderr] warning: method is never used: `calculate_new_leaf_distances` Dec 06 09:32:39.506 INFO [stderr] --> src/tree_distance_matrix.rs:63:5 Dec 06 09:32:39.506 INFO [stderr] | Dec 06 09:32:39.507 INFO [stderr] 63 | pub fn calculate_new_leaf_distances(f: usize, g: usize, dm: &Array2) -> (f32, f32) { Dec 06 09:32:39.507 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.507 INFO [stderr] Dec 06 09:32:39.507 INFO [stderr] warning: method is never used: `find_min_matrix_ne` Dec 06 09:32:39.507 INFO [stderr] --> src/tree_distance_matrix.rs:79:5 Dec 06 09:32:39.508 INFO [stderr] | Dec 06 09:32:39.508 INFO [stderr] 79 | pub fn find_min_matrix_ne(matrix: Array2) -> [usize; 2] { Dec 06 09:32:39.508 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.508 INFO [stderr] Dec 06 09:32:39.508 INFO [stderr] warning: method is never used: `neighbour_joining` Dec 06 09:32:39.509 INFO [stderr] --> src/tree_distance_matrix.rs:98:5 Dec 06 09:32:39.509 INFO [stderr] | Dec 06 09:32:39.509 INFO [stderr] 98 | pub fn neighbour_joining(&self) -> Tree { Dec 06 09:32:39.509 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.510 INFO [stderr] Dec 06 09:32:39.510 INFO [stderr] warning: method is never used: `get_partial_distance_matrix` Dec 06 09:32:39.510 INFO [stderr] --> src/tree_distance_matrix.rs:450:5 Dec 06 09:32:39.510 INFO [stderr] | Dec 06 09:32:39.510 INFO [stderr] 450 | pub fn get_partial_distance_matrix(&self, leaves: &Vec) -> TreeDistanceMatrix { Dec 06 09:32:39.511 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.511 INFO [stderr] Dec 06 09:32:39.511 INFO [stderr] warning: method is never used: `new_from_matrix_and_leaves` Dec 06 09:32:39.511 INFO [stderr] --> src/tree_distance_matrix.rs:502:5 Dec 06 09:32:39.512 INFO [stderr] | Dec 06 09:32:39.512 INFO [stderr] 502 | / pub fn new_from_matrix_and_leaves( Dec 06 09:32:39.512 INFO [stderr] 503 | | distance_matrix: Array2, Dec 06 09:32:39.512 INFO [stderr] 504 | | leaves: Vec, Dec 06 09:32:39.512 INFO [stderr] 505 | | ) -> TreeDistanceMatrix { Dec 06 09:32:39.512 INFO [stderr] ... | Dec 06 09:32:39.512 INFO [stderr] 518 | | }; Dec 06 09:32:39.512 INFO [stderr] 519 | | } Dec 06 09:32:39.512 INFO [stderr] | |_____^ Dec 06 09:32:39.512 INFO [stderr] Dec 06 09:32:39.512 INFO [stderr] warning: function is never used: `merge_trees` Dec 06 09:32:39.512 INFO [stderr] --> src/tree_merging.rs:10:1 Dec 06 09:32:39.512 INFO [stderr] | Dec 06 09:32:39.512 INFO [stderr] 10 | pub fn merge_trees(trees: Vec) { Dec 06 09:32:39.512 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.512 INFO [stderr] Dec 06 09:32:39.512 INFO [stderr] warning: function is never used: `get_tree_size` Dec 06 09:32:39.512 INFO [stderr] --> src/tree_merging.rs:33:1 Dec 06 09:32:39.512 INFO [stderr] | Dec 06 09:32:39.512 INFO [stderr] 33 | fn get_tree_size(tree: &Tree) -> usize { Dec 06 09:32:39.512 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.512 INFO [stderr] Dec 06 09:32:39.513 INFO [stderr] warning: function is never used: `sibling_merging` Dec 06 09:32:39.513 INFO [stderr] --> src/tree_merging.rs:37:1 Dec 06 09:32:39.513 INFO [stderr] | Dec 06 09:32:39.513 INFO [stderr] 37 | fn sibling_merging(mut trees: Vec) -> () { Dec 06 09:32:39.513 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.513 INFO [stderr] Dec 06 09:32:39.513 INFO [stderr] warning: function is never used: `merge_distance_matrices` Dec 06 09:32:39.513 INFO [stderr] --> src/tree_merging.rs:96:1 Dec 06 09:32:39.513 INFO [stderr] | Dec 06 09:32:39.513 INFO [stderr] 96 | fn merge_distance_matrices(dms: Vec) -> TreeDistanceMatrix { Dec 06 09:32:39.513 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:39.513 