Nov 07 02:46:31.456 INFO checking StephanHeijl/global-supertrees against master#24e66c28980442a48d9458f1a4f9b76cc722dc8a+rustflags=-Dduplicate_associated_type_bindings for pr-55687
Nov 07 02:46:31.458 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55687/worker-7/master#24e66c28980442a48d9458f1a4f9b76cc722dc8a+rustflags=-Dduplicate_associated_type_bindings:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-7/pr-55687/master#24e66c28980442a48d9458f1a4f9b76cc722dc8a+rustflags=-Dduplicate_associated_type_bindings:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +24e66c28980442a48d9458f1a4f9b76cc722dc8a-alt check --frozen --all --all-targets" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dduplicate_associated_type_bindings" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 07 02:46:31.942 INFO blam! 4749d6b0f9893964f41afe7081c9b36c986162caf843226698999761bc4d19e5
Nov 07 02:46:31.944 INFO running `"docker" "start" "-a" "4749d6b0f9893964f41afe7081c9b36c986162caf843226698999761bc4d19e5"`
Nov 07 02:46:33.345 INFO kablam! usermod: no changes
Nov 07 02:46:33.501 INFO kablam!     Checking ndarray v0.11.2
Nov 07 02:46:43.080 INFO kablam!     Checking newick v0.1.0 (/source)
Nov 07 02:46:44.892 INFO kablam! warning: unused import: `std::process`
Nov 07 02:46:44.892 INFO kablam!  --> src/tree.rs:5:5
Nov 07 02:46:44.893 INFO kablam!   |
Nov 07 02:46:44.893 INFO kablam! 5 | use std::process;
Nov 07 02:46:44.893 INFO kablam!   |     ^^^^^^^^^^^^
Nov 07 02:46:44.893 INFO kablam!   |
Nov 07 02:46:44.893 INFO kablam!   = note: #[warn(unused_imports)] on by default
Nov 07 02:46:44.893 INFO kablam! 
Nov 07 02:46:44.912 INFO kablam! warning: unused import: `std::process`
Nov 07 02:46:44.912 INFO kablam!  --> src/tree.rs:5:5
Nov 07 02:46:44.912 INFO kablam!   |
Nov 07 02:46:44.912 INFO kablam! 5 | use std::process;
Nov 07 02:46:44.912 INFO kablam!   |     ^^^^^^^^^^^^
Nov 07 02:46:44.912 INFO kablam!   |
Nov 07 02:46:44.912 INFO kablam!   = note: #[warn(unused_imports)] on by default
Nov 07 02:46:44.912 INFO kablam! 
Nov 07 02:46:45.150 INFO kablam! warning: unused variable: `children`
Nov 07 02:46:45.150 INFO kablam!   --> src/main.rs:33:9
Nov 07 02:46:45.150 INFO kablam!    |
Nov 07 02:46:45.150 INFO kablam! 33 |     let children = parsed_tree.traverse_children();
Nov 07 02:46:45.150 INFO kablam!    |         ^^^^^^^^ help: consider using `_children` instead
Nov 07 02:46:45.150 INFO kablam!    |
Nov 07 02:46:45.151 INFO kablam!    = note: #[warn(unused_variables)] on by default
Nov 07 02:46:45.151 INFO kablam! 
Nov 07 02:46:45.151 INFO kablam! warning: value assigned to `read_mode` is never read
Nov 07 02:46:45.151 INFO kablam!    --> src/tree.rs:148:21
Nov 07 02:46:45.151 INFO kablam!     |
Nov 07 02:46:45.151 INFO kablam! 148 |                     read_mode = "LEAF";
Nov 07 02:46:45.151 INFO kablam!     |                     ^^^^^^^^^
Nov 07 02:46:45.151 INFO kablam!     |
Nov 07 02:46:45.151 INFO kablam!     = note: #[warn(unused_assignments)] on by default
Nov 07 02:46:45.151 INFO kablam! 
Nov 07 02:46:45.156 INFO kablam! warning: unused variable: `new_pair_dest`
Nov 07 02:46:45.156 INFO kablam!    --> src/tree_distance_matrix.rs:138:17
Nov 07 02:46:45.157 INFO kablam!     |
Nov 07 02:46:45.157 INFO kablam! 138 |             let new_pair_dest =
Nov 07 02:46:45.157 INFO kablam!     |                 ^^^^^^^^^^^^^ help: consider using `_new_pair_dest` instead
Nov 07 02:46:45.157 INFO kablam! 
Nov 07 02:46:45.215 INFO kablam! warning: unused variable: `children`
Nov 07 02:46:45.216 INFO kablam!   --> src/main.rs:33:9
Nov 07 02:46:45.216 INFO kablam!    |
Nov 07 02:46:45.217 INFO kablam! 33 |     let children = parsed_tree.traverse_children();
Nov 07 02:46:45.217 INFO kablam!    |         ^^^^^^^^ help: consider using `_children` instead
Nov 07 02:46:45.217 INFO kablam!    |
Nov 07 02:46:45.217 INFO kablam!    = note: #[warn(unused_variables)] on by default
Nov 07 02:46:45.218 INFO kablam! 
