Nov 17 17:53:15.969 INFO testing xgboost-0.1.2 against master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c for pr-55982 Nov 17 17:53:15.971 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-6/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-6/pr-55982/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6b9b97bd9b704f85f0184f7a213cc4d62bd9654c-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 17 17:53:16.377 INFO [stdout] a8821e8ff9d06dde76f2596c0c909d0f30d7459c2869f6257dc149a4a43b965d Nov 17 17:53:16.378 INFO running `"docker" "start" "-a" "a8821e8ff9d06dde76f2596c0c909d0f30d7459c2869f6257dc149a4a43b965d"` Nov 17 17:53:17.543 INFO [stderr] usermod: no changes Nov 17 17:53:17.749 INFO [stderr] Compiling bindgen v0.36.1 Nov 17 17:53:17.750 INFO [stderr] Compiling peeking_take_while v0.1.2 Nov 17 17:53:17.783 INFO [stderr] Compiling which v1.0.5 Nov 17 17:53:17.783 INFO [stderr] Compiling clang-sys v0.22.0 Nov 17 17:53:17.783 INFO [stderr] Compiling proc-macro2 v0.3.5 Nov 17 17:53:17.783 INFO [stderr] Compiling nom v3.2.1 Nov 17 17:53:17.783 INFO [stderr] Compiling derive_builder_core v0.2.0 Nov 17 17:53:24.075 INFO [stderr] Compiling quote v0.5.2 Nov 17 17:53:28.276 INFO [stderr] Compiling cexpr v0.2.3 Nov 17 17:53:29.643 INFO [stderr] Compiling derive_builder v0.5.1 Nov 17 17:54:00.239 INFO [stderr] Compiling xgboost-sys v0.1.1 Nov 17 17:57:42.219 INFO [stderr] error: failed to run custom build command for `xgboost-sys v0.1.1` Nov 17 17:57:42.219 INFO [stderr] process didn't exit successfully: `/target/debug/build/xgboost-sys-82183623346244bb/build-script-build` (exit code: 101) Nov 17 17:57:42.219 INFO [stderr] --- stdout Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/logging.o src/logging.cc >build/logging.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/logging.cc -o build/logging.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/learner.o src/learner.cc >build/learner.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/learner.cc -o build/learner.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/predictor.o src/predictor/predictor.cc >build/predictor/predictor.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/predictor.cc -o build/predictor/predictor.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/cpu_predictor.o src/predictor/cpu_predictor.cc >build/predictor/cpu_predictor.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/cpu_predictor.cc -o build/predictor/cpu_predictor.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/host_device_vector.o src/common/host_device_vector.cc >build/common/host_device_vector.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/host_device_vector.cc -o build/common/host_device_vector.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/common.o src/common/common.cc >build/common/common.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/common.cc -o build/common/common.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/hist_util.o src/common/hist_util.cc >build/common/hist_util.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/hist_util.cc -o build/common/hist_util.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/metric.o src/metric/metric.cc >build/metric/metric.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/metric.cc -o build/metric/metric.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/rank_metric.o src/metric/rank_metric.cc >build/metric/rank_metric.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/rank_metric.cc -o build/metric/rank_metric.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/elementwise_metric.o src/metric/elementwise_metric.cc >build/metric/elementwise_metric.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/elementwise_metric.cc -o build/metric/elementwise_metric.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/multiclass_metric.o src/metric/multiclass_metric.cc >build/metric/multiclass_metric.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/multiclass_metric.cc -o build/metric/multiclass_metric.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/hinge.o src/objective/hinge.cc >build/objective/hinge.