Nov 28 07:06:20.918 INFO documenting xgboost-sys-0.1.1 against master#6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb for pr-55318 Nov 28 07:06:20.918 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55318/worker-4/master#6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-4/pr-55318/master#6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb-alt doc --frozen --no-deps --document-private-items" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Nov 28 07:06:21.103 INFO [stdout] 6ed1d9d9d3b7501630d9d773f5687e255b0ce0dde9b118a2081cdd20411a64cc Nov 28 07:06:21.109 INFO running `"docker" "start" "-a" "6ed1d9d9d3b7501630d9d773f5687e255b0ce0dde9b118a2081cdd20411a64cc"` Nov 28 07:06:21.579 INFO [stderr] usermod: no changes Nov 28 07:06:21.795 INFO [stderr] Compiling bindgen v0.36.1 Nov 28 07:06:21.799 INFO [stderr] Compiling clang-sys v0.22.0 Nov 28 07:06:21.799 INFO [stderr] Compiling regex-syntax v0.5.6 Nov 28 07:06:21.802 INFO [stderr] Compiling humantime v1.2.0 Nov 28 07:06:21.802 INFO [stderr] Compiling memchr v2.1.1 Nov 28 07:06:21.802 INFO [stderr] Compiling memchr v1.0.2 Nov 28 07:06:21.802 INFO [stderr] Compiling atty v0.2.11 Nov 28 07:06:21.802 INFO [stderr] Compiling which v1.0.5 Nov 28 07:06:23.359 INFO [stderr] Compiling libloading v0.5.0 Nov 28 07:06:24.595 INFO [stderr] Compiling clap v2.32.0 Nov 28 07:06:25.028 INFO [stderr] Compiling nom v3.2.1 Nov 28 07:06:27.247 INFO [stderr] Compiling aho-corasick v0.6.9 Nov 28 07:06:29.343 INFO [stderr] Compiling regex v1.0.6 Nov 28 07:06:39.015 INFO [stderr] Compiling cexpr v0.2.3 Nov 28 07:06:54.217 INFO [stderr] Compiling env_logger v0.5.13 Nov 28 07:07:08.283 INFO [stderr] Compiling regex v0.2.11 Nov 28 07:07:39.142 INFO [stderr] Compiling xgboost-sys v0.1.1 (/source) Nov 28 07:11:21.552 INFO [stderr] error: failed to run custom build command for `xgboost-sys v0.1.1 (/source)` Nov 28 07:11:21.553 INFO [stderr] process didn't exit successfully: `/target/debug/build/xgboost-sys-2199f032cc703b76/build-script-build` (exit code: 101) Nov 28 07:11:21.553 INFO [stderr] --- stdout Nov 28 07:11:21.553 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/logging.o src/logging.cc >build/logging.d Nov 28 07:11:21.553 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/logging.cc -o build/logging.o Nov 28 07:11:21.554 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/learner.o src/learner.cc >build/learner.d Nov 28 07:11:21.554 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/learner.cc -o build/learner.o Nov 28 07:11:21.554 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/predictor.o src/predictor/predictor.cc >build/predictor/predictor.d Nov 28 07:11:21.555 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/predictor.cc -o build/predictor/predictor.o Nov 28 07:11:21.555 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/cpu_predictor.o src/predictor/cpu_predictor.cc >build/predictor/cpu_predictor.d Nov 28 07:11:21.555 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/cpu_predictor.cc -o build/predictor/cpu_predictor.o Nov 28 07:11:21.556 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/host_device_vector.o src/common/host_device_vector.cc >build/common/host_device_vector.d Nov 28 07:11:21.556 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/host_device_vector.cc -o build/common/host_device_vector.o Nov 28 07:11:21.556 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/common.o src/common/common.cc >build/common/common.d Nov 28 07:11:21.557 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/common.cc -o build/common/common.o Nov 28 07:11:21.557 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/hist_util.o src/common/hist_util.cc >build/common/hist_util.d Nov 28 07:11:21.557 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/hist_util.cc -o build/common/hist_util.o Nov 28 07:11:21.557 