Nov 09 17:51:00.704 INFO checking StephanHeijl/global-supertrees against try#dc13be39fae8d4c607889b27de374b52586485a3 for pr-55632
Nov 09 17:51:00.704 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55632/worker-7/try#dc13be39fae8d4c607889b27de374b52586485a3:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-7/pr-55632/try#dc13be39fae8d4c607889b27de374b52586485a3:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +dc13be39fae8d4c607889b27de374b52586485a3-alt check --frozen --all --all-targets" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 09 17:51:01.137 INFO blam! cf9c6530b8e34db29832772ca46168fda5c54c1cb8a0c18d670809b1c3976e30
Nov 09 17:51:01.140 INFO running `"docker" "start" "-a" "cf9c6530b8e34db29832772ca46168fda5c54c1cb8a0c18d670809b1c3976e30"`
Nov 09 17:51:02.033 INFO kablam! usermod: no changes
Nov 09 17:51:02.139 INFO kablam!     Checking num-complex v0.1.43
Nov 09 17:51:03.337 INFO kablam!     Checking ndarray v0.11.2
Nov 09 17:51:12.244 INFO kablam!     Checking newick v0.1.0 (/source)
Nov 09 17:51:13.240 INFO kablam! warning: unused import: `std::process`
Nov 09 17:51:13.241 INFO kablam!  --> src/tree.rs:5:5
Nov 09 17:51:13.241 INFO kablam!   |
Nov 09 17:51:13.241 INFO kablam! 5 | use std::process;
Nov 09 17:51:13.241 INFO kablam!   |     ^^^^^^^^^^^^
Nov 09 17:51:13.242 INFO kablam!   |
Nov 09 17:51:13.242 INFO kablam!   = note: #[warn(unused_imports)] on by default
Nov 09 17:51:13.242 INFO kablam! 
Nov 09 17:51:13.242 INFO kablam! warning: unnecessary parentheses around function argument
Nov 09 17:51:13.242 INFO kablam!    --> src/tree_distance_matrix.rs:312:17
Nov 09 17:51:13.242 INFO kablam!     |
Nov 09 17:51:13.243 INFO kablam! 312 |                 (s * max_size as usize),
Nov 09 17:51:13.243 INFO kablam!     |                 ^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
Nov 09 17:51:13.243 INFO kablam!     |
Nov 09 17:51:13.243 INFO kablam!     = note: #[warn(unused_parens)] on by default
Nov 09 17:51:13.243 INFO kablam! 
Nov 09 17:51:13.243 INFO kablam! warning: unnecessary parentheses around function argument
Nov 09 17:51:13.244 INFO kablam!    --> src/tree_distance_matrix.rs:313:17
Nov 09 17:51:13.244 INFO kablam!     |
Nov 09 17:51:13.244 INFO kablam! 313 |                 ((s+1) * max_size as usize)
Nov 09 17:51:13.244 INFO kablam!     |                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
Nov 09 17:51:13.244 INFO kablam! 
Nov 09 17:51:13.279 INFO kablam! warning: unused import: `std::process`
Nov 09 17:51:13.279 INFO kablam!  --> src/tree.rs:5:5
Nov 09 17:51:13.279 INFO kablam!   |
Nov 09 17:51:13.279 INFO kablam! 5 | use std::process;
Nov 09 17:51:13.279 INFO kablam!   |     ^^^^^^^^^^^^
Nov 09 17:51:13.279 INFO kablam!   |
Nov 09 17:51:13.279 INFO kablam!   = note: #[warn(unused_imports)] on by default
Nov 09 17:51:13.279 INFO kablam! 
Nov 09 17:51:13.280 INFO kablam! warning: unnecessary parentheses around function argument
Nov 09 17:51:13.280 INFO kablam!    --> src/tree_distance_matrix.rs:312:17
Nov 09 17:51:13.280 INFO kablam!     |
Nov 09 17:51:13.280 INFO kablam! 312 |                 (s * max_size as usize),
Nov 09 17:51:13.280 INFO kablam!     |                 ^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
Nov 09 17:51:13.280 INFO kablam!     |
Nov 09 17:51:13.280 INFO kablam!     = note: #[warn(unused_parens)] on by default
Nov 09 17:51:13.280 INFO kablam! 
Nov 09 17:51:13.280 INFO kablam! warning: unnecessary parentheses around function argument
Nov 09 17:51:13.280 INFO kablam!    --> src/tree_distance_matrix.rs:313:17
Nov 09 17:51:13.280 INFO kablam!     |
Nov 09 17:51:13.280 INFO kablam! 313 |                 ((s+1) * max_size as usize)
Nov 09 17:51:13.281 INFO kablam!     |                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
Nov 09 17:51:13.281 INFO kablam! 