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/hinge.cc -o build/objective/hinge.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/multiclass_obj.o src/objective/multiclass_obj.cc >build/objective/multiclass_obj.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/multiclass_obj.cc -o build/objective/multiclass_obj.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/objective.o src/objective/objective.cc >build/objective/objective.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/objective.cc -o build/objective/objective.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/rank_obj.o src/objective/rank_obj.cc >build/objective/rank_obj.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/rank_obj.cc -o build/objective/rank_obj.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/regression_obj.o src/objective/regression_obj.cc >build/objective/regression_obj.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/regression_obj.cc -o build/objective/regression_obj.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_dmatrix.o src/data/sparse_page_dmatrix.cc >build/data/sparse_page_dmatrix.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_dmatrix.cc -o build/data/sparse_page_dmatrix.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_source.o src/data/sparse_page_source.cc >build/data/sparse_page_source.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_source.cc -o build/data/sparse_page_source.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_writer.o src/data/sparse_page_writer.cc >build/data/sparse_page_writer.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_writer.cc -o build/data/sparse_page_writer.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_csr_source.o src/data/simple_csr_source.cc >build/data/simple_csr_source.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_csr_source.cc -o build/data/simple_csr_source.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/data.o src/data/data.cc >build/data/data.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/data.cc -o build/data/data.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_raw_format.o src/data/sparse_page_raw_format.cc >build/data/sparse_page_raw_format.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_raw_format.cc -o build/data/sparse_page_raw_format.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_dmatrix.o src/data/simple_dmatrix.cc >build/data/simple_dmatrix.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_dmatrix.cc -o build/data/simple_dmatrix.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_prune.o src/tree/updater_prune.cc >build/tree/updater_prune.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_prune.cc -o build/tree/updater_prune.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_updater.o src/tree/tree_updater.cc >build/tree/tree_updater.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_updater.cc -o build/tree/tree_updater.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_histmaker.o src/tree/updater_histmaker.cc >build/tree/updater_histmaker.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_histmaker.cc -o build/tree/updater_histmaker.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_refresh.o src/tree/updater_refresh.cc >build/tree/updater_refresh.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_refresh.cc -o build/tree/updater_refresh.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_model.o src/tree/tree_model.cc >build/tree/tree_model.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_model.cc -o build/tree/tree_model.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_sync.o src/tree/updater_sync.cc >build/tree/updater_sync.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_sync.cc -o build/tree/updater_sync.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/split_evaluator.o src/tree/split_evaluator.cc >build/tree/split_evaluator.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/split_evaluator.cc -o build/tree/split_evaluator.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_skmaker.o src/tree/updater_skmaker.cc >build/tree/updater_skmaker.d Nov 17 17:57:42.219 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_skmaker.cc -o build/tree/updater_skmaker.o Nov 17 17:57:42.219 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_colmaker.o src/tree/updater_colmaker.cc >build/tree/updater_colmaker.