Nov 28 10:38:28.883 INFO checking TuBieJun/stat_mut_sampleratio against master#0b9f19dff1347e29bf4362ab5a8fab84b43023b5 for pr-56074 Nov 28 10:38:28.884 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-56074/worker-6/master#0b9f19dff1347e29bf4362ab5a8fab84b43023b5:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-56074/master#0b9f19dff1347e29bf4362ab5a8fab84b43023b5:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +0b9f19dff1347e29bf4362ab5a8fab84b43023b5-alt check --frozen --all --all-targets" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 28 10:38:29.364 INFO [stdout] 156da9dbe1330597ba478ed98e370fb744984d0882915c32f92cf4d7d25f3c0f Nov 28 10:38:29.364 INFO running `"docker" "start" "-a" "156da9dbe1330597ba478ed98e370fb744984d0882915c32f92cf4d7d25f3c0f"` Nov 28 10:38:31.259 INFO [stderr] usermod: no changes Nov 28 10:38:31.396 INFO [stderr] Checking stat_germline_pos v0.1.0 (/source) Nov 28 10:38:32.646 INFO [stderr] warning: unused import: `SubCommand` Nov 28 10:38:32.647 INFO [stderr] --> src/main.rs:9:22 Nov 28 10:38:32.647 INFO [stderr] | Nov 28 10:38:32.647 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Nov 28 10:38:32.647 INFO [stderr] | ^^^^^^^^^^ Nov 28 10:38:32.647 INFO [stderr] | Nov 28 10:38:32.647 INFO [stderr] = note: #[warn(unused_imports)] on by default Nov 28 10:38:32.647 INFO [stderr] Nov 28 10:38:32.760 INFO [stderr] warning: unused import: `SubCommand` Nov 28 10:38:32.760 INFO [stderr] --> src/main.rs:9:22 Nov 28 10:38:32.760 INFO [stderr] | Nov 28 10:38:32.760 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Nov 28 10:38:32.760 INFO [stderr] | ^^^^^^^^^^ Nov 28 10:38:32.760 INFO [stderr] | Nov 28 10:38:32.760 INFO [stderr] = note: #[warn(unused_imports)] on by default Nov 28 10:38:32.760 INFO [stderr] Nov 28 10:38:32.816 INFO [stderr] warning: variable does not need to be mutable Nov 28 10:38:32.816 INFO [stderr] --> src/main.rs:18:9 Nov 28 10:38:32.816 INFO [stderr] | Nov 28 10:38:32.816 INFO [stderr] 18 | let mut f = File::open(vcf_l) Nov 28 10:38:32.816 INFO [stderr] | ----^ Nov 28 10:38:32.816 INFO [stderr] | | Nov 28 10:38:32.816 INFO [stderr] | help: remove this `mut` Nov 28 10:38:32.836 INFO [stderr] | Nov 28 10:38:32.836 INFO [stderr] = note: #[warn(unused_mut)] on by default Nov 28 10:38:32.836 INFO [stderr] Nov 28 10:38:32.856 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 28 10:38:32.856 INFO [stderr] --> src/main.rs:13:13 Nov 28 10:38:32.856 INFO [stderr] | Nov 28 10:38:32.856 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Nov 28 10:38:32.856 INFO [stderr] | ^^^^^^^^^^ Nov 28 10:38:32.856 INFO [stderr] | Nov 28 10:38:32.856 INFO [stderr] = note: #[warn(non_snake_case)] on by default Nov 28 10:38:32.856 INFO [stderr] Nov 28 10:38:32.856 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 28 10:38:32.856 INFO [stderr] --> src/main.rs:96:53 Nov 28 10:38:32.856 INFO [stderr] | Nov 28 10:38:32.856 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Nov 28 10:38:32.856 INFO [stderr] | ^^^^^^^^^^ Nov 28 10:38:32.856 INFO [stderr] Nov 28 10:38:32.872 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 28 10:38:32.872 INFO [stderr] --> src/main.rs:100:5 Nov 28 10:38:32.872 INFO [stderr] | Nov 28 10:38:32.872 INFO [stderr] 100 | writer.write(header.as_bytes()); Nov 28 10:38:32.872 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 28 10:38:32.872 INFO [stderr] | Nov 28 10:38:32.872 INFO [stderr] = note: #[warn(unused_must_use)] on by default Nov 28 10:38:32.872 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 28 10:38:32.872 INFO [stderr] Nov 28 10:38:32.885 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 28 10:38:32.885 INFO [stderr] --> src/main.rs:112:9 