Nov 09 17:51:13.379 INFO kablam! warning: unused variable: `children`
Nov 09 17:51:13.380 INFO kablam!   --> src/main.rs:34:9
Nov 09 17:51:13.380 INFO kablam!    |
Nov 09 17:51:13.412 INFO kablam! 34 |     let children = parsed_tree.traverse_children();
Nov 09 17:51:13.412 INFO kablam!    |         ^^^^^^^^ help: consider using `_children` instead
Nov 09 17:51:13.412 INFO kablam!    |
Nov 09 17:51:13.412 INFO kablam!    = note: #[warn(unused_variables)] on by default
Nov 09 17:51:13.412 INFO kablam! 
Nov 09 17:51:13.412 INFO kablam! warning: value assigned to `read_mode` is never read
Nov 09 17:51:13.412 INFO kablam!    --> src/tree.rs:148:21
Nov 09 17:51:13.412 INFO kablam!     |
Nov 09 17:51:13.412 INFO kablam! 148 |                     read_mode = "LEAF";
Nov 09 17:51:13.412 INFO kablam!     |                     ^^^^^^^^^
Nov 09 17:51:13.412 INFO kablam!     |
Nov 09 17:51:13.412 INFO kablam!     = note: #[warn(unused_assignments)] on by default
Nov 09 17:51:13.412 INFO kablam! 
Nov 09 17:51:13.412 INFO kablam! warning: unused variable: `new_pair_dest`
Nov 09 17:51:13.412 INFO kablam!    --> src/tree_distance_matrix.rs:138:17
Nov 09 17:51:13.412 INFO kablam!     |
Nov 09 17:51:13.412 INFO kablam! 138 |             let new_pair_dest =
Nov 09 17:51:13.412 INFO kablam!     |                 ^^^^^^^^^^^^^ help: consider using `_new_pair_dest` instead
Nov 09 17:51:13.412 INFO kablam! 
Nov 09 17:51:13.442 INFO kablam! warning: variable does not need to be mutable
Nov 09 17:51:13.443 INFO kablam!    --> src/tree_distance_matrix.rs:319:13
Nov 09 17:51:13.443 INFO kablam!     |
Nov 09 17:51:13.443 INFO kablam! 319 |         let mut distance_matrix : Array2<f64 >= Array2::zeros((2, 2));
Nov 09 17:51:13.443 INFO kablam!     |             ----^^^^^^^^^^^^^^^
Nov 09 17:51:13.443 INFO kablam!     |             |
Nov 09 17:51:13.443 INFO kablam!     |             help: remove this `mut`
Nov 09 17:51:13.443 INFO kablam!     |
Nov 09 17:51:13.443 INFO kablam!     = note: #[warn(unused_mut)] on by default
Nov 09 17:51:13.443 INFO kablam! 
Nov 09 17:51:13.444 INFO kablam! warning: method is never used: `calculate_q_matrix`
Nov 09 17:51:13.444 INFO kablam!   --> src/tree_distance_matrix.rs:14:5
Nov 09 17:51:13.444 INFO kablam!    |
Nov 09 17:51:13.444 INFO kablam! 14 |     pub fn calculate_q_matrix(dm : &Array2<f64>) -> Array2<f64> {
Nov 09 17:51:13.444 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 09 17:51:13.444 INFO kablam!    |
Nov 09 17:51:13.444 INFO kablam!    = note: #[warn(dead_code)] on by default
Nov 09 17:51:13.444 INFO kablam! 
Nov 09 17:51:13.444 INFO kablam! warning: method is never used: `calculate_pair_distance_matrix`
Nov 09 17:51:13.444 INFO kablam!   --> src/tree_distance_matrix.rs:28:5
Nov 09 17:51:13.444 INFO kablam!    |
Nov 09 17:51:13.444 INFO kablam! 28 |     pub fn calculate_pair_distance_matrix(i : usize, j : usize, dm : &Array2<f64>) -> Array2<f64> {
Nov 09 17:51:13.444 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 09 17:51:13.444 INFO kablam! 
Nov 09 17:51:13.444 INFO kablam! warning: method is never used: `calculate_new_leaf_distances`
Nov 09 17:51:13.444 INFO kablam!   --> src/tree_distance_matrix.rs:66:5
Nov 09 17:51:13.444 INFO kablam!    |
Nov 09 17:51:13.444 INFO kablam! 66 |     pub fn calculate_new_leaf_distances(f : usize, g : usize, dm : &Array2<f64>) -> (f64, f64) {
Nov 09 17:51:13.444 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 09 17:51:13.444 INFO kablam! 