INFO [stderr] Dec 06 09:32:39.513 INFO [stderr] warning: function is never used: `keys_vec` Dec 06 09:32:39.513 INFO [stderr] --> src/utils.rs:17:1 Dec 06 09:32:39.513 INFO [stderr] | Dec 06 09:32:39.513 INFO [stderr] 17 | / pub fn keys_vec( Dec 06 09:32:39.514 INFO [stderr] 18 | | hm: &HashMap, Dec 06 09:32:39.514 INFO [stderr] 19 | | ) -> Vec { Dec 06 09:32:39.514 INFO [stderr] 20 | | return hm.keys().cloned().collect(); Dec 06 09:32:39.514 INFO [stderr] 21 | | } Dec 06 09:32:39.514 INFO [stderr] | |_^ Dec 06 09:32:39.514 INFO [stderr] Dec 06 09:32:39.514 INFO [stderr] warning: function is never used: `vec_to_set` Dec 06 09:32:39.514 INFO [stderr] --> src/utils.rs:23:1 Dec 06 09:32:39.514 INFO [stderr] | Dec 06 09:32:39.514 INFO [stderr] 23 | / pub fn vec_to_set( Dec 06 09:32:39.514 INFO [stderr] 24 | | vector: &Vec, Dec 06 09:32:39.514 INFO [stderr] 25 | | ) -> HashSet { Dec 06 09:32:39.514 INFO [stderr] 26 | | let mut set: HashSet = HashSet::new(); Dec 06 09:32:39.514 INFO [stderr] ... | Dec 06 09:32:39.514 INFO [stderr] 30 | | return set; Dec 06 09:32:39.514 INFO [stderr] 31 | | } Dec 06 09:32:39.514 INFO [stderr] | |_^ Dec 06 09:32:39.514 INFO [stderr] Dec 06 09:32:41.686 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.84s Dec 06 09:32:41.690 INFO [stderr] su: No module specific data is present Dec 06 09:32:42.000 INFO running `"docker" "inspect" "b99a8a14df5763c623e7858017b573245b2b3df722de7fecb81b2e98363ea4d7"` Dec 06 09:32:42.174 INFO running `"docker" "rm" "-f" "b99a8a14df5763c623e7858017b573245b2b3df722de7fecb81b2e98363ea4d7"` Dec 06 09:32:42.365 INFO [stdout] b99a8a14df5763c623e7858017b573245b2b3df722de7fecb81b2e98363ea4d7 Dec 06 09:32:42.374 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-4/master#906deae0790bd18681b937fe9a141a3c26cf1855:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-4/pr-56514/master#906deae0790bd18681b937fe9a141a3c26cf1855:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +906deae0790bd18681b937fe9a141a3c26cf1855-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 09:32:42.648 INFO [stdout] 1f663de67c1883fb577634a749fbfa8d61b38b57cf5656af73483de639ab084f Dec 06 09:32:42.650 INFO running `"docker" "start" "-a" "1f663de67c1883fb577634a749fbfa8d61b38b57cf5656af73483de639ab084f"` Dec 06 09:32:43.059 INFO [stderr] usermod: no changes Dec 06 09:32:43.110 INFO [stderr] Compiling newick v0.1.0 (/source) Dec 06 09:32:44.331 INFO [stderr] warning: unused import: `std::collections::HashMap` Dec 06 09:32:44.331 INFO [stderr] --> src/tree_merging.rs:3:5 Dec 06 09:32:44.331 INFO [stderr] | Dec 06 09:32:44.331 INFO [stderr] 3 | use std::collections::HashMap; Dec 06 09:32:44.331 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ Dec 06 09:32:44.331 INFO [stderr] | Dec 06 09:32:44.331 INFO [stderr] = note: #[warn(unused_imports)] on by default Dec 06 09:32:44.331 INFO [stderr] Dec 06 09:32:44.715 INFO [stderr] warning: variable does not need to be mutable Dec 06 09:32:44.715 INFO [stderr] --> src/tree_merging.rs:21:9 Dec 06 09:32:44.715 INFO [stderr] | Dec 06 09:32:44.715 INFO [stderr] 21 | let mut new_trees: Vec = tree_leafs Dec 06 09:32:44.715 INFO [stderr] | ----^^^^^^^^^ Dec 06 09:32:44.715 INFO [stderr] | | Dec 06 09:32:44.715 INFO [stderr] | help: remove this `mut` Dec 06 09:32:44.715 INFO [stderr] | Dec 06 09:32:44.715 INFO [stderr] = note: #[warn(unused_mut)] on by default Dec 06 09:32:44.715 INFO [stderr] Dec 06 09:32:47.297 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 4.22s Dec 06 09:32:47.304 INFO [stderr] su: No module specific data is present Dec 06 09:32:47.747 INFO running `"docker" "inspect" "1f663de67c1883fb577634a749fbfa8d61b38b57cf5656af73483de639ab084f"` Dec 06 09:32:47.954 INFO running `"docker" "rm" "-f" "1f663de67c1883fb577634a749fbfa8d61b38b57cf5656af73483de639ab084f"` Dec 06 09:32:48.084 INFO [stdout] 1f663de67c1883fb577634a749fbfa8d61b38b57cf5656af73483de639ab084f Dec 06 09:32:48.090 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56514/worker-4/master#906deae0790bd18681b937fe9a141a3c26cf1855:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-4/pr-56514/master#906deae0790bd18681b937fe9a141a3c26cf1855:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +906deae0790bd18681b937fe9a141a3c26cf1855-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 06 09:32:48.468 INFO [stdout] 60d44b1157bb00fe9bf862158095f93eb144d070e304d154e41d6464ece90415 Dec 06 09:32:48.474 INFO running `"docker" "start" "-a" "60d44b1157bb00fe9bf862158095f93eb144d070e304d154e41d6464ece90415"` Dec 06 09:32:49.087 INFO [stderr] usermod: no changes Dec 06 09:32:49.126 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.02s Dec 06 09:32:49.127 INFO [stderr] Running /target/debug/deps/newick-8e147e29031da3b0 Dec 06 09:32:49.128 INFO [stdout] Dec 06 09:32:49.128 INFO [stdout] running 12 tests Dec 06 09:32:49.129 INFO [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_3 ... ok Dec 06 09:32:49.129 INFO [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_2 ... ok Dec 06 09:32:49.129 INFO [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_1 ... ok Dec 06 09:32:49.129 INFO [stdout] test tests::tests::test_traversal ... ok Dec 06 09:32:49.130 INFO [stdout] test tests::tests::test_find_first_zero ... ok Dec 06 09:32:49.132 INFO [stdout] test tests::tests::test_find_first_common_ancestor ... ok Dec 06 09:32:49.256 INFO [stdout] test tests::tests::test_load_tree_file ... FAILED Dec 06 09:32:49.256 INFO [stdout] test tests::tests::test_to_distance_matrix_hard ... FAILED Dec 06 09:32:49.256 INFO [stdout] test tests::tests::test_to_distance_matrix_simple ... FAILED Dec 06 09:32:49.794 INFO [stdout] test tests::tests::test_neighbour_joining ... ok Dec 06 09:32:49.836 INFO [stdout] test tests::tests::test_get_partial_tree ... ok Dec 06 09:32:50.359 INFO [stdout] test tests::tests::test_tree_merging ... ok Dec 06 09:32:50.359 INFO [stdout] Dec 06 09:32:50.359 INFO [stdout] failures: Dec 06 09:32:50.359 INFO [stdout] Dec 06 09:32:50.359 INFO [stdout] ---- tests::tests::test_load_tree_file stdout ---- Dec 06 09:32:50.359 INFO [stdout] thread 'tests::tests::test_load_tree_file' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/libcore/result.rs:1009:5 Dec 06 09:32:50.359 INFO [stdout] stack backtrace: Dec 06 09:32:50.359 INFO [stdout] 0: 0x560d5def6793 - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h3c2ada0a2db8c5e7 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Dec 06 09:32:50.359 INFO [stdout] 1: 0x560d5def0d78 - std::sys_common::backtrace::_print::h95865c77318e98b7 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/sys_common/backtrace.rs:71 Dec 06 09:32:50.359 INFO [stdout] 2: 0x560d5def5642 - std::panicking::default_hook::{{closure}}::hb3d1f299fcea42e5 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/sys_common/backtrace.rs:59 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/panicking.rs:211 Dec 06 09:32:50.359 INFO [stdout] 3: 0x560d5def532c - std::panicking::default_hook::h4eae6f26f73244c8 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/panicking.rs:221 Dec 06 09:32:50.359 INFO [stdout] 4: 0x560d5def5d50 - std::panicking::rust_panic_with_hook::h368d37fd53b59464 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/panicking.rs:491 Dec 06 