Nov 17 11:05:19.733 INFO testing TuBieJun/stat_mut_sampleratio against master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c for pr-55982 Nov 17 11:05:19.734 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-5/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-5/pr-55982/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6b9b97bd9b704f85f0184f7a213cc4d62bd9654c-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 17 11:05:20.235 INFO [stdout] 737d86b147dded5f95508e17f688ea13548e75837123730a13b48a052953f57e Nov 17 11:05:20.238 INFO running `"docker" "start" "-a" "737d86b147dded5f95508e17f688ea13548e75837123730a13b48a052953f57e"` Nov 17 11:05:22.231 INFO [stderr] usermod: no changes Nov 17 11:05:22.355 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Nov 17 11:05:23.340 INFO [stderr] warning: unused import: `SubCommand` Nov 17 11:05:23.340 INFO [stderr] --> src/main.rs:9:22 Nov 17 11:05:23.340 INFO [stderr] | Nov 17 11:05:23.340 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Nov 17 11:05:23.340 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:23.340 INFO [stderr] | Nov 17 11:05:23.343 INFO [stderr] = note: #[warn(unused_imports)] on by default Nov 17 11:05:23.343 INFO [stderr] Nov 17 11:05:23.450 INFO [stderr] warning: variable does not need to be mutable Nov 17 11:05:23.450 INFO [stderr] --> src/main.rs:18:9 Nov 17 11:05:23.450 INFO [stderr] | Nov 17 11:05:23.450 INFO [stderr] 18 | let mut f = File::open(vcf_l) Nov 17 11:05:23.450 INFO [stderr] | ----^ Nov 17 11:05:23.450 INFO [stderr] | | Nov 17 11:05:23.450 INFO [stderr] | help: remove this `mut` Nov 17 11:05:23.455 INFO [stderr] | Nov 17 11:05:23.455 INFO [stderr] = note: #[warn(unused_mut)] on by default Nov 17 11:05:23.455 INFO [stderr] Nov 17 11:05:23.469 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:23.469 INFO [stderr] --> src/main.rs:13:13 Nov 17 11:05:23.469 INFO [stderr] | Nov 17 11:05:23.469 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Nov 17 11:05:23.469 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:23.469 INFO [stderr] | Nov 17 11:05:23.470 INFO [stderr] = note: #[warn(non_snake_case)] on by default Nov 17 11:05:23.470 INFO [stderr] Nov 17 11:05:23.470 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:23.470 INFO [stderr] --> src/main.rs:96:53 Nov 17 11:05:23.470 INFO [stderr] | Nov 17 11:05:23.470 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Nov 17 11:05:23.470 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:23.470 INFO [stderr] Nov 17 11:05:23.479 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:23.479 INFO [stderr] --> src/main.rs:100:5 Nov 17 11:05:23.479 INFO [stderr] | Nov 17 11:05:23.479 INFO [stderr] 100 | writer.write(header.as_bytes()); Nov 17 11:05:23.479 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:23.479 INFO [stderr] | Nov 17 11:05:23.479 INFO [stderr] = note: #[warn(unused_must_use)] on by default Nov 17 11:05:23.479 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:23.479 INFO [stderr] Nov 17 11:05:23.479 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:23.479 INFO [stderr] --> src/main.rs:112:9 Nov 17 11:05:23.479 INFO [stderr] | Nov 17 11:05:23.479 INFO [stderr] 112 | writer.write(info.as_bytes()); Nov 17 11:05:23.479 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:23.479 INFO [stderr] | Nov 17 11:05:23.479 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:23.479 INFO [stderr] Nov 17 11:05:23.479 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:23.479 INFO [stderr] --> src/main.rs:155:9 Nov 17 11:05:23.479 INFO [stderr] | Nov 17 11:05:23.479 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Nov 17 11:05:23.479 INFO [stderr] | ^^^^^^^^^^^^^^ Nov 17 11:05:23.479 INFO [stderr] Nov 17 11:05:26.090 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.84s Nov 17 11:05:26.099 INFO [stderr] su: No module specific data is present Nov 17 11:05:27.224 INFO running `"docker" "inspect" "737d86b147dded5f95508e17f688ea13548e75837123730a13b48a052953f57e"` Nov 17 11:05:27.597 INFO running `"docker" "rm" "-f" "737d86b147dded5f95508e17f688ea13548e75837123730a13b48a052953f57e"` Nov 17 11:05:27.835 INFO [stdout] 737d86b147dded5f95508e17f688ea13548e75837123730a13b48a052953f57e Nov 17 11:05:27.843 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-5/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-5/pr-55982/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6b9b97bd9b704f85f0184f7a213cc4d62bd9654c-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 17 11:05:28.367 INFO [stdout] 83cfb9137f5861450f9ea13109e56c27dbbbb4cd4f808cfdf8525b0b8bd4353a Nov 17 11:05:28.373 INFO running `"docker" "start" "-a" "83cfb9137f5861450f9ea13109e56c27dbbbb4cd4f808cfdf8525b0b8bd4353a"` Nov 17 11:05:30.047 INFO [stderr] usermod: no changes Nov 17 11:05:30.215 INFO [stderr] Compiling stat_germline_pos v0.1.0 (/source) Nov 17 11:05:31.235 INFO [stderr] warning: unused import: `SubCommand` Nov 17 11:05:31.235 INFO [stderr] --> src/main.rs:9:22 Nov 17 11:05:31.235 INFO [stderr] | Nov 17 11:05:31.235 INFO [stderr] 9 | use clap::{Arg, App, SubCommand}; Nov 17 11:05:31.235 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:31.235 INFO [stderr] | Nov 17 11:05:31.235 INFO [stderr] = note: #[warn(unused_imports)] on by default Nov 17 11:05:31.235 INFO [stderr] Nov 17 11:05:31.361 INFO [stderr] warning: variable does not need to be mutable Nov 17 11:05:31.362 INFO [stderr] --> src/main.rs:18:9 Nov 17 11:05:31.363 INFO [stderr] | Nov 17 11:05:31.363 INFO [stderr] 18 | let mut f = File::open(vcf_l) Nov 17 11:05:31.364 INFO [stderr] | ----^ Nov 17 11:05:31.365 INFO [stderr] | | Nov 17 11:05:31.365 INFO [stderr] | help: remove this `mut` Nov 17 11:05:31.366 INFO [stderr] | Nov 17 11:05:31.367 INFO [stderr] = note: #[warn(unused_mut)] on by default Nov 17 11:05:31.367 INFO [stderr] Nov 17 11:05:31.382 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:31.383 INFO [stderr] --> src/main.rs:13:13 Nov 17 11:05:31.384 INFO [stderr] | Nov 17 11:05:31.384 INFO [stderr] 13 | D_germline:&mut HashMap>) -> u32 { Nov 17 11:05:31.385 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:31.386 INFO [stderr] | Nov 17 11:05:31.386 INFO [stderr] = note: #[warn(non_snake_case)] on by default Nov 17 11:05:31.387 INFO [stderr] Nov 17 11:05:31.391 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:31.392 INFO [stderr] --> src/main.rs:96:53 Nov 17 11:05:31.393 INFO [stderr] | Nov 17 11:05:31.393 INFO [stderr] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { Nov 17 11:05:31.394 INFO [stderr] | ^^^^^^^^^^ Nov 17 11:05:31.394 INFO [stderr] Nov 17 11:05:31.407 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:31.408 INFO [stderr] --> src/main.rs:100:5 Nov 17 11:05:31.408 INFO [stderr] | Nov 17 11:05:31.409 INFO [stderr] 100 | writer.write(header.as_bytes()); Nov 17 11:05:31.410 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:31.410 INFO [stderr] | Nov 17 11:05:31.411 INFO [stderr] = note: #[warn(unused_must_use)] on by default Nov 17 11:05:31.412 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:31.412 INFO [stderr] Nov 17 11:05:31.413 INFO [stderr] warning: unused `std::result::Result` that must be used Nov 17 11:05:31.414 INFO [stderr] --> src/main.rs:112:9 Nov 17 11:05:31.414 INFO [stderr] | Nov 17 11:05:31.415 INFO [stderr] 112 | writer.write(info.as_bytes()); Nov 17 11:05:31.416 INFO [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Nov 17 11:05:31.416 INFO [stderr] | Nov 17 11:05:31.417 INFO [stderr] = note: this `Result` may be an `Err` variant, which should be handled Nov 17 11:05:31.417 INFO [stderr] Nov 17 11:05:31.418 INFO [stderr] warning: variable `D_germline` should have a snake case name such as `d_germline` Nov 17 11:05:31.419 INFO [stderr] --> src/main.rs:155:9 Nov 17 11:05:31.419 INFO [stderr] | Nov 17 11:05:31.420 INFO [stderr] 155 | let mut D_germline:HashMap> = HashMap::new(); Nov 17 11:05:31.421 INFO [stderr] | ^^^^^^^^^^^^^^ Nov 17 11:05:31.421 INFO [stderr] Nov 17 11:05:31.951 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.86s Nov 17 11:05:31.959 INFO [stderr] su: No module specific data is present Nov 17 11:05:33.454 INFO running `"docker" "inspect" "83cfb9137f5861450f9ea13109e56c27dbbbb4cd4f808cfdf8525b0b8bd4353a"` Nov 17 11:05:33.803 INFO running `"docker" "rm" "-f" "83cfb9137f5861450f9ea13109e56c27dbbbb4cd4f808cfdf8525b0b8bd4353a"` Nov 17 11:05:34.135 INFO [stdout] 83cfb9137f5861450f9ea13109e56c27dbbbb4cd4f808cfdf8525b0b8bd4353a Nov 17 11:05:34.145 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55982/worker-5/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-5/pr-55982/master#6b9b97bd9b704f85f0184f7a213cc4d62bd9654c:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6b9b97bd9b704f85f0184f7a213cc4d62bd9654c-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 17 11:05:34.610 INFO [stdout] bf9d6fbc2260048e1eb2bbe2073f1a99664c6f13e4c7624474b5633951b84a10 Nov 17 11:05:34.613 INFO running `"docker" "start" "-a" "bf9d6fbc2260048e1eb2bbe2073f1a99664c6f13e4c7624474b5633951b84a10"` Nov 17 11:05:36.655 INFO [stderr] usermod: no changes Nov 17 11:05:36.804 INFO [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.11s Nov 17 11:05:36.804 INFO [stderr] Running /target/debug/deps/stat_germline_pos-9991f3d7fe1f07ad Nov 17 11:05:36.815 INFO [stdout] Nov 17 11:05:36.816 INFO [stdout] running 0 tests Nov 17 11:05:36.816 INFO [stdout] Nov 17 11:05:36.816 INFO [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out Nov 17 11:05:36.816 INFO [stdout] Nov 17 11:05:36.823 INFO [stderr] su: No module specific data is present Nov 17 11:05:38.065 INFO running `"docker" "inspect" "bf9d6fbc2260048e1eb2bbe2073f1a99664c6f13e4c7624474b5633951b84a10"` Nov 17 11:05:38.455 INFO running `"docker" "rm" "-f" "bf9d6fbc2260048e1eb2bbe2073f1a99664c6f13e4c7624474b5633951b84a10"` Nov 17 11:05:38.867 INFO [stdout] bf9d6fbc2260048e1eb2bbe2073f1a99664c6f13e4c7624474b5633951b84a10