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/metric.o src/metric/metric.cc >build/metric/metric.d Nov 28 07:11:21.558 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/metric.cc -o build/metric/metric.o Nov 28 07:11:21.558 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/rank_metric.o src/metric/rank_metric.cc >build/metric/rank_metric.d Nov 28 07:11:21.558 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/rank_metric.cc -o build/metric/rank_metric.o Nov 28 07:11:21.563 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/elementwise_metric.o src/metric/elementwise_metric.cc >build/metric/elementwise_metric.d Nov 28 07:11:21.563 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/elementwise_metric.cc -o build/metric/elementwise_metric.o Nov 28 07:11:21.563 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/multiclass_metric.o src/metric/multiclass_metric.cc >build/metric/multiclass_metric.d Nov 28 07:11:21.564 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/multiclass_metric.cc -o build/metric/multiclass_metric.o Nov 28 07:11:21.564 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/hinge.o src/objective/hinge.cc >build/objective/hinge.d Nov 28 07:11:21.564 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/hinge.cc -o build/objective/hinge.o Nov 28 07:11:21.564 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/multiclass_obj.o src/objective/multiclass_obj.cc >build/objective/multiclass_obj.d Nov 28 07:11:21.564 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/multiclass_obj.cc -o build/objective/multiclass_obj.o Nov 28 07:11:21.565 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/objective.o src/objective/objective.cc >build/objective/objective.d Nov 28 07:11:21.565 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/objective.cc -o build/objective/objective.o Nov 28 07:11:21.565 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/rank_obj.o src/objective/rank_obj.cc >build/objective/rank_obj.d Nov 28 07:11:21.565 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/rank_obj.cc -o build/objective/rank_obj.o Nov 28 07:11:21.566 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/regression_obj.o src/objective/regression_obj.cc >build/objective/regression_obj.d Nov 28 07:11:21.566 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/regression_obj.cc -o build/objective/regression_obj.o Nov 28 07:11:21.566 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_dmatrix.o src/data/sparse_page_dmatrix.cc >build/data/sparse_page_dmatrix.d Nov 28 07:11:21.566 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_dmatrix.cc -o build/data/sparse_page_dmatrix.o Nov 28 07:11:21.567 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_source.o src/data/sparse_page_source.cc >build/data/sparse_page_source.d Nov 28 07:11:21.567 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_source.cc -o build/data/sparse_page_source.o Nov 28 07:11:21.567 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_writer.o src/data/sparse_page_writer.cc >build/data/sparse_page_writer.d Nov 28 07:11:21.567 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_writer.cc -o build/data/sparse_page_writer.o Nov 28 07:11:21.568 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_csr_source.o src/data/simple_csr_source.cc >build/data/simple_csr_source.d Nov 28 07:11:21.568 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_csr_source.cc -o build/data/simple_csr_source.o Nov 28 07:11:21.568 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/data.o src/data/data.cc >build/data/data.d Nov 28 07:11:21.568 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/data.cc -o build/data/data.o Nov 28 07:11:21.569 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_raw_format.o src/data/sparse_page_raw_format.cc >build/data/sparse_page_raw_format.d Nov 28 07:11:21.569 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_raw_format.cc -o build/data/sparse_page_raw_format.o Nov 28 07:11:21.569 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_dmatrix.o src/data/simple_dmatrix.cc >build/data/simple_dmatrix.d Nov 28 07:11:21.569 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_dmatrix.cc -o build/data/simple_dmatrix.o Nov 28 07:11:21.570 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_prune.o src/tree/updater_prune.cc >build/tree/updater_prune.d Nov 28 07:11:21.570 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_prune.cc -o build/tree/updater_prune.o Nov 28 07:11:21.570 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_updater.o src/tree/tree_updater.cc >build/tree/tree_updater.d Nov 28 07:11:21.570 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_updater.cc -o build/tree/tree_updater.o Nov 28 07:11:21.571 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_histmaker.o src/tree/updater_histmaker.cc >build/tree/updater_histmaker.d Nov 28 07:11:21.571 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_histmaker.cc -o build/tree/updater_histmaker.o Nov 28 07:11:21.571 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_refresh.o src/tree/updater_refresh.cc >build/tree/updater_refresh.d Nov 28 07:11:21.571 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_refresh.cc -o build/tree/updater_refresh.o Nov 28 07:11:21.572 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_model.o src/tree/tree_model.cc >build/tree/tree_model.d Nov 28 07:11:21.572 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_model.cc -o build/tree/tree_model.o Nov 28 07:11:21.572 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_sync.o src/tree/updater_sync.cc >build/tree/updater_sync.d Nov 28 07:11:21.572 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_sync.cc -o build/tree/updater_sync.o Nov 28 07:11:21.573 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/split_evaluator.o src/tree/split_evaluator.cc >build/tree/split_evaluator.d Nov 28 07:11:21.573 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/split_evaluator.cc -o build/tree/split_evaluator.o Nov 28 07:11:21.573 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_skmaker.o src/tree/updater_skmaker.cc >build/tree/updater_skmaker.d Nov 28 07:11:21.573 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_skmaker.cc -o build/tree/updater_skmaker.o Nov 28 07:11:21.574 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_colmaker.o src/tree/updater_colmaker.cc >build/tree/updater_colmaker.d Nov 28 07:11:21.574 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_colmaker.cc -o build/tree/updater_colmaker.o Nov 28 07:11:21.574 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_fast_hist.o src/tree/updater_fast_hist.cc >build/tree/updater_fast_hist.d Nov 28 07:11:21.575 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_fast_hist.cc -o build/tree/updater_fast_hist.o Nov 28 07:11:21.575 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbtree.o src/gbm/gbtree.cc >build/gbm/gbtree.d Nov 28 07:11:21.575 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbtree.cc -o build/gbm/gbtree.o Nov 28 07:11:21.576 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gblinear.o src/gbm/gblinear.cc >build/gbm/gblinear.d Nov 28 07:11:21.576 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gblinear.cc -o build/gbm/gblinear.o Nov 28 07:11:21.576 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbm.o src/gbm/gbm.cc >build/gbm/gbm.d Nov 28 07:11:21.577 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbm.cc -o build/gbm/gbm.o Nov 28 07:11:21.577 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api.o src/c_api/c_api.cc >build/c_api/c_api.d Nov 28 07:11:21.577 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api.cc -o build/c_api/c_api.o Nov 28 07:11:21.577 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api_error.o src/c_api/c_api_error.cc >build/c_api/c_api_error.d Nov 28 07:11:21.578 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api_error.cc -o build/c_api/c_api_error.o Nov 28 07:11:21.578 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/linear_updater.o src/linear/linear_updater.cc >build/linear/linear_updater.d Nov 28 07:11:21.578 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/linear_updater.cc -o build/linear/linear_updater.o Nov 28 07:11:21.579 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_shotgun.o src/linear/updater_shotgun.cc >build/linear/updater_shotgun.d Nov 28 07:11:21.579 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_shotgun.cc -o build/linear/updater_shotgun.o Nov 28 07:11:21.579 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_coordinate.o src/linear/updater_coordinate.cc >build/linear/updater_coordinate.d Nov 28 07:11:21.580 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_coordinate.cc -o build/linear/updater_coordinate.o Nov 28 07:11:21.580 INFO [stderr] cd dmlc-core; "make" libdmlc.a config=/target/debug/build/xgboost-sys-15f3d12385a5d97a/out/xgboost/make/config.mk; cd /target/debug/build/xgboost-sys-15f3d12385a5d97a/out/xgboost Nov 28 07:11:21.580 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-15f3d12385a5d97a/out/xgboost/dmlc-core' Nov 28 07:11:21.581 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o line_split.o src/io/line_split.cc Nov 28 07:11:21.581 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o indexed_recordio_split.o src/io/indexed_recordio_split.cc Nov 28 07:11:21.581 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio_split.o src/io/recordio_split.cc Nov 28 07:11:21.582 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o input_split_base.o src/io/input_split_base.cc Nov 28 07:11:21.582 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o io.o src/io.cc Nov 28 07:11:21.582 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o filesys.o src/io/filesys.cc Nov 28 07:11:21.583 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o local_filesys.o src/io/local_filesys.cc Nov 28 07:11:21.583 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o data.o src/data.cc Nov 28 07:11:21.583 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio.o src/recordio.cc Nov 28 07:11:21.583 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o config.o src/config.cc Nov 28 07:11:21.584 INFO [stderr] ar cr libdmlc.a line_split.o indexed_recordio_split.o recordio_split.o input_split_base.o io.o filesys.o local_filesys.o data.o recordio.o config.o Nov 28 07:11:21.584 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-15f3d12385a5d97a/out/xgboost/dmlc-core' Nov 28 07:11:21.584 INFO [stderr] cd rabit; "make" lib/librabit.a USE_SSE=1; cd /target/debug/build/xgboost-sys-15f3d12385a5d97a/out/xgboost Nov 28 07:11:21.585 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-15f3d12385a5d97a/out/xgboost/rabit' Nov 28 07:11:21.585 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_base.o src/allreduce_base.cc Nov 28 07:11:21.585 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_robust.o src/allreduce_robust.cc Nov 28 07:11:21.586 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o engine.o src/engine.cc Nov 28 07:11:21.586 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o c_api.o src/c_api.cc Nov 28 07:11:21.586 INFO [stderr] ar cr lib/librabit.a allreduce_base.o allreduce_robust.o engine.o c_api.o Nov 28 07:11:21.587 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-15f3d12385a5d97a/out/xgboost/rabit' Nov 28 07:11:21.588 INFO [stderr] ar crv lib/libxgboost.a build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o Nov 28 07:11:21.588 INFO [stderr] a - build/logging.o Nov 28 07:11:21.589 INFO [stderr] a - build/learner.o Nov 28 07:11:21.589 INFO [stderr] a - build/predictor/predictor.o Nov 28 07:11:21.589 INFO [stderr] a - build/predictor/cpu_predictor.o Nov 28 