09:32:50.359 INFO [stdout] 5: 0x560d5def58d1 - std::panicking::continue_panic_fmt::h1599d634b3be4304 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/panicking.rs:398 Dec 06 09:32:50.359 INFO [stdout] 6: 0x560d5def57b5 - rust_begin_unwind Dec 06 09:32:50.359 INFO [stdout] at src/libstd/panicking.rs:325 Dec 06 09:32:50.359 INFO [stdout] 7: 0x560d5df09fdc - core::panicking::panic_fmt::hdc202e6077c95723 Dec 06 09:32:50.359 INFO [stdout] at src/libcore/panicking.rs:95 Dec 06 09:32:50.359 INFO [stdout] 8: 0x560d5ddee5ab - core::result::unwrap_failed::h4d2f8cdb2773c01f Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/macros.rs:26 Dec 06 09:32:50.359 INFO [stdout] 9: 0x560d5ddec4be - >::expect::hdc0dd3b43d0094a5 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/result.rs:835 Dec 06 09:32:50.359 INFO [stdout] 10: 0x560d5de29179 - newick::utils::load_tree_file::h5d21f0aabb4946f3 Dec 06 09:32:50.359 INFO [stdout] at src/utils.rs:7 Dec 06 09:32:50.359 INFO [stdout] 11: 0x560d5ddfd757 - newick::tests::tests::test_load_tree_file::hc56c271c94e5027c Dec 06 09:32:50.359 INFO [stdout] at src/tests.rs:38 Dec 06 09:32:50.359 INFO [stdout] 12: 0x560d5ddfd6e9 - newick::tests::tests::test_load_tree_file::{{closure}}::h8cbec3f0aaa7516e Dec 06 09:32:50.359 INFO [stdout] at src/tests.rs:36 Dec 06 09:32:50.359 INFO [stdout] 13: 0x560d5ddf4dfd - core::ops::function::FnOnce::call_once::h2cc226135b061049 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/ops/function.rs:238 Dec 06 09:32:50.359 INFO [stdout] 14: 0x560d5de6c59e - >::call_box::h994167e0fc25f327 Dec 06 09:32:50.359 INFO [stdout] at src/libtest/lib.rs:1471 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/ops/function.rs:238 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:673 Dec 06 09:32:50.359 INFO [stdout] 15: 0x560d5df04419 - __rust_maybe_catch_panic Dec 06 09:32:50.359 INFO [stdout] at src/libpanic_unwind/lib.rs:102 Dec 06 09:32:50.359 INFO [stdout] 16: 0x560d5de644a3 - std::sys_common::backtrace::__rust_begin_short_backtrace::h5d34cfb78512c8c3 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:289 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:398 Dec 06 09:32:50.359 INFO [stdout] at src/libtest/lib.rs:1426 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/sys_common/backtrace.rs:136 Dec 06 09:32:50.359 INFO [stdout] 17: 0x560d5de653c4 - std::panicking::try::do_call::h7a86b6211ebb5e72 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/thread/mod.rs:477 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:319 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:310 Dec 06 09:32:50.359 INFO [stdout] 18: 0x560d5df04419 - __rust_maybe_catch_panic Dec 06 09:32:50.359 INFO [stdout] at src/libpanic_unwind/lib.rs:102 Dec 06 09:32:50.359 INFO [stdout] 19: 0x560d5de6c47c - >::call_box::h877dbe22cb3997f4 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:289 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:398 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/thread/mod.rs:476 Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:673 Dec 06 09:32:50.359 INFO [stdout] 20: 0x560d5def83dd - std::sys::unix::thread::Thread::new::thread_start::hea5f7f9c570dc4cd Dec 06 09:32:50.359 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:683 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/sys_common/thread.rs:24 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/sys/unix/thread.rs:90 Dec 06 09:32:50.359 INFO [stdout] 21: 0x7f03bf2746b9 - start_thread Dec 06 09:32:50.359 INFO [stdout] 22: 0x7f03bed9441c - clone Dec 06 09:32:50.359 INFO [stdout] 23: 0x0 - Dec 06 09:32:50.359 INFO [stdout] Dec 