Nov 09 17:51:13.444 INFO kablam! warning: method is never used: `find_min_matrix_ne`
Nov 09 17:51:13.444 INFO kablam!   --> src/tree_distance_matrix.rs:77:5
Nov 09 17:51:13.444 INFO kablam!    |
Nov 09 17:51:13.444 INFO kablam! 77 |     pub fn find_min_matrix_ne(matrix : Array2<f64>) -> [usize; 2] {
Nov 09 17:51:13.444 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 09 17:51:13.444 INFO kablam! 
Nov 09 17:51:13.444 INFO kablam! warning: method is never used: `neighbour_joining`
Nov 09 17:51:13.444 INFO kablam!   --> src/tree_distance_matrix.rs:96:5
Nov 09 17:51:13.444 INFO kablam!    |
Nov 09 17:51:13.444 INFO kablam! 96 |     pub fn neighbour_joining(&self) -> Tree {
Nov 09 17:51:13.444 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 09 17:51:13.444 INFO kablam! 
Nov 09 17:51:13.548 INFO kablam! warning: unused variable: `children`
Nov 09 17:51:13.548 INFO kablam!   --> src/main.rs:34:9
Nov 09 17:51:13.548 INFO kablam!    |
Nov 09 17:51:13.548 INFO kablam! 34 |     let children = parsed_tree.traverse_children();
Nov 09 17:51:13.549 INFO kablam!    |         ^^^^^^^^ help: consider using `_children` instead
Nov 09 17:51:13.549 INFO kablam!    |
Nov 09 17:51:13.549 INFO kablam!    = note: #[warn(unused_variables)] on by default
Nov 09 17:51:13.549 INFO kablam! 
Nov 09 17:51:13.549 INFO kablam! warning: value assigned to `read_mode` is never read
Nov 09 17:51:13.550 INFO kablam!    --> src/tree.rs:148:21
Nov 09 17:51:13.550 INFO kablam!     |
Nov 09 17:51:13.550 INFO kablam! 148 |                     read_mode = "LEAF";
Nov 09 17:51:13.550 INFO kablam!     |                     ^^^^^^^^^
Nov 09 17:51:13.550 INFO kablam!     |
Nov 09 17:51:13.550 INFO kablam!     = note: #[warn(unused_assignments)] on by default
Nov 09 17:51:13.551 INFO kablam! 
Nov 09 17:51:13.551 INFO kablam! warning: unused variable: `new_pair_dest`
Nov 09 17:51:13.551 INFO kablam!    --> src/tree_distance_matrix.rs:138:17
Nov 09 17:51:13.551 INFO kablam!     |
Nov 09 17:51:13.551 INFO kablam! 138 |             let new_pair_dest =
Nov 09 17:51:13.552 INFO kablam!     |                 ^^^^^^^^^^^^^ help: consider using `_new_pair_dest` instead
Nov 09 17:51:13.552 INFO kablam! 
Nov 09 17:51:13.649 INFO kablam! warning: variable does not need to be mutable
Nov 09 17:51:13.649 INFO kablam!    --> src/tree_distance_matrix.rs:319:13
Nov 09 17:51:13.649 INFO kablam!     |
Nov 09 17:51:13.649 INFO kablam! 319 |         let mut distance_matrix : Array2<f64 >= Array2::zeros((2, 2));
Nov 09 17:51:13.649 INFO kablam!     |             ----^^^^^^^^^^^^^^^
Nov 09 17:51:13.649 INFO kablam!     |             |
Nov 09 17:51:13.649 INFO kablam!     |             help: remove this `mut`
Nov 09 17:51:13.649 INFO kablam!     |
Nov 09 17:51:13.649 INFO kablam!     = note: #[warn(unused_mut)] on by default
Nov 09 17:51:13.649 INFO kablam! 
Nov 09 17:51:13.655 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 11.60s
Nov 09 17:51:13.660 INFO kablam! su: No module specific data is present
Nov 09 17:51:13.982 INFO running `"docker" "rm" "-f" "cf9c6530b8e34db29832772ca46168fda5c54c1cb8a0c18d670809b1c3976e30"`
Nov 09 17:51:14.134 INFO blam! cf9c6530b8e34db29832772ca46168fda5c54c1cb8a0c18d670809b1c3976e30