Nov 07 02:46:45.218 INFO kablam! warning: value assigned to `read_mode` is never read
Nov 07 02:46:45.218 INFO kablam!    --> src/tree.rs:148:21
Nov 07 02:46:45.219 INFO kablam!     |
Nov 07 02:46:45.219 INFO kablam! 148 |                     read_mode = "LEAF";
Nov 07 02:46:45.219 INFO kablam!     |                     ^^^^^^^^^
Nov 07 02:46:45.220 INFO kablam!     |
Nov 07 02:46:45.220 INFO kablam!     = note: #[warn(unused_assignments)] on by default
Nov 07 02:46:45.220 INFO kablam! 
Nov 07 02:46:45.220 INFO kablam! warning: unused variable: `new_pair_dest`
Nov 07 02:46:45.221 INFO kablam!    --> src/tree_distance_matrix.rs:138:17
Nov 07 02:46:45.221 INFO kablam!     |
Nov 07 02:46:45.221 INFO kablam! 138 |             let new_pair_dest =
Nov 07 02:46:45.222 INFO kablam!     |                 ^^^^^^^^^^^^^ help: consider using `_new_pair_dest` instead
Nov 07 02:46:45.222 INFO kablam! 
Nov 07 02:46:45.249 INFO kablam! warning: method is never used: `calculate_q_matrix`
Nov 07 02:46:45.249 INFO kablam!   --> src/tree_distance_matrix.rs:14:5
Nov 07 02:46:45.250 INFO kablam!    |
Nov 07 02:46:45.250 INFO kablam! 14 |     pub fn calculate_q_matrix(dm : &Array2<f64>) -> Array2<f64> {
Nov 07 02:46:45.250 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 07 02:46:45.251 INFO kablam!    |
Nov 07 02:46:45.251 INFO kablam!    = note: #[warn(dead_code)] on by default
Nov 07 02:46:45.251 INFO kablam! 
Nov 07 02:46:45.252 INFO kablam! warning: method is never used: `calculate_pair_distance_matrix`
Nov 07 02:46:45.252 INFO kablam!   --> src/tree_distance_matrix.rs:28:5
Nov 07 02:46:45.252 INFO kablam!    |
Nov 07 02:46:45.253 INFO kablam! 28 |     pub fn calculate_pair_distance_matrix(i : usize, j : usize, dm : &Array2<f64>) -> Array2<f64> {
Nov 07 02:46:45.253 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 07 02:46:45.260 INFO kablam! 
Nov 07 02:46:45.261 INFO kablam! warning: method is never used: `calculate_new_leaf_distances`
Nov 07 02:46:45.261 INFO kablam!   --> src/tree_distance_matrix.rs:66:5
Nov 07 02:46:45.261 INFO kablam!    |
Nov 07 02:46:45.261 INFO kablam! 66 |     pub fn calculate_new_leaf_distances(f : usize, g : usize, dm : &Array2<f64>) -> (f64, f64) {
Nov 07 02:46:45.262 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 07 02:46:45.262 INFO kablam! 
Nov 07 02:46:45.262 INFO kablam! warning: method is never used: `find_min_matrix_ne`
Nov 07 02:46:45.263 INFO kablam!   --> src/tree_distance_matrix.rs:77:5
Nov 07 02:46:45.263 INFO kablam!    |
Nov 07 02:46:45.263 INFO kablam! 77 |     pub fn find_min_matrix_ne(matrix : Array2<f64>) -> [usize; 2] {
Nov 07 02:46:45.264 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 07 02:46:45.264 INFO kablam! 
Nov 07 02:46:45.264 INFO kablam! warning: method is never used: `neighbour_joining`
Nov 07 02:46:45.264 INFO kablam!   --> src/tree_distance_matrix.rs:96:5
Nov 07 02:46:45.265 INFO kablam!    |
Nov 07 02:46:45.265 INFO kablam! 96 |     pub fn neighbour_joining(&self) -> Tree {
Nov 07 02:46:45.265 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 07 02:46:45.266 INFO kablam! 
Nov 07 02:46:45.396 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 12.01s
Nov 07 02:46:45.397 INFO kablam! su: No module specific data is present
Nov 07 02:46:46.160 INFO running `"docker" "rm" "-f" "4749d6b0f9893964f41afe7081c9b36c986162caf843226698999761bc4d19e5"`
Nov 07 02:46:46.572 INFO blam! 4749d6b0f9893964f41afe7081c9b36c986162caf843226698999761bc4d19e5