Nov 16 18:53:26.848 INFO testing mttmartin/anneal_predictor against try#2e026d6e5d7621634147ad4c8074f1d964dbb1be for pr-55982
Nov 16 18:53:26.849 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-7/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-7/pr-55982/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +2e026d6e5d7621634147ad4c8074f1d964dbb1be-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 16 18:53:27.493 INFO [stdout] dd1e0a5891f6f7620107e345349692c84ed0d59cc2e3d20413c9b3e5f74f945f
Nov 16 18:53:27.496 INFO running `"docker" "start" "-a" "dd1e0a5891f6f7620107e345349692c84ed0d59cc2e3d20413c9b3e5f74f945f"`
Nov 16 18:53:30.121 INFO [stderr] usermod: no changes
Nov 16 18:53:30.187 INFO [stderr]    Compiling anneal_predictor v0.1.0 (/source)
Nov 16 18:53:30.579 INFO [stderr] warning: method `deltaG_dinucleotide` should have a snake case name such as `delta_g_dinucleotide`
Nov 16 18:53:30.580 INFO [stderr]    --> src/main.rs:8:2
Nov 16 18:53:30.580 INFO [stderr]     |
Nov 16 18:53:30.580 INFO [stderr] 8   |       fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 {
Nov 16 18:53:30.580 INFO [stderr]     |  _____^
Nov 16 18:53:30.580 INFO [stderr] 9   | |         let mut deltaS = 0.0;
Nov 16 18:53:30.580 INFO [stderr] 10  | |         let mut deltaH = 0.0;
Nov 16 18:53:30.580 INFO [stderr] 11  | |
Nov 16 18:53:30.580 INFO [stderr] ...   |
Nov 16 18:53:30.580 INFO [stderr] 279 | |         deltaG
Nov 16 18:53:30.580 INFO [stderr] 280 | |     }
Nov 16 18:53:30.580 INFO [stderr]     | |_____^
Nov 16 18:53:30.580 INFO [stderr]     |
Nov 16 18:53:30.580 INFO [stderr]     = note: #[warn(non_snake_case)] on by default
Nov 16 18:53:30.580 INFO [stderr] 
Nov 16 18:53:30.580 INFO [stderr] warning: variable `deltaS` should have a snake case name such as `delta_s`
Nov 16 18:53:30.580 INFO [stderr]  --> src/main.rs:9:7
Nov 16 18:53:30.580 INFO [stderr]   |
Nov 16 18:53:30.580 INFO [stderr] 9 |         let mut deltaS = 0.0;
Nov 16 18:53:30.580 INFO [stderr]   |             ^^^^^^^^^^
Nov 16 18:53:30.580 INFO [stderr] 
Nov 16 18:53:30.580 INFO [stderr] warning: variable `deltaH` should have a snake case name such as `delta_h`
Nov 16 18:53:30.580 INFO [stderr]   --> src/main.rs:10:7
Nov 16 18:53:30.580 INFO [stderr]    |
Nov 16 18:53:30.580 INFO [stderr] 10 |         let mut deltaH = 0.0;
Nov 16 18:53:30.580 INFO [stderr]    |             ^^^^^^^^^^
Nov 16 18:53:30.580 INFO [stderr] 
Nov 16 18:53:30.580 INFO [stderr] warning: variable `deltaG` should have a snake case name such as `delta_g`
Nov 16 18:53:30.580 INFO [stderr]    --> src/main.rs:278:7
Nov 16 18:53:30.580 INFO [stderr]     |
Nov 16 18:53:30.580 INFO [stderr] 278 |         let deltaG = deltaH - self.temperature * deltaS;
Nov 16 18:53:30.580 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:30.580 INFO [stderr] 
Nov 16 18:53:30.580 INFO [stderr] warning: method `initiation_termination_deltaG` should have a snake case name such as `initiation_termination_delta_g`
Nov 16 18:53:30.586 INFO [stderr]    --> src/main.rs:282:1
Nov 16 18:53:30.586 INFO [stderr]     |
Nov 16 18:53:30.586 INFO [stderr] 282 | / fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 {
Nov 16 18:53:30.586 INFO [stderr] 283 | |     if (template_nucleotide == "A" && oligo_nucleotide == "T") || (template_nucleotide == "T" && oligo_nucleotide == "A") {
Nov 16 18:53:30.586 INFO [stderr] 284 | |         let deltaH = 9.62;
Nov 16 18:53:30.586 INFO [stderr] 285 | |         let deltaS = 17.15/1000.0;
Nov 16 18:53:30.586 INFO [stderr] ...   |
Nov 16 18:53:30.586 INFO [stderr] 296 | |     }
Nov 16 18:53:30.586 INFO [stderr] 297 | | }
Nov 16 18:53:30.586 INFO [stderr]     | |_^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `deltaH` should have a snake case name such as `delta_h`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:284:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 284 |         let deltaH = 9.62;
