Nov 17 11:05:01.613 INFO testing TuBieJun/stat_mut_sampleratio against try#2e026d6e5d7621634147ad4c8074f1d964dbb1be for pr-55982 Nov 17 11:05:01.614 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-5/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-5/pr-55982/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +2e026d6e5d7621634147ad4c8074f1d964dbb1be-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 17 11:05:02.194 INFO [stdout] a03717423d73f982844390dd8dafccbb6134b587db831dbaabe7c9d178434276 Nov 17 11:05:02.197 INFO running `"docker" "start" "-a" "a03717423d73f982844390dd8dafccbb6134b587db831dbaabe7c9d178434276"` Nov 17 11:05:04.597 INFO [stderr] usermod: no changes Nov 17 11:05:04.715 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Nov 17 11:05:05.711 INFO [stderr] warning: unused import: `SubCommand` Nov 17 11:05:05.712 INFO [stderr] --> src/main.rs:9:22 Nov 17 11:05:05.712 INFO [stderr] | Nov 17 11:05:05.712 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Nov 17 11:05:05.713 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:05.713 INFO [stderr] | Nov 17 11:05:05.713 INFO [stderr] = note: #[warn(unused_imports)] on by default Nov 17 11:05:05.713 INFO [stderr] Nov 17 11:05:05.882 INFO [stderr] warning: variable does not need to be mutable Nov 17 11:05:05.883 INFO [stderr] --> src/main.rs:18:9 Nov 17 11:05:05.883 INFO [stderr] | Nov 17 11:05:05.883 INFO [stderr] 18 | let mut f = File::open(vcf_l) Nov 17 11:05:05.883 INFO [stderr] | ----^ Nov 17 11:05:05.883 INFO [stderr] | | Nov 17 11:05:05.883 INFO [stderr] | help: remove this `mut` Nov 17 11:05:05.883 INFO [stderr] | Nov 17 11:05:05.883 INFO [stderr] = note: #[warn(unused_mut)] on by default Nov 17 11:05:05.883 INFO [stderr] Nov 17 11:05:05.900 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:05.900 INFO [stderr] --> src/main.rs:13:13 Nov 17 11:05:05.900 INFO [stderr] | Nov 17 11:05:05.900 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Nov 17 11:05:05.900 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:05.900 INFO [stderr] | Nov 17 11:05:05.900 INFO [stderr] = note: #[warn(non_snake_case)] on by default Nov 17 11:05:05.900 INFO [stderr] Nov 17 11:05:05.902 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:05.902 INFO [stderr] --> src/main.rs:96:53 Nov 17 11:05:05.902 INFO [stderr] | Nov 17 11:05:05.902 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Nov 17 11:05:05.902 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:05.902 INFO [stderr] Nov 17 11:05:05.909 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:05.909 INFO [stderr] --> src/main.rs:100:5 Nov 17 11:05:05.909 INFO [stderr] | Nov 17 11:05:05.909 INFO [stderr] 100 | writer.write(header.as_bytes()); Nov 17 11:05:05.909 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:05.909 INFO [stderr] | Nov 17 11:05:05.909 INFO [stderr] = note: #[warn(unused_must_use)] on by default Nov 17 11:05:05.909 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:05.909 INFO [stderr] Nov 17 11:05:05.911 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:05.911 INFO [stderr] --> src/main.rs:112:9 Nov 17 11:05:05.911 INFO [stderr] | Nov 17 11:05:05.911 INFO [stderr] 112 | writer.write(info.as_bytes()); Nov 17 11:05:05.911 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:05.911 INFO [stderr] | Nov 17 11:05:05.911 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:05.911 INFO [stderr] Nov 17 11:05:05.911 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:05.911 INFO [stderr] --> src/main.rs:155:9 Nov 17 11:05:05.911 INFO [stderr] | Nov 17 11:05:05.911 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Nov 17 11:05:05.911 INFO [stderr] | ^^^^^^^^^^^^^^ Nov 17 11:05:05.911 INFO [stderr] Nov 17 11:05:08.292 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.66s Nov 17 11:05:08.298 INFO [stderr] su: No module specific data is present Nov 17 11:05:09.369 INFO running `"docker" "inspect" "a03717423d73f982844390dd8dafccbb6134b587db831dbaabe7c9d178434276"` Nov 17 11:05:09.643 INFO running `"docker" "rm" "-f" "a03717423d73f982844390dd8dafccbb6134b587db831dbaabe7c9d178434276"` Nov 17 11:05:09.959 INFO [stdout] a03717423d73f982844390dd8dafccbb6134b587db831dbaabe7c9d178434276 Nov 17 11:05:09.968 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-5/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-5/pr-55982/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +2e026d6e5d7621634147ad4c8074f1d964dbb1be-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 17 11:05:10.502 INFO [stdout] 8ec39b9e424004a2835a7c83382de82518c7f1d056f9ab4df3f6b7da50551065 Nov 17 11:05:10.504 INFO running `"docker" "start" "-a" "8ec39b9e424004a2835a7c83382de82518c7f1d056f9ab4df3f6b7da50551065"` Nov 17 11:05:12.343 INFO [stderr] usermod: no changes Nov 17 11:05:12.423 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Nov 17 