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_colmaker.cc -o build/tree/updater_colmaker.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_fast_hist.o src/tree/updater_fast_hist.cc >build/tree/updater_fast_hist.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_fast_hist.cc -o build/tree/updater_fast_hist.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbtree.o src/gbm/gbtree.cc >build/gbm/gbtree.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbtree.cc -o build/gbm/gbtree.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gblinear.o src/gbm/gblinear.cc >build/gbm/gblinear.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gblinear.cc -o build/gbm/gblinear.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbm.o src/gbm/gbm.cc >build/gbm/gbm.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbm.cc -o build/gbm/gbm.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api.o src/c_api/c_api.cc >build/c_api/c_api.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api.cc -o build/c_api/c_api.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api_error.o src/c_api/c_api_error.cc >build/c_api/c_api_error.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api_error.cc -o build/c_api/c_api_error.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/linear_updater.o src/linear/linear_updater.cc >build/linear/linear_updater.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/linear_updater.cc -o build/linear/linear_updater.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_shotgun.o src/linear/updater_shotgun.cc >build/linear/updater_shotgun.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_shotgun.cc -o build/linear/updater_shotgun.o Nov 17 17:57:42.220 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_coordinate.o src/linear/updater_coordinate.cc >build/linear/updater_coordinate.d Nov 17 17:57:42.220 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_coordinate.cc -o build/linear/updater_coordinate.o Nov 17 17:57:42.220 INFO [stderr] cd dmlc-core; "make" libdmlc.a config=/target/debug/build/xgboost-sys-b1b885ffbe05f3ac/out/xgboost/make/config.mk; cd /target/debug/build/xgboost-sys-b1b885ffbe05f3ac/out/xgboost Nov 17 17:57:42.220 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-b1b885ffbe05f3ac/out/xgboost/dmlc-core' Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o line_split.o src/io/line_split.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o indexed_recordio_split.o src/io/indexed_recordio_split.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio_split.o src/io/recordio_split.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o input_split_base.o src/io/input_split_base.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o io.o src/io.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o filesys.o src/io/filesys.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o local_filesys.o src/io/local_filesys.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o data.o src/data.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio.o src/recordio.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o config.o src/config.cc Nov 17 17:57:42.220 INFO [stderr] ar cr libdmlc.a line_split.o indexed_recordio_split.o recordio_split.o input_split_base.o io.o filesys.o local_filesys.o data.o recordio.o config.o Nov 17 17:57:42.220 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-b1b885ffbe05f3ac/out/xgboost/dmlc-core' Nov 17 17:57:42.220 INFO [stderr] cd rabit; "make" lib/librabit.a USE_SSE=1; cd /target/debug/build/xgboost-sys-b1b885ffbe05f3ac/out/xgboost Nov 17 17:57:42.220 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-b1b885ffbe05f3ac/out/xgboost/rabit' Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_base.o src/allreduce_base.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_robust.o src/allreduce_robust.