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `deltaS` should have a snake case name such as `delta_s`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:285:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 285 |         let deltaS = 17.15/1000.0;
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `deltaGinit` should have a snake case name such as `delta_ginit`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:286:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 286 |         let deltaGinit = deltaH - (self.temperature*deltaS);
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `deltaH` should have a snake case name such as `delta_h`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:289:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 289 |         let deltaH = 0.4184;
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `deltaS` should have a snake case name such as `delta_s`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:290:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 290 |         let deltaS = -11.72/1000.0;
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `deltaGinit` should have a snake case name such as `delta_ginit`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:291:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 291 |         let deltaGinit = deltaH - (self.temperature*deltaS);
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: method `calc_deltaG` should have a snake case name such as `calc_delta_g`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:299:1
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 299 | / fn calc_deltaG(&self, template_piece: String) -> f64{
Nov 16 18:53:30.587 INFO [stderr] 300 | |     let mut deltaG = 0.0;
Nov 16 18:53:30.587 INFO [stderr] 301 | |     println!("template piece: {:?}", template_piece);
Nov 16 18:53:30.587 INFO [stderr] 302 | |     for i in 0..(self.oligo.len()-1) {
Nov 16 18:53:30.587 INFO [stderr] ...   |
Nov 16 18:53:30.587 INFO [stderr] 317 | |     deltaG
Nov 16 18:53:30.587 INFO [stderr] 318 | | }
Nov 16 18:53:30.587 INFO [stderr]     | |_^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `deltaG` should have a snake case name such as `delta_g`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:300:6
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 300 |     let mut deltaG = 0.0;
Nov 16 18:53:30.587 INFO [stderr]     |         ^^^^^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `initiation_deltaG` should have a snake case name such as `initiation_delta_g`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:303:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 303 |         let mut initiation_deltaG = 0.0;
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^^^^^^^^^^^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `dinucleotide_deltaG` should have a snake case name such as `dinucleotide_delta_g`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:306:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 306 |         let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone());
Nov 16 18:53:30.587 INFO [stderr]     |             ^^^^^^^^^^^^^^^^^^^^^^^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: method `lowest_deltaG` should have a snake case name such as `lowest_delta_g`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:320:2
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 320 |       fn lowest_deltaG(&self) -> f64 {
Nov 16 18:53:30.587 INFO [stderr]     |  _____^
Nov 16 18:53:30.587 INFO [stderr] 321 | |         let mut lowestDeltaG = 0.0;
Nov 16 18:53:30.587 INFO [stderr] 322 | |         for i in 0..(self.template.len() - self.oligo.len()) {
Nov 16 18:53:30.587 INFO [stderr] 323 | |             let template_piece = self.template[i..(self.oligo.len()+i)].to_string();
Nov 16 18:53:30.587 INFO [stderr] ...   |
Nov 16 18:53:30.587 INFO [stderr] 329 | |         lowestDeltaG
Nov 16 18:53:30.587 INFO [stderr] 330 | |     }
Nov 16 18:53:30.587 INFO [stderr]     | |_____^
Nov 16 18:53:30.587 INFO [stderr] 