Nov 28 10:38:32.885 INFO [stderr] | Nov 28 10:38:32.885 INFO [stderr] 112 | writer.write(info.as_bytes()); Nov 28 10:38:32.885 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 28 10:38:32.885 INFO [stderr] | Nov 28 10:38:32.885 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 28 10:38:32.885 INFO [stderr] Nov 28 10:38:32.885 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 28 10:38:32.886 INFO [stderr] --> src/main.rs:155:9 Nov 28 10:38:32.886 INFO [stderr] | Nov 28 10:38:32.886 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Nov 28 10:38:32.886 INFO [stderr] | ^^^^^^^^^^^^^^ Nov 28 10:38:32.886 INFO [stderr] Nov 28 10:38:32.924 INFO [stderr] warning: variable does not need to be mutable Nov 28 10:38:32.924 INFO [stderr] --> src/main.rs:18:9 Nov 28 10:38:32.924 INFO [stderr] | Nov 28 10:38:32.924 INFO [stderr] 18 | let mut f = File::open(vcf_l) Nov 28 10:38:32.924 INFO [stderr] | ----^ Nov 28 10:38:32.924 INFO [stderr] | | Nov 28 10:38:32.924 INFO [stderr] | help: remove this `mut` Nov 28 10:38:32.924 INFO [stderr] | Nov 28 10:38:32.924 INFO [stderr] = note: #[warn(unused_mut)] on by default Nov 28 10:38:32.924 INFO [stderr] Nov 28 10:38:32.944 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 28 10:38:32.944 INFO [stderr] --> src/main.rs:13:13 Nov 28 10:38:32.944 INFO [stderr] | Nov 28 10:38:32.944 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Nov 28 10:38:32.944 INFO [stderr] | ^^^^^^^^^^ Nov 28 10:38:32.944 INFO [stderr] | Nov 28 10:38:32.944 INFO [stderr] = note: #[warn(non_snake_case)] on by default Nov 28 10:38:32.944 INFO [stderr] Nov 28 10:38:32.952 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 28 10:38:32.952 INFO [stderr] --> src/main.rs:96:53 Nov 28 10:38:32.952 INFO [stderr] | Nov 28 10:38:32.952 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Nov 28 10:38:32.952 INFO [stderr] | ^^^^^^^^^^ Nov 28 10:38:32.952 INFO [stderr] Nov 28 10:38:32.958 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 28 10:38:32.958 INFO [stderr] --> src/main.rs:100:5 Nov 28 10:38:32.958 INFO [stderr] | Nov 28 10:38:32.958 INFO [stderr] 100 | writer.write(header.as_bytes()); Nov 28 10:38:32.958 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 28 10:38:32.958 INFO [stderr] | Nov 28 10:38:32.958 INFO [stderr] = note: #[warn(unused_must_use)] on by default Nov 28 10:38:32.958 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 28 10:38:32.958 INFO [stderr] Nov 28 10:38:32.958 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 28 10:38:32.958 INFO [stderr] --> src/main.rs:112:9 Nov 28 10:38:32.958 INFO [stderr] | Nov 28 10:38:32.958 INFO [stderr] 112 | writer.write(info.as_bytes()); Nov 28 10:38:32.958 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 28 10:38:32.958 INFO [stderr] | Nov 28 10:38:32.958 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 28 10:38:32.958 INFO [stderr] Nov 28 10:38:32.964 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 28 10:38:32.964 INFO [stderr] --> src/main.rs:155:9 Nov 28 10:38:32.964 INFO [stderr] | Nov 28 10:38:32.964 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Nov 28 10:38:32.964 INFO [stderr] | ^^^^^^^^^^^^^^ Nov 28 10:38:32.964 INFO [stderr] Nov 28 10:38:32.980 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.70s Nov 28 10:38:32.980 INFO [stderr] su: No module specific data is present Nov 28 10:38:34.122 INFO running `"docker" "inspect" "156da9dbe1330597ba478ed98e370fb744984d0882915c32f92cf4d7d25f3c0f"` Nov 28 10:38:34.432 INFO running `"docker" "rm" "-f" "156da9dbe1330597ba478ed98e370fb744984d0882915c32f92cf4d7d25f3c0f"` Nov 28 10:38:34.870 INFO [stdout] 156da9dbe1330597ba478ed98e370fb744984d0882915c32f92cf4d7d25f3c0f