06 09:32:50.359 INFO [stdout] ---- tests::tests::test_to_distance_matrix_hard stdout ---- Dec 06 09:32:50.359 INFO [stdout] thread 'tests::tests::test_to_distance_matrix_hard' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/libcore/result.rs:1009:5 Dec 06 09:32:50.359 INFO [stdout] stack backtrace: Dec 06 09:32:50.359 INFO [stdout] 0: 0x560d5def6793 - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h3c2ada0a2db8c5e7 Dec 06 09:32:50.359 INFO [stdout] at src/libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Dec 06 09:32:50.360 INFO [stdout] 1: 0x560d5def0d78 - std::sys_common::backtrace::_print::h95865c77318e98b7 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/sys_common/backtrace.rs:71 Dec 06 09:32:50.360 INFO [stdout] 2: 0x560d5def5642 - std::panicking::default_hook::{{closure}}::hb3d1f299fcea42e5 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/sys_common/backtrace.rs:59 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:211 Dec 06 09:32:50.360 INFO [stdout] 3: 0x560d5def532c - std::panicking::default_hook::h4eae6f26f73244c8 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:221 Dec 06 09:32:50.360 INFO [stdout] 4: 0x560d5def5d50 - std::panicking::rust_panic_with_hook::h368d37fd53b59464 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:491 Dec 06 09:32:50.360 INFO [stdout] 5: 0x560d5def58d1 - std::panicking::continue_panic_fmt::h1599d634b3be4304 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:398 Dec 06 09:32:50.360 INFO [stdout] 6: 0x560d5def57b5 - rust_begin_unwind Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:325 Dec 06 09:32:50.360 INFO [stdout] 7: 0x560d5df09fdc - core::panicking::panic_fmt::hdc202e6077c95723 Dec 06 09:32:50.360 INFO [stdout] at src/libcore/panicking.rs:95 Dec 06 09:32:50.360 INFO [stdout] 8: 0x560d5ddee5ab - core::result::unwrap_failed::h4d2f8cdb2773c01f Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/macros.rs:26 Dec 06 09:32:50.360 INFO [stdout] 9: 0x560d5ddec4be - >::expect::hdc0dd3b43d0094a5 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/result.rs:835 Dec 06 09:32:50.360 INFO [stdout] 10: 0x560d5de29179 - newick::utils::load_tree_file::h5d21f0aabb4946f3 Dec 06 09:32:50.360 INFO [stdout] at src/utils.rs:7 Dec 06 09:32:50.360 INFO [stdout] 11: 0x560d5ddff40d - newick::tests::tests::test_to_distance_matrix_hard::hc54f0be2c03bc435 Dec 06 09:32:50.360 INFO [stdout] at src/tests.rs:151 Dec 06 09:32:50.360 INFO [stdout] 12: 0x560d5ddff399 - newick::tests::tests::test_to_distance_matrix_hard::{{closure}}::h7f74313806b2f8cd Dec 06 09:32:50.360 INFO [stdout] at src/tests.rs:149 Dec 06 09:32:50.360 INFO [stdout] 13: 0x560d5ddf501d - core::ops::function::FnOnce::call_once::hdf757ccf554c8cb6 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/ops/function.rs:238 Dec 06 09:32:50.360 INFO [stdout] 14: 0x560d5de6c59e - >::call_box::h994167e0fc25f327 Dec 06 09:32:50.360 INFO [stdout] at src/libtest/lib.rs:1471 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/ops/function.rs:238 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:673 Dec 06 09:32:50.360 INFO [stdout] 15: 0x560d5df04419 - __rust_maybe_catch_panic Dec 06 09:32:50.360 INFO [stdout] at src/libpanic_unwind/lib.rs:102 Dec 06 09:32:50.360 INFO [stdout] 16: 0x560d5de644a3 - std::sys_common::backtrace::__rust_begin_short_backtrace::h5d34cfb78512c8c3 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:289 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:398 Dec 06 09:32:50.360 INFO [stdout] at src/libtest/lib.rs:1426 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/sys_common/backtrace.rs:136 Dec 06 09:32:50.360 INFO [stdout] 