Nov 16 18:53:30.587 INFO [stderr] warning: variable `lowestDeltaG` should have a snake case name such as `lowest_delta_g`
Nov 16 18:53:30.587 INFO [stderr]    --> src/main.rs:321:7
Nov 16 18:53:30.587 INFO [stderr]     |
Nov 16 18:53:30.587 INFO [stderr] 321 |         let mut lowestDeltaG = 0.0;
Nov 16 18:53:30.588 INFO [stderr]     |             ^^^^^^^^^^^^^^^^
Nov 16 18:53:30.588 INFO [stderr] 
Nov 16 18:53:30.588 INFO [stderr] warning: variable `currentDeltaG` should have a snake case name such as `current_delta_g`
Nov 16 18:53:30.588 INFO [stderr]    --> src/main.rs:324:8
Nov 16 18:53:30.588 INFO [stderr]     |
Nov 16 18:53:30.588 INFO [stderr] 324 |             let currentDeltaG = self.calc_deltaG(template_piece);
Nov 16 18:53:30.588 INFO [stderr]     |                 ^^^^^^^^^^^^^
Nov 16 18:53:30.588 INFO [stderr] 
Nov 16 18:53:30.588 INFO [stderr] warning: variable `lowest_delta_G` should have a snake case name such as `lowest_delta_g`
Nov 16 18:53:30.588 INFO [stderr]    --> src/main.rs:339:6
Nov 16 18:53:30.588 INFO [stderr]     |
Nov 16 18:53:30.588 INFO [stderr] 339 |     let lowest_delta_G = simulation.lowest_deltaG();
Nov 16 18:53:30.588 INFO [stderr]     |         ^^^^^^^^^^^^^^
Nov 16 18:53:30.588 INFO [stderr] 
Nov 16 18:53:31.224 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1.08s
Nov 16 18:53:31.227 INFO [stderr] su: No module specific data is present
Nov 16 18:53:33.046 INFO running `"docker" "inspect" "dd1e0a5891f6f7620107e345349692c84ed0d59cc2e3d20413c9b3e5f74f945f"`
Nov 16 18:53:33.399 INFO running `"docker" "rm" "-f" "dd1e0a5891f6f7620107e345349692c84ed0d59cc2e3d20413c9b3e5f74f945f"`
Nov 16 18:53:33.787 INFO [stdout] dd1e0a5891f6f7620107e345349692c84ed0d59cc2e3d20413c9b3e5f74f945f
Nov 16 18:53:33.791 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-7/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-7/pr-55982/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +2e026d6e5d7621634147ad4c8074f1d964dbb1be-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 16 18:53:34.175 INFO [stdout] fb3f8c72e57ab1a00dcfd1f615b773ac482e91111eb0c85b73c7f445d7333b1f
Nov 16 18:53:34.179 INFO running `"docker" "start" "-a" "fb3f8c72e57ab1a00dcfd1f615b773ac482e91111eb0c85b73c7f445d7333b1f"`
Nov 16 18:53:35.831 INFO [stderr] usermod: no changes
Nov 16 18:53:35.896 INFO [stderr]    Compiling anneal_predictor v0.1.0 (/source)
Nov 16 18:53:36.463 INFO [stderr] warning: method `deltaG_dinucleotide` should have a snake case name such as `delta_g_dinucleotide`
Nov 16 18:53:36.463 INFO [stderr]    --> src/main.rs:8:2
Nov 16 18:53:36.463 INFO [stderr]     |
Nov 16 18:53:36.463 INFO [stderr] 8   |       fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 {
Nov 16 18:53:36.463 INFO [stderr]     |  _____^
Nov 16 18:53:36.463 INFO [stderr] 9   | |         let mut deltaS = 0.0;
Nov 16 18:53:36.463 INFO [stderr] 10  | |         let mut deltaH = 0.0;
Nov 16 18:53:36.463 INFO [stderr] 11  | |
Nov 16 18:53:36.463 INFO [stderr] ...   |
Nov 16 18:53:36.463 INFO [stderr] 279 | |         deltaG
Nov 16 18:53:36.463 INFO [stderr] 280 | |     }
Nov 16 18:53:36.463 INFO [stderr]     | |_____^
Nov 16 18:53:36.463 INFO [stderr]     |
Nov 16 18:53:36.463 INFO [stderr]     = note: #[warn(non_snake_case)] on by default
Nov 16 18:53:36.463 INFO [stderr] 
Nov 16 18:53:36.463 INFO [stderr] warning: variable `deltaS` should have a snake case name such as `delta_s`
Nov 16 18:53:36.463 INFO [stderr]  --> src/main.rs:9:7
Nov 16 18:53:36.463 INFO [stderr]   |
Nov 16 18:53:36.463 INFO [stderr] 9 |         let mut deltaS = 0.0;
Nov 16 18:53:36.464 INFO [stderr]   |             ^^^^^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaH` should have a snake case name such as `delta_h`
Nov 16 18:53:36.464 INFO [stderr]   --> src/main.rs:10:7
Nov 16 18:53:36.464 INFO [stderr]    |
Nov 16 18:53:36.464 INFO [stderr] 10 |         let mut deltaH = 0.0;
