Nov 27 16:56:31.700 INFO documenting mttmartin/anneal_predictor against master#6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb for pr-55318
Nov 27 16:56:31.702 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55318/worker-4/master#6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-4/pr-55318/master#6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +6bfb46e4ac9a2704f06de1a2ff7a4612cd70c8cb-alt doc --frozen --no-deps --document-private-items" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 27 16:56:32.221 INFO [stdout] 65ed8dfabb3260f8760d4563beba08d1789d05eae47c01743e04ccfbc5964bc2
Nov 27 16:56:32.223 INFO running `"docker" "start" "-a" "65ed8dfabb3260f8760d4563beba08d1789d05eae47c01743e04ccfbc5964bc2"`
Nov 27 16:56:34.527 INFO [stderr] usermod: no changes
Nov 27 16:56:34.603 INFO [stderr]  Documenting anneal_predictor v0.1.0 (/source)
Nov 27 16:56:34.923 INFO [stderr] warning: method `deltaG_dinucleotide` should have a snake case name such as `delta_g_dinucleotide`
Nov 27 16:56:34.923 INFO [stderr]    --> src/main.rs:8:2
Nov 27 16:56:34.923 INFO [stderr]     |
Nov 27 16:56:34.923 INFO [stderr] 8   |       fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 {
Nov 27 16:56:34.923 INFO [stderr]     |  _____^
Nov 27 16:56:34.923 INFO [stderr] 9   | |         let mut deltaS = 0.0;
Nov 27 16:56:34.923 INFO [stderr] 10  | |         let mut deltaH = 0.0;
Nov 27 16:56:34.923 INFO [stderr] 11  | |
Nov 27 16:56:34.923 INFO [stderr] ...   |
Nov 27 16:56:34.923 INFO [stderr] 279 | |         deltaG
Nov 27 16:56:34.923 INFO [stderr] 280 | |     }
Nov 27 16:56:34.923 INFO [stderr]     | |_____^
Nov 27 16:56:34.926 INFO [stderr]     |
Nov 27 16:56:34.926 INFO [stderr]     = note: #[warn(non_snake_case)] on by default
Nov 27 16:56:34.926 INFO [stderr] 
Nov 27 16:56:34.926 INFO [stderr] warning: method `initiation_termination_deltaG` should have a snake case name such as `initiation_termination_delta_g`
Nov 27 16:56:34.926 INFO [stderr]    --> src/main.rs:282:1
Nov 27 16:56:34.926 INFO [stderr]     |
Nov 27 16:56:34.926 INFO [stderr] 282 | / fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 {
Nov 27 16:56:34.926 INFO [stderr] 283 | |     if (template_nucleotide == "A" && oligo_nucleotide == "T") || (template_nucleotide == "T" && oligo_nucleotide == "A") {
Nov 27 16:56:34.926 INFO [stderr] 284 | |         let deltaH = 9.62;
Nov 27 16:56:34.926 INFO [stderr] 285 | |         let deltaS = 17.15/1000.0;
Nov 27 16:56:34.926 INFO [stderr] ...   |
Nov 27 16:56:34.926 INFO [stderr] 296 | |     }
Nov 27 16:56:34.926 INFO [stderr] 297 | | }
Nov 27 16:56:34.926 INFO [stderr]     | |_^
Nov 27 16:56:34.926 INFO [stderr] 
Nov 27 16:56:34.926 INFO [stderr] warning: method `calc_deltaG` should have a snake case name such as `calc_delta_g`
Nov 27 16:56:34.926 INFO [stderr]    --> src/main.rs:299:1
Nov 27 16:56:34.926 INFO [stderr]     |
Nov 27 16:56:34.926 INFO [stderr] 299 | / fn calc_deltaG(&self, template_piece: String) -> f64{
Nov 27 16:56:34.926 INFO [stderr] 300 | |     let mut deltaG = 0.0;
Nov 27 16:56:34.926 INFO [stderr] 301 | |     println!("template piece: {:?}", template_piece);
Nov 27 16:56:34.926 INFO [stderr] 302 | |     for i in 0..(self.oligo.len()-1) {
Nov 27 16:56:34.926 INFO [stderr] ...   |
Nov 27 16:56:34.926 INFO [stderr] 317 | |     deltaG
Nov 27 16:56:34.926 INFO [stderr] 318 | | }
Nov 27 16:56:34.926 INFO [stderr]     | |_^
Nov 27 16:56:34.926 INFO [stderr] 
Nov 27 16:56:34.926 INFO [stderr] warning: method `lowest_deltaG` should have a snake case name such as `lowest_delta_g`
Nov 27 16:56:34.926 INFO [stderr]    --> src/main.rs:320:2
Nov 27 16:56:34.926 INFO [stderr]     |
Nov 27 16:56:34.926 INFO [stderr] 320 |       fn lowest_deltaG(&self) -> f64 {
Nov 27 16:56:34.926 INFO [stderr]     |  _____^
Nov 27 16:56:34.926 INFO [stderr] 321 | |         let mut lowestDeltaG = 0.0;
Nov 27 16:56:34.926 INFO [stderr] 322 | |         for i in 0..(self.template.len() - self.oligo.len()) {
Nov 27 16:56:34.926 INFO [stderr] 323 | |             let template_piece = self.template[i..(self.oligo.len()+i)].to_string();
Nov 27 16:56:34.926 INFO [stderr] ...   |
Nov 27 16:56:34.926 INFO [stderr] 329 | |         lowestDeltaG
Nov 27 16:56:34.926 INFO [stderr] 330 | |     }
Nov 27 16:56:34.926 INFO [stderr]     | |_____^
Nov 27 16:56:34.927 INFO [stderr] 
Nov 27 16:56:36.255 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1.69s
Nov 27 16:56:36.258 INFO [stderr] su: No module specific data is present
Nov 27 16:56:37.691 INFO running `"docker" "inspect" "65ed8dfabb3260f8760d4563beba08d1789d05eae47c01743e04ccfbc5964bc2"`
Nov 27 16:56:37.991 INFO running `"docker" "rm" "-f" "65ed8dfabb3260f8760d4563beba08d1789d05eae47c01743e04ccfbc5964bc2"`
Nov 27 16:56:38.262 INFO [stdout] 65ed8dfabb3260f8760d4563beba08d1789d05eae47c01743e04ccfbc5964bc2