11:05:13.307 INFO [stderr] warning: unused import: `SubCommand` Nov 17 11:05:13.308 INFO [stderr] --> src/main.rs:9:22 Nov 17 11:05:13.308 INFO [stderr] | Nov 17 11:05:13.309 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Nov 17 11:05:13.309 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:13.309 INFO [stderr] | Nov 17 11:05:13.310 INFO [stderr] = note: #[warn(unused_imports)] on by default Nov 17 11:05:13.310 INFO [stderr] Nov 17 11:05:13.435 INFO [stderr] warning: variable does not need to be mutable Nov 17 11:05:13.435 INFO [stderr] --> src/main.rs:18:9 Nov 17 11:05:13.435 INFO [stderr] | Nov 17 11:05:13.435 INFO [stderr] 18 | let mut f = File::open(vcf_l) Nov 17 11:05:13.435 INFO [stderr] | ----^ Nov 17 11:05:13.435 INFO [stderr] | | Nov 17 11:05:13.435 INFO [stderr] | help: remove this `mut` Nov 17 11:05:13.437 INFO [stderr] | Nov 17 11:05:13.437 INFO [stderr] = note: #[warn(unused_mut)] on by default Nov 17 11:05:13.437 INFO [stderr] Nov 17 11:05:13.456 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:13.456 INFO [stderr] --> src/main.rs:13:13 Nov 17 11:05:13.456 INFO [stderr] | Nov 17 11:05:13.456 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Nov 17 11:05:13.456 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:13.456 INFO [stderr] | Nov 17 11:05:13.457 INFO [stderr] = note: #[warn(non_snake_case)] on by default Nov 17 11:05:13.457 INFO [stderr] Nov 17 11:05:13.457 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:13.457 INFO [stderr] --> src/main.rs:96:53 Nov 17 11:05:13.457 INFO [stderr] | Nov 17 11:05:13.457 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Nov 17 11:05:13.457 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:13.457 INFO [stderr] Nov 17 11:05:13.465 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:13.465 INFO [stderr] --> src/main.rs:100:5 Nov 17 11:05:13.465 INFO [stderr] | Nov 17 11:05:13.465 INFO [stderr] 100 | writer.write(header.as_bytes()); Nov 17 11:05:13.465 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:13.466 INFO [stderr] | Nov 17 11:05:13.466 INFO [stderr] = note: #[warn(unused_must_use)] on by default Nov 17 11:05:13.466 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:13.466 INFO [stderr] Nov 17 11:05:13.466 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:13.466 INFO [stderr] --> src/main.rs:112:9 Nov 17 11:05:13.466 INFO [stderr] | Nov 17 11:05:13.466 INFO [stderr] 112 | writer.write(info.as_bytes()); Nov 17 11:05:13.468 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:13.468 INFO [stderr] | Nov 17 11:05:13.468 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:13.468 INFO [stderr] Nov 17 11:05:13.468 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:13.468 INFO [stderr] --> src/main.rs:155:9 Nov 17 11:05:13.468 INFO [stderr] | Nov 17 11:05:13.468 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Nov 17 11:05:13.468 INFO [stderr] | ^^^^^^^^^^^^^^ Nov 17 11:05:13.468 INFO [stderr] Nov 17 11:05:13.992 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.63s Nov 17 11:05:13.996 INFO [stderr] su: No module specific data is present Nov 17 11:05:15.350 INFO running `"docker" "inspect" "8ec39b9e424004a2835a7c83382de82518c7f1d056f9ab4df3f6b7da50551065"` Nov 17 11:05:15.736 INFO running `"docker" "rm" "-f" "8ec39b9e424004a2835a7c83382de82518c7f1d056f9ab4df3f6b7da50551065"` Nov 17 11:05:16.111 INFO [stdout] 8ec39b9e424004a2835a7c83382de82518c7f1d056f9ab4df3f6b7da50551065 Nov 17 11:05:16.121 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-5/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-5/pr-55982/try#2e026d6e5d7621634147ad4c8074f1d964dbb1be:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +2e026d6e5d7621634147ad4c8074f1d964dbb1be-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 17 11:05:16.608 INFO [stdout] af74ad6766444ce291a7fa3f0c9b1a4ee53e41d21738cb1331c899c442743f75 Nov 17 11:05:16.613 INFO running `"docker" "start" "-a" "af74ad6766444ce291a7fa3f0c9b1a4ee53e41d21738cb1331c899c442743f75"` Nov 17 11:05:17.839 INFO [stderr] usermod: no changes Nov 17 11:05:17.955 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.09s Nov 17 11:05:17.955 INFO [stderr] Running /target/debug/deps/stat_germline_pos-4207b1fe65fa972f Nov 17 11:05:17.955 INFO [stdout] Nov 17 11:05:17.955 INFO [stdout] running 0 tests Nov 17 11:05:17.955 INFO [stdout] Nov 17 11:05:17.955 INFO [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Nov 17 11:05:17.955 INFO [stdout] Nov 17 11:05:17.959 INFO [stderr] su: No module specific data is present Nov 17 11:05:18.988 INFO running `"docker" "inspect" "af74ad6766444ce291a7fa3f0c9b1a4ee53e41d21738cb1331c899c442743f75"` Nov 17 11:05:19.353 INFO running `"docker" "rm" "-f" "af74ad6766444ce291a7fa3f0c9b1a4ee53e41d21738cb1331c899c442743f75"` Nov 17 11:05:19.648 INFO [stdout] af74ad6766444ce291a7fa3f0c9b1a4ee53e41d21738cb1331c899c442743f75