07:11:21.590 INFO [stderr] a - build/common/host_device_vector.o Nov 28 07:11:21.590 INFO [stderr] a - build/common/common.o Nov 28 07:11:21.590 INFO [stderr] a - build/common/hist_util.o Nov 28 07:11:21.590 INFO [stderr] a - build/metric/metric.o Nov 28 07:11:21.591 INFO [stderr] a - build/metric/rank_metric.o Nov 28 07:11:21.591 INFO [stderr] a - build/metric/elementwise_metric.o Nov 28 07:11:21.591 INFO [stderr] a - build/metric/multiclass_metric.o Nov 28 07:11:21.592 INFO [stderr] a - build/objective/hinge.o Nov 28 07:11:21.592 INFO [stderr] a - build/objective/multiclass_obj.o Nov 28 07:11:21.592 INFO [stderr] a - build/objective/objective.o Nov 28 07:11:21.593 INFO [stderr] a - build/objective/rank_obj.o Nov 28 07:11:21.593 INFO [stderr] a - build/objective/regression_obj.o Nov 28 07:11:21.593 INFO [stderr] a - build/data/sparse_page_dmatrix.o Nov 28 07:11:21.594 INFO [stderr] a - build/data/sparse_page_source.o Nov 28 07:11:21.594 INFO [stderr] a - build/data/sparse_page_writer.o Nov 28 07:11:21.594 INFO [stderr] a - build/data/simple_csr_source.o Nov 28 07:11:21.594 INFO [stderr] a - build/data/data.o Nov 28 07:11:21.595 INFO [stderr] a - build/data/sparse_page_raw_format.o Nov 28 07:11:21.595 INFO [stderr] a - build/data/simple_dmatrix.o Nov 28 07:11:21.595 INFO [stderr] a - build/tree/updater_prune.o Nov 28 07:11:21.596 INFO [stderr] a - build/tree/tree_updater.o Nov 28 07:11:21.596 INFO [stderr] a - build/tree/updater_histmaker.o Nov 28 07:11:21.596 INFO [stderr] a - build/tree/updater_refresh.o Nov 28 07:11:21.597 INFO [stderr] a - build/tree/tree_model.o Nov 28 07:11:21.597 INFO [stderr] a - build/tree/updater_sync.o Nov 28 07:11:21.597 INFO [stderr] a - build/tree/split_evaluator.o Nov 28 07:11:21.598 INFO [stderr] a - build/tree/updater_skmaker.o Nov 28 07:11:21.598 INFO [stderr] a - build/tree/updater_colmaker.o Nov 28 07:11:21.598 INFO [stderr] a - build/tree/updater_fast_hist.o Nov 28 07:11:21.598 INFO [stderr] a - build/gbm/gbtree.o Nov 28 07:11:21.599 INFO [stderr] a - build/gbm/gblinear.o Nov 28 07:11:21.599 INFO [stderr] a - build/gbm/gbm.o Nov 28 07:11:21.599 INFO [stderr] a - build/c_api/c_api.o Nov 28 07:11:21.600 INFO [stderr] a - build/c_api/c_api_error.o Nov 28 07:11:21.600 INFO [stderr] a - build/linear/linear_updater.o Nov 28 07:11:21.600 INFO [stderr] a - build/linear/updater_shotgun.o Nov 28 07:11:21.601 INFO [stderr] a - build/linear/updater_coordinate.o Nov 28 07:11:21.602 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -shared -o lib/libxgboost.so build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Nov 28 07:11:21.603 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/cli_main.o src/cli_main.cc >build/cli_main.d Nov 28 07:11:21.603 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/cli_main.cc -o build/cli_main.o Nov 28 07:11:21.605 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -o xgboost build/cli_main.o build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Nov 28 07:11:21.605 INFO [stderr] Successfully build multi-thread xgboost Nov 28 07:11:21.605 INFO [stderr] Nov 28 07:11:21.606 INFO [stderr] --- stderr Nov 28 07:11:21.606 INFO [stderr] Makefile:31: MAKE [make] - checked OK Nov 28 07:11:21.606 INFO [stderr] src/c_api/c_api.cc: In function 'int XGDMatrixCreateFromDT(void**, const char**, xgboost::bst_ulong, xgboost::bst_ulong, void**, int)': Nov 28 07:11:21.606 INFO [stderr] src/c_api/c_api.cc:621:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] Nov 28 07:11:21.607 INFO [stderr] for (auto j = 0; j < ncol; ++j) { Nov 28 07:11:21.607 INFO [stderr] ^ Nov 28 07:11:21.607 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found Nov 28 07:11:21.608 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found, err: true Nov 28 07:11:21.608 INFO [stderr] thread 'main' panicked at 'Unable to generate bindings.: ()', src/libcore/result.rs:1009:5 Nov 28 07:11:21.608 