17: 0x560d5de653c4 - std::panicking::try::do_call::h7a86b6211ebb5e72 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/thread/mod.rs:477 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:319 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:310 Dec 06 09:32:50.360 INFO [stdout] 18: 0x560d5df04419 - __rust_maybe_catch_panic Dec 06 09:32:50.360 INFO [stdout] at src/libpanic_unwind/lib.rs:102 Dec 06 09:32:50.360 INFO [stdout] 19: 0x560d5de6c47c - >::call_box::h877dbe22cb3997f4 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:289 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:398 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/thread/mod.rs:476 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:673 Dec 06 09:32:50.360 INFO [stdout] 20: 0x560d5def83dd - std::sys::unix::thread::Thread::new::thread_start::hea5f7f9c570dc4cd Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:683 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/sys_common/thread.rs:24 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/sys/unix/thread.rs:90 Dec 06 09:32:50.360 INFO [stdout] 21: 0x7f03bf2746b9 - start_thread Dec 06 09:32:50.360 INFO [stdout] 22: 0x7f03bed9441c - clone Dec 06 09:32:50.360 INFO [stdout] 23: 0x0 - Dec 06 09:32:50.360 INFO [stdout] Dec 06 09:32:50.360 INFO [stdout] ---- tests::tests::test_to_distance_matrix_simple stdout ---- Dec 06 09:32:50.360 INFO [stdout] thread 'tests::tests::test_to_distance_matrix_simple' panicked at 'file not found: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/libcore/result.rs:1009:5 Dec 06 09:32:50.360 INFO [stdout] stack backtrace: Dec 06 09:32:50.360 INFO [stdout] 0: 0x560d5def6793 - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h3c2ada0a2db8c5e7 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Dec 06 09:32:50.360 INFO [stdout] 1: 0x560d5def0d78 - std::sys_common::backtrace::_print::h95865c77318e98b7 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/sys_common/backtrace.rs:71 Dec 06 09:32:50.360 INFO [stdout] 2: 0x560d5def5642 - std::panicking::default_hook::{{closure}}::hb3d1f299fcea42e5 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/sys_common/backtrace.rs:59 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:211 Dec 06 09:32:50.360 INFO [stdout] 3: 0x560d5def532c - std::panicking::default_hook::h4eae6f26f73244c8 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:221 Dec 06 09:32:50.360 INFO [stdout] 4: 0x560d5def5d50 - std::panicking::rust_panic_with_hook::h368d37fd53b59464 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:491 Dec 06 09:32:50.360 INFO [stdout] 5: 0x560d5def58d1 - std::panicking::continue_panic_fmt::h1599d634b3be4304 Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:398 Dec 06 09:32:50.360 INFO [stdout] 6: 0x560d5def57b5 - rust_begin_unwind Dec 06 09:32:50.360 INFO [stdout] at src/libstd/panicking.rs:325 Dec 06 09:32:50.360 INFO [stdout] 7: 0x560d5df09fdc - core::panicking::panic_fmt::hdc202e6077c95723 Dec 06 09:32:50.360 INFO [stdout] at src/libcore/panicking.rs:95 Dec 06 09:32:50.360 INFO [stdout] 8: 0x560d5ddee5ab - core::result::unwrap_failed::h4d2f8cdb2773c01f Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/macros.rs:26 Dec 06 09:32:50.360 INFO [stdout] 9: 0x560d5ddec4be - >::expect::hdc0dd3b43d0094a5 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/result.rs:835 Dec 06 09:32:50.360 INFO [stdout] 10: 0x560d5de29179 - newick::utils::load_tree_file::h5d21f0aabb4946f3 Dec 06 09:32:50.360 INFO [stdout] at src/utils.rs:7 Dec 06 09:32:50.360 INFO [stdout] 11: 0x560d5ddff2fd - newick::tests::tests::test_to_distance_matrix_simple::h3249683ef7bcc9ab