Nov 16 18:53:36.464 INFO [stderr]    |             ^^^^^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaG` should have a snake case name such as `delta_g`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:278:7
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 278 |         let deltaG = deltaH - self.temperature * deltaS;
Nov 16 18:53:36.464 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: method `initiation_termination_deltaG` should have a snake case name such as `initiation_termination_delta_g`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:282:1
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 282 | / fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 {
Nov 16 18:53:36.464 INFO [stderr] 283 | |     if (template_nucleotide == "A" && oligo_nucleotide == "T") || (template_nucleotide == "T" && oligo_nucleotide == "A") {
Nov 16 18:53:36.464 INFO [stderr] 284 | |         let deltaH = 9.62;
Nov 16 18:53:36.464 INFO [stderr] 285 | |         let deltaS = 17.15/1000.0;
Nov 16 18:53:36.464 INFO [stderr] ...   |
Nov 16 18:53:36.464 INFO [stderr] 296 | |     }
Nov 16 18:53:36.464 INFO [stderr] 297 | | }
Nov 16 18:53:36.464 INFO [stderr]     | |_^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaH` should have a snake case name such as `delta_h`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:284:7
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 284 |         let deltaH = 9.62;
Nov 16 18:53:36.464 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaS` should have a snake case name such as `delta_s`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:285:7
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 285 |         let deltaS = 17.15/1000.0;
Nov 16 18:53:36.464 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaGinit` should have a snake case name such as `delta_ginit`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:286:7
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 286 |         let deltaGinit = deltaH - (self.temperature*deltaS);
Nov 16 18:53:36.464 INFO [stderr]     |             ^^^^^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaH` should have a snake case name such as `delta_h`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:289:7
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 289 |         let deltaH = 0.4184;
Nov 16 18:53:36.464 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaS` should have a snake case name such as `delta_s`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:290:7
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 290 |         let deltaS = -11.72/1000.0;
Nov 16 18:53:36.464 INFO [stderr]     |             ^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaGinit` should have a snake case name such as `delta_ginit`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:291:7
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 291 |         let deltaGinit = deltaH - (self.temperature*deltaS);
Nov 16 18:53:36.464 INFO [stderr]     |             ^^^^^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: method `calc_deltaG` should have a snake case name such as `calc_delta_g`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:299:1
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 299 | / fn calc_deltaG(&self, template_piece: String) -> f64{
Nov 16 18:53:36.464 INFO [stderr] 300 | |     let mut deltaG = 0.0;
Nov 16 18:53:36.464 INFO [stderr] 301 | |     println!("template piece: {:?}", template_piece);
Nov 16 18:53:36.464 INFO [stderr] 302 | |     for i in 0..(self.oligo.len()-1) {
Nov 16 18:53:36.464 INFO [stderr] ...   |
Nov 16 18:53:36.464 INFO [stderr] 317 | |     deltaG
Nov 16 18:53:36.464 INFO [stderr] 318 | | }
Nov 16 18:53:36.464 INFO [stderr]     | |_^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.464 INFO [stderr] warning: variable `deltaG` should have a snake case name such as `delta_g`
Nov 16 18:53:36.464 INFO [stderr]    --> src/main.rs:300:6
Nov 16 18:53:36.464 INFO [stderr]     |
Nov 16 18:53:36.464 INFO [stderr] 300 |     let mut deltaG = 0.0;
Nov 16 18:53:36.464 INFO [stderr]     |         ^^^^^^^^^^