INFO [stderr] stack backtrace: Nov 28 07:11:21.609 INFO [stderr] 0: 0x5558d2693233 - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::hd54bf03150578a04 Nov 28 07:11:21.609 INFO [stderr] at src/libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Nov 28 07:11:21.609 INFO [stderr] 1: 0x5558d268d998 - std::sys_common::backtrace::_print::hbc4190a26a28239f Nov 28 07:11:21.609 INFO [stderr] at src/libstd/sys_common/backtrace.rs:71 Nov 28 07:11:21.610 INFO [stderr] 2: 0x5558d26921a2 - std::panicking::default_hook::{{closure}}::he23730a9977d5d2c Nov 28 07:11:21.610 INFO [stderr] at src/libstd/sys_common/backtrace.rs:59 Nov 28 07:11:21.610 INFO [stderr] at src/libstd/panicking.rs:211 Nov 28 07:11:21.610 INFO [stderr] 3: 0x5558d2691f0d - std::panicking::default_hook::h84b3205da674e965 Nov 28 07:11:21.611 INFO [stderr] at src/libstd/panicking.rs:227 Nov 28 07:11:21.611 INFO [stderr] 4: 0x5558d26928b0 - std::panicking::rust_panic_with_hook::h1982b651954184b4 Nov 28 07:11:21.611 INFO [stderr] at src/libstd/panicking.rs:476 Nov 28 07:11:21.612 INFO [stderr] 5: 0x5558d2692431 - std::panicking::continue_panic_fmt::h174716ad1cd072b2 Nov 28 07:11:21.612 INFO [stderr] at src/libstd/panicking.rs:390 Nov 28 07:11:21.612 INFO [stderr] 6: 0x5558d2692315 - rust_begin_unwind Nov 28 07:11:21.613 INFO [stderr] at src/libstd/panicking.rs:325 Nov 28 07:11:21.613 INFO [stderr] 7: 0x5558d26ac06c - core::panicking::panic_fmt::h597e27b8c6a93d56 Nov 28 07:11:21.613 INFO [stderr] at src/libcore/panicking.rs:77 Nov 28 07:11:21.613 INFO [stderr] 8: 0x5558d2094291 - core::result::unwrap_failed::h8be04a52ff7de28a Nov 28 07:11:21.614 INFO [stderr] at /rustc/6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb/src/libcore/macros.rs:26 Nov 28 07:11:21.614 INFO [stderr] 9: 0x5558d2093f01 - >::expect::h381b5a87960bfff2 Nov 28 07:11:21.614 INFO [stderr] at /rustc/6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb/src/libcore/result.rs:835 Nov 28 07:11:21.615 INFO [stderr] 10: 0x5558d20925e0 - build_script_build::main::h91c63f416f8e6c42 Nov 28 07:11:21.615 INFO [stderr] at /source/build.rs:35 Nov 28 07:11:21.615 INFO [stderr] 11: 0x5558d2093a8f - std::rt::lang_start::{{closure}}::hf87f5e4eed124387 Nov 28 07:11:21.616 INFO [stderr] at /rustc/6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb/src/libstd/rt.rs:74 Nov 28 07:11:21.616 INFO [stderr] 12: 0x5558d26922b2 - std::panicking::try::do_call::haa8c3812c8ee3dac Nov 28 07:11:21.616 INFO [stderr] at src/libstd/rt.rs:59 Nov 28 07:11:21.617 INFO [stderr] at src/libstd/panicking.rs:310 Nov 28 07:11:21.617 INFO [stderr] 13: 0x5558d26a5f49 - __rust_maybe_catch_panic Nov 28 07:11:21.617 INFO [stderr] at src/libpanic_unwind/lib.rs:102 Nov 28 07:11:21.618 INFO [stderr] 14: 0x5558d2692c83 - std::rt::lang_start_internal::h209b9d62a82d0a63 Nov 28 07:11:21.618 INFO [stderr] at src/libstd/panicking.rs:289 Nov 28 07:11:21.618 INFO [stderr] at src/libstd/panic.rs:398 Nov 28 07:11:21.619 INFO [stderr] at src/libstd/rt.rs:58 Nov 28 07:11:21.619 INFO [stderr] 15: 0x5558d2093a68 - std::rt::lang_start::hff633659da441e83 Nov 28 07:11:21.619 INFO [stderr] at /rustc/6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb/src/libstd/rt.rs:74 Nov 28 07:11:21.619 INFO [stderr] 16: 0x5558d2093299 - main Nov 28 07:11:21.620 INFO [stderr] 17: 0x7ff920f2182f - __libc_start_main Nov 28 07:11:21.620 INFO [stderr] 18: 0x5558d2091b78 - _start Nov 28 07:11:21.620 INFO [stderr] 19: 0x0 - Nov 28 07:11:21.621 INFO [stderr] Nov 28 07:11:21.621 INFO [stderr] su: No module specific data is present Nov 28 07:11:22.467 INFO running `"docker" "inspect" "6ed1d9d9d3b7501630d9d773f5687e255b0ce0dde9b118a2081cdd20411a64cc"` Nov 28 07:11:22.783 INFO running `"docker" "rm" "-f" "6ed1d9d9d3b7501630d9d773f5687e255b0ce0dde9b118a2081cdd20411a64cc"` Nov 28 07:11:23.215 INFO [stdout] 6ed1d9d9d3b7501630d9d773f5687e255b0ce0dde9b118a2081cdd20411a64cc