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o engine.o src/engine.cc Nov 17 17:57:42.220 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o c_api.o src/c_api.cc Nov 17 17:57:42.220 INFO [stderr] ar cr lib/librabit.a allreduce_base.o allreduce_robust.o engine.o c_api.o Nov 17 17:57:42.220 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-b1b885ffbe05f3ac/out/xgboost/rabit' Nov 17 17:57:42.220 INFO [stderr] ar crv lib/libxgboost.a build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o Nov 17 17:57:42.220 INFO [stderr] a - build/logging.o Nov 17 17:57:42.220 INFO [stderr] a - build/learner.o Nov 17 17:57:42.220 INFO [stderr] a - build/predictor/predictor.o Nov 17 17:57:42.220 INFO [stderr] a - build/predictor/cpu_predictor.o Nov 17 17:57:42.220 INFO [stderr] a - build/common/host_device_vector.o Nov 17 17:57:42.220 INFO [stderr] a - build/common/common.o Nov 17 17:57:42.220 INFO [stderr] a - build/common/hist_util.o Nov 17 17:57:42.220 INFO [stderr] a - build/metric/metric.o Nov 17 17:57:42.220 INFO [stderr] a - build/metric/rank_metric.o Nov 17 17:57:42.220 INFO [stderr] a - build/metric/elementwise_metric.o Nov 17 17:57:42.220 INFO [stderr] a - build/metric/multiclass_metric.o Nov 17 17:57:42.220 INFO [stderr] a - build/objective/hinge.o Nov 17 17:57:42.220 INFO [stderr] a - build/objective/multiclass_obj.o Nov 17 17:57:42.220 INFO [stderr] a - build/objective/objective.o Nov 17 17:57:42.220 INFO [stderr] a - build/objective/rank_obj.o Nov 17 17:57:42.220 INFO [stderr] a - build/objective/regression_obj.o Nov 17 17:57:42.220 INFO [stderr] a - build/data/sparse_page_dmatrix.o Nov 17 17:57:42.220 INFO [stderr] a - build/data/sparse_page_source.o Nov 17 17:57:42.220 INFO [stderr] a - build/data/sparse_page_writer.o Nov 17 17:57:42.220 INFO [stderr] a - build/data/simple_csr_source.o Nov 17 17:57:42.220 INFO [stderr] a - build/data/data.o Nov 17 17:57:42.220 INFO [stderr] a - build/data/sparse_page_raw_format.o Nov 17 17:57:42.220 INFO [stderr] a - build/data/simple_dmatrix.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/updater_prune.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/tree_updater.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/updater_histmaker.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/updater_refresh.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/tree_model.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/updater_sync.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/split_evaluator.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/updater_skmaker.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/updater_colmaker.o Nov 17 17:57:42.220 INFO [stderr] a - build/tree/updater_fast_hist.o Nov 17 17:57:42.220 INFO [stderr] a - build/gbm/gbtree.o Nov 17 17:57:42.220 INFO [stderr] a - build/gbm/gblinear.o Nov 17 17:57:42.220 INFO [stderr] a - build/gbm/gbm.o Nov 17 17:57:42.221 INFO [stderr] a - build/c_api/c_api.o Nov 17 17:57:42.221 INFO [stderr] a - build/c_api/c_api_error.o Nov 17 17:57:42.221 INFO [stderr] a - build/linear/linear_updater.o Nov 17 17:57:42.221 INFO [stderr] a - build/linear/updater_shotgun.o Nov 17 17:57:42.221 INFO [stderr] a - build/linear/updater_coordinate.o Nov 17 17:57:42.221 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -shared -o lib/libxgboost.so build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Nov 17 17:57:42.221 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/cli_main.o src/cli_main.cc >build/cli_main.d Nov 17 17:57:42.221 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/cli_main.cc -o build/cli_main.o Nov 17 17:57:42.221 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -o xgboost build/cli_main.o build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Nov 17 17:57:42.221 INFO [stderr] Successfully build multi-thread xgboost Nov 17 17:57:42.221 INFO [stderr] Nov 17 17:57:42.221 INFO [stderr] --- stderr Nov 17 17:57:42.221 INFO [stderr] Makefile:31: MAKE [make] - checked OK Nov 17 17:57:42.221 INFO [stderr] src/c_api/c_api.cc: In function 'int XGDMatrixCreateFromDT(void**, const char**, xgboost::bst_ulong, xgboost::bst_ulong, void**, int)': Nov 17 17:57:42.221 INFO [stderr] src/c_api/c_api.cc:621:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] Nov 17 17:57:42.221 INFO [stderr] for (auto j = 0; j < ncol; ++j) { Nov 17 17:57:42.221 INFO [stderr] ^ Nov 17 17:57:42.221 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found Nov 17 17:57:42.221 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found, err: true Nov 17 17:57:42.221 INFO [stderr] thread 'main' panicked at 'Unable to generate bindings.: ()', libcore/result.rs:1009:5 Nov 17 17:57:42.221 INFO [stderr] stack backtrace: Nov 17 17:57:42.221 INFO [stderr] 0: 0x55b9451b8283 - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h1a944b80a560daa8 Nov 17 17:57:42.221 INFO [stderr] at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Nov 17 17:57:42.221 INFO [stderr] 1: 0x55b9451b2a18 - std::sys_common::backtrace::_print::h18f735b4c3a49bdb Nov 17 17:57:42.221 INFO [stderr] at libstd/sys_common/backtrace.rs:71 Nov 17 17:57:42.221 INFO [stderr] 2: 0x55b9451b71f4 - std::panicking::default_hook::{{closure}}::h97ab3548a215c097 Nov 17 17:57:42.221 INFO [stderr] at libstd/sys_common/backtrace.rs:59 Nov 17 17:57:42.221 INFO [stderr] at libstd/panicking.rs:211 Nov 17 17:57:42.221 INFO [stderr] 3: 0x55b9451b6f5d - std::panicking::default_hook::h98c2a01ef734e4b0 Nov 17 17:57:42.221 INFO [stderr] at libstd/panicking.rs:227 Nov 17 17:57:42.221 INFO [stderr] 4: 0x55b9451b7900 - std::panicking::rust_panic_with_hook::hb4b3f28eb79ea752 Nov 17 17:57:42.221 INFO [stderr] at libstd/panicking.rs:476 Nov 17 17:57:42.221 INFO [stderr] 5: 0x55b9451b7481 - std::panicking::continue_panic_fmt::h61fd5a7b1a268752 Nov 17 17:57:42.221 INFO [stderr] at libstd/panicking.rs:390 Nov 17 17:57:42.221 INFO [stderr] 6: 0x55b9451b7365 - rust_begin_unwind Nov 17 17:57:42.221 INFO [stderr] at libstd/panicking.rs:325 Nov 17 17:57:42.221 INFO [stderr] 7: 0x55b9451d108c - core::panicking::panic_fmt::h400423a63e8ecedb Nov 17 17:57:42.221 INFO [stderr] at libcore/panicking.rs:77 Nov 17 17:57:42.221 INFO [stderr] 8: 0x55b944bb27d1 - core::result::unwrap_failed::h361a521803e3ebc1 Nov 17 17:57:42.221 INFO [stderr] at /rustc/6b9b97bd9b704f85f0184f7a213cc4d62bd9654c/src/libcore/macros.rs:26 Nov 17 17:57:42.221 INFO [stderr] 9: 0x55b944bb2448 - >::expect::h35ab34a3f04d4bc9 Nov 17 17:57:42.221 INFO [stderr] at /rustc/6b9b97bd9b704f85f0184f7a213cc4d62bd9654c/src/libcore/result.rs:835 Nov 17 17:57:42.221 INFO [stderr] 10: 0x55b944bb0ad2 - build_script_build::main::he33b259aabab13fc Nov 17 17:57:42.221 INFO [stderr] at /cargo-home/registry/src/github.com-1ecc6299db9ec823/xgboost-sys-0.1.1/build.rs:35 Nov 17 17:57:42.221 INFO [stderr] 11: 0x55b944bb1f9f - std::rt::lang_start::{{closure}}::ha753fd37c0686f2d Nov 17 17:57:42.221 INFO [stderr] at /rustc/6b9b97bd9b704f85f0184f7a213cc4d62bd9654c/src/libstd/rt.rs:74 Nov 17 17:57:42.221 INFO [stderr] 12: 0x55b9451b7302 - std::panicking::try::do_call::h07625587b70304eb Nov 17 17:57:42.221 INFO [stderr] at libstd/rt.rs:59 Nov 17 17:57:42.221 INFO [stderr] at libstd/panicking.rs:310 Nov 17 17:57:42.221 INFO [stderr] 13: 0x55b9451cb069 - __rust_maybe_catch_panic Nov 17 17:57:42.221 INFO [stderr] at libpanic_unwind/lib.rs:102 Nov 17 17:57:42.221 INFO [stderr] 14: 0x55b9451b7cd3 - std::rt::lang_start_internal::h7de6c0ff968baefe Nov 17 17:57:42.221 INFO [stderr] at libstd/panicking.rs:289 Nov 17 17:57:42.221 INFO [stderr] at libstd/panic.rs:398 Nov 17 17:57:42.221 INFO [stderr] at libstd/rt.rs:58 Nov 17 17:57:42.221 INFO [stderr] 15: 0x55b944bb1f78 - std::rt::lang_start::hfd202d61e38b9550 Nov 17 17:57:42.221 INFO [stderr] at /rustc/6b9b97bd9b704f85f0184f7a213cc4d62bd9654c/src/libstd/rt.rs:74 Nov 17 17:57:42.221 INFO [stderr] 16: 0x55b944bb1789 - main Nov 17 17:57:42.221 INFO [stderr] 17: 0x7f984561782f - __libc_start_main Nov 17 17:57:42.221 INFO [stderr] 18: 0x55b944bb0068 - _start Nov 17 17:57:42.221 INFO [stderr] 19: 0x0 - Nov 17 17:57:42.221 INFO [stderr] Nov 17 17:57:42.221 INFO [stderr] su: No module specific data is present Nov 17 17:57:42.786 INFO running `"docker" "inspect" "a8821e8ff9d06dde76f2596c0c909d0f30d7459c2869f6257dc149a4a43b965d"` Nov 17 17:57:43.023 INFO running `"docker" "rm" "-f" "a8821e8ff9d06dde76f2596c0c909d0f30d7459c2869f6257dc149a4a43b965d"` Nov 17 17:57:43.320 INFO [stdout] a8821e8ff9d06dde76f2596c0c909d0f30d7459c2869f6257dc149a4a43b965d