Nov 16 18:53:36.464 INFO [stderr] 
Nov 16 18:53:36.465 INFO [stderr] warning: variable `initiation_deltaG` should have a snake case name such as `initiation_delta_g`
Nov 16 18:53:36.465 INFO [stderr]    --> src/main.rs:303:7
Nov 16 18:53:36.465 INFO [stderr]     |
Nov 16 18:53:36.465 INFO [stderr] 303 |         let mut initiation_deltaG = 0.0;
Nov 16 18:53:36.465 INFO [stderr]     |             ^^^^^^^^^^^^^^^^^^^^^
Nov 16 18:53:36.465 INFO [stderr] 
Nov 16 18:53:36.465 INFO [stderr] warning: variable `dinucleotide_deltaG` should have a snake case name such as `dinucleotide_delta_g`
Nov 16 18:53:36.465 INFO [stderr]    --> src/main.rs:306:7
Nov 16 18:53:36.465 INFO [stderr]     |
Nov 16 18:53:36.465 INFO [stderr] 306 |         let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone());
Nov 16 18:53:36.465 INFO [stderr]     |             ^^^^^^^^^^^^^^^^^^^^^^^
Nov 16 18:53:36.465 INFO [stderr] 
Nov 16 18:53:36.465 INFO [stderr] warning: method `lowest_deltaG` should have a snake case name such as `lowest_delta_g`
Nov 16 18:53:36.465 INFO [stderr]    --> src/main.rs:320:2
Nov 16 18:53:36.465 INFO [stderr]     |
Nov 16 18:53:36.465 INFO [stderr] 320 |       fn lowest_deltaG(&self) -> f64 {
Nov 16 18:53:36.465 INFO [stderr]     |  _____^
Nov 16 18:53:36.465 INFO [stderr] 321 | |         let mut lowestDeltaG = 0.0;
Nov 16 18:53:36.465 INFO [stderr] 322 | |         for i in 0..(self.template.len() - self.oligo.len()) {
Nov 16 18:53:36.465 INFO [stderr] 323 | |             let template_piece = self.template[i..(self.oligo.len()+i)].to_string();
Nov 16 18:53:36.465 INFO [stderr] ...   |
Nov 16 18:53:36.465 INFO [stderr] 329 | |         lowestDeltaG
Nov 16 18:53:36.465 INFO [stderr] 330 | |     }
Nov 16 18:53:36.465 INFO [stderr]     | |_____^
Nov 16 18:53:36.465 INFO [stderr] 
Nov 16 18:53:36.465 INFO [stderr] warning: variable `lowestDeltaG` should have a snake case name such as `lowest_delta_g`
Nov 16 18:53:36.465 INFO [stderr]    --> src/main.rs:321:7
Nov 16 18:53:36.465 INFO [stderr]     |
Nov 16 18:53:36.465 INFO [stderr] 321 |         let mut lowestDeltaG = 0.0;
Nov 16 18:53:36.465 INFO [stderr]     |             ^^^^^^^^^^^^^^^^
Nov 16 18:53:36.465 INFO [stderr] 
Nov 16 18:53:36.465 INFO [stderr] warning: variable `currentDeltaG` should have a snake case name such as `current_delta_g`
Nov 16 18:53:36.465 INFO [stderr]    --> src/main.rs:324:8
Nov 16 18:53:36.465 INFO [stderr]     |
Nov 16 18:53:36.465 INFO [stderr] 324 |             let currentDeltaG = self.calc_deltaG(template_piece);
Nov 16 18:53:36.465 INFO [stderr]     |                 ^^^^^^^^^^^^^
Nov 16 18:53:36.465 INFO [stderr] 
Nov 16 18:53:36.465 INFO [stderr] warning: variable `lowest_delta_G` should have a snake case name such as `lowest_delta_g`
Nov 16 18:53:36.465 INFO [stderr]    --> src/main.rs:339:6
Nov 16 18:53:36.465 INFO [stderr]     |
Nov 16 18:53:36.465 INFO [stderr] 339 |     let lowest_delta_G = simulation.lowest_deltaG();
Nov 16 18:53:36.465 INFO [stderr]     |         ^^^^^^^^^^^^^^
Nov 16 18:53:36.465 INFO [stderr] 
Nov 16 18:53:36.465 INFO [stderr] warning: variable `lowest_delta_G` should have a snake case name such as `lowest_delta_g`
Nov 16 18:53:36.465 INFO [stderr]    --> src/main.rs:354:7
Nov 16 18:53:36.465 INFO [stderr]     |
Nov 16 18:53:36.465 INFO [stderr] 354 |         let lowest_delta_G = simulation.lowest_deltaG();
Nov 16 18:53:36.465 INFO [stderr]     |             ^^^^^^^^^^^^^^
Nov 16 18:53:36.465 INFO [stderr] 
Nov 16 18:53:37.309 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1.46s
Nov 16 18:53:37.312 INFO [stderr] su: No module specific data is present
Nov 16 18:53:38.473 INFO running `"docker" "inspect" "fb3f8c72e57ab1a00dcfd1f615b773ac482e91111eb0c85b73c7f445d7333b1f"`
Nov 16 18:53:38.883 INFO running `"docker" "rm" "-f" "fb3f8c72e57ab1a00dcfd1f615b773ac482e91111eb0c85b73c7f445d7333b1f"`
Nov 16 18:53:39.251 INFO [stdout] fb3f8c72e57ab1a00dcfd1f615b773ac482e91111eb0c85b73c7f445d7333b1f