Dec 06 09:32:50.360 INFO [stdout] at src/tests.rs:143 Dec 06 09:32:50.360 INFO [stdout] 12: 0x560d5ddff289 - newick::tests::tests::test_to_distance_matrix_simple::{{closure}}::h1dda14af37ebc3a7 Dec 06 09:32:50.360 INFO [stdout] at src/tests.rs:141 Dec 06 09:32:50.360 INFO [stdout] 13: 0x560d5ddf4f2d - core::ops::function::FnOnce::call_once::h9c8ed406125b5479 Dec 06 09:32:50.360 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/ops/function.rs:238 Dec 06 09:32:50.360 INFO [stdout] 14: 0x560d5de6c59e - >::call_box::h994167e0fc25f327 Dec 06 09:32:50.361 INFO [stdout] at src/libtest/lib.rs:1471 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libcore/ops/function.rs:238 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:673 Dec 06 09:32:50.361 INFO [stdout] 15: 0x560d5df04419 - __rust_maybe_catch_panic Dec 06 09:32:50.361 INFO [stdout] at src/libpanic_unwind/lib.rs:102 Dec 06 09:32:50.361 INFO [stdout] 16: 0x560d5de644a3 - std::sys_common::backtrace::__rust_begin_short_backtrace::h5d34cfb78512c8c3 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:289 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:398 Dec 06 09:32:50.361 INFO [stdout] at src/libtest/lib.rs:1426 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/sys_common/backtrace.rs:136 Dec 06 09:32:50.361 INFO [stdout] 17: 0x560d5de653c4 - std::panicking::try::do_call::h7a86b6211ebb5e72 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/thread/mod.rs:477 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:319 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:310 Dec 06 09:32:50.361 INFO [stdout] 18: 0x560d5df04419 - __rust_maybe_catch_panic Dec 06 09:32:50.361 INFO [stdout] at src/libpanic_unwind/lib.rs:102 Dec 06 09:32:50.361 INFO [stdout] 19: 0x560d5de6c47c - >::call_box::h877dbe22cb3997f4 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panicking.rs:289 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/panic.rs:398 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/libstd/thread/mod.rs:476 Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:673 Dec 06 09:32:50.361 INFO [stdout] 20: 0x560d5def83dd - std::sys::unix::thread::Thread::new::thread_start::hea5f7f9c570dc4cd Dec 06 09:32:50.361 INFO [stdout] at /rustc/906deae0790bd18681b937fe9a141a3c26cf1855/src/liballoc/boxed.rs:683 Dec 06 09:32:50.361 INFO [stdout] at src/libstd/sys_common/thread.rs:24 Dec 06 09:32:50.361 INFO [stdout] at src/libstd/sys/unix/thread.rs:90 Dec 06 09:32:50.361 INFO [stdout] 21: 0x7f03bf2746b9 - start_thread Dec 06 09:32:50.361 INFO [stdout] 22: 0x7f03bed9441c - clone Dec 06 09:32:50.361 INFO [stdout] 23: 0x0 - Dec 06 09:32:50.361 INFO [stdout] Dec 06 09:32:50.361 INFO [stdout] Dec 06 09:32:50.361 INFO [stdout] failures: Dec 06 09:32:50.361 INFO [stdout] tests::tests::test_load_tree_file Dec 06 09:32:50.361 INFO [stdout] tests::tests::test_to_distance_matrix_hard Dec 06 09:32:50.361 INFO [stdout] tests::tests::test_to_distance_matrix_simple Dec 06 09:32:50.361 INFO [stdout] Dec 06 09:32:50.361 INFO [stdout] test result: FAILED. 9 passed; 3 failed; 0 ignored; 0 measured; 0 filtered out Dec 06 09:32:50.361 INFO [stdout] Dec 06 09:32:50.361 INFO [stderr] error: test failed, to rerun pass '--bin newick' Dec 06 09:32:50.363 INFO [stderr] su: No module specific data is present Dec 06 09:32:50.665 INFO running `"docker" "inspect" "60d44b1157bb00fe9bf862158095f93eb144d070e304d154e41d6464ece90415"` Dec 06 09:32:50.779 INFO running `"docker" "rm" "-f" "60d44b1157bb00fe9bf862158095f93eb144d070e304d154e41d6464ece90415"` Dec 06 09:32:51.036 INFO [stdout] 60d44b1157bb00fe9bf862158095f93eb144d070e304d154e41d6464ece90415