Dec 02 00:47:45.660 INFO documenting xgboost-sys-0.1.1 against try#f86f76f89ea2b1ccbfb3741962ec2029d878a389 for pr-55318-1 Dec 02 00:47:45.660 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/pr-55318-1/worker-2/try#f86f76f89ea2b1ccbfb3741962ec2029d878a389:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/pr-55318-1/try#f86f76f89ea2b1ccbfb3741962ec2029d878a389:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +f86f76f89ea2b1ccbfb3741962ec2029d878a389-alt doc --frozen --no-deps --document-private-items" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 02 00:47:45.977 INFO [stdout] 2beb4c23cbb1e15b719ad3536857595411a166173a796dc3a4a0c7440c5ee0a1 Dec 02 00:47:45.978 INFO running `"docker" "start" "-a" "2beb4c23cbb1e15b719ad3536857595411a166173a796dc3a4a0c7440c5ee0a1"` Dec 02 00:47:46.378 INFO [stderr] usermod: no changes Dec 02 00:47:46.540 INFO [stderr] Compiling regex-syntax v0.6.4 Dec 02 00:47:46.540 INFO [stderr] Compiling regex-syntax v0.5.6 Dec 02 00:47:46.541 INFO [stderr] Compiling humantime v1.2.0 Dec 02 00:47:46.542 INFO [stderr] Compiling memchr v1.0.2 Dec 02 00:47:46.542 INFO [stderr] Compiling atty v0.2.11 Dec 02 00:47:46.543 INFO [stderr] Compiling which v1.0.5 Dec 02 00:47:46.543 INFO [stderr] Compiling clang-sys v0.22.0 Dec 02 00:47:47.856 INFO [stderr] Compiling clap v2.32.0 Dec 02 00:47:48.148 INFO [stderr] Compiling nom v3.2.1 Dec 02 00:47:56.722 INFO [stderr] Compiling cexpr v0.2.3 Dec 02 00:48:24.441 INFO [stderr] Compiling regex v0.2.11 Dec 02 00:48:24.856 INFO [stderr] Compiling regex v1.1.0 Dec 02 00:48:47.556 INFO [stderr] Compiling env_logger v0.5.13 Dec 02 00:48:49.800 INFO [stderr] Compiling bindgen v0.36.1 Dec 02 00:49:09.268 INFO [stderr] Compiling xgboost-sys v0.1.1 (/source) Dec 02 00:52:45.449 INFO [stderr] error: failed to run custom build command for `xgboost-sys v0.1.1 (/source)` Dec 02 00:52:45.449 INFO [stderr] process didn't exit successfully: `/target/debug/build/xgboost-sys-f2c769bfae4b4888/build-script-build` (exit code: 101) Dec 02 00:52:45.449 INFO [stderr] --- stdout Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/logging.o src/logging.cc >build/logging.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/logging.cc -o build/logging.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/learner.o src/learner.cc >build/learner.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/learner.cc -o build/learner.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/predictor.o src/predictor/predictor.cc >build/predictor/predictor.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/predictor.cc -o build/predictor/predictor.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/cpu_predictor.o src/predictor/cpu_predictor.cc >build/predictor/cpu_predictor.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/cpu_predictor.cc -o build/predictor/cpu_predictor.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/host_device_vector.o src/common/host_device_vector.cc >build/common/host_device_vector.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/host_device_vector.cc -o build/common/host_device_vector.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/common.o src/common/common.cc >build/common/common.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/common.cc -o build/common/common.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/hist_util.o src/common/hist_util.cc >build/common/hist_util.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/hist_util.cc -o build/common/hist_util.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/metric.o src/metric/metric.cc >build/metric/metric.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/metric.cc -o build/metric/metric.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/rank_metric.o src/metric/rank_metric.cc >build/metric/rank_metric.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/rank_metric.cc -o build/metric/rank_metric.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/elementwise_metric.o src/metric/elementwise_metric.cc >build/metric/elementwise_metric.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/elementwise_metric.cc -o build/metric/elementwise_metric.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/multiclass_metric.o src/metric/multiclass_metric.cc >build/metric/multiclass_metric.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/multiclass_metric.cc -o build/metric/multiclass_metric.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/hinge.o src/objective/hinge.cc >build/objective/hinge.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/hinge.cc -o build/objective/hinge.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/multiclass_obj.o src/objective/multiclass_obj.cc >build/objective/multiclass_obj.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/multiclass_obj.cc -o build/objective/multiclass_obj.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/objective.o src/objective/objective.cc >build/objective/objective.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/objective.cc -o build/objective/objective.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/rank_obj.o src/objective/rank_obj.cc >build/objective/rank_obj.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/rank_obj.cc -o build/objective/rank_obj.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/regression_obj.o src/objective/regression_obj.cc >build/objective/regression_obj.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/regression_obj.cc -o build/objective/regression_obj.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_dmatrix.o src/data/sparse_page_dmatrix.cc >build/data/sparse_page_dmatrix.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_dmatrix.cc -o build/data/sparse_page_dmatrix.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_source.o src/data/sparse_page_source.cc >build/data/sparse_page_source.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_source.cc -o build/data/sparse_page_source.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_writer.o src/data/sparse_page_writer.cc >build/data/sparse_page_writer.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_writer.cc -o build/data/sparse_page_writer.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_csr_source.o src/data/simple_csr_source.cc >build/data/simple_csr_source.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_csr_source.cc -o build/data/simple_csr_source.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/data.o src/data/data.cc >build/data/data.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/data.cc -o build/data/data.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_raw_format.o src/data/sparse_page_raw_format.cc >build/data/sparse_page_raw_format.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_raw_format.cc -o build/data/sparse_page_raw_format.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_dmatrix.o src/data/simple_dmatrix.cc >build/data/simple_dmatrix.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_dmatrix.cc -o build/data/simple_dmatrix.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_prune.o src/tree/updater_prune.cc >build/tree/updater_prune.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_prune.cc -o build/tree/updater_prune.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_updater.o src/tree/tree_updater.cc >build/tree/tree_updater.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_updater.cc -o build/tree/tree_updater.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_histmaker.o src/tree/updater_histmaker.cc >build/tree/updater_histmaker.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_histmaker.cc -o build/tree/updater_histmaker.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/split_evaluator.o src/tree/split_evaluator.cc >build/tree/split_evaluator.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/split_evaluator.cc -o build/tree/split_evaluator.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_refresh.o src/tree/updater_refresh.cc >build/tree/updater_refresh.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_refresh.cc -o build/tree/updater_refresh.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_model.o src/tree/tree_model.cc >build/tree/tree_model.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_model.cc -o build/tree/tree_model.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_sync.o src/tree/updater_sync.cc >build/tree/updater_sync.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_sync.cc -o build/tree/updater_sync.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_skmaker.o src/tree/updater_skmaker.cc >build/tree/updater_skmaker.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_skmaker.cc -o build/tree/updater_skmaker.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_colmaker.o src/tree/updater_colmaker.cc >build/tree/updater_colmaker.d Dec 02 00:52:45.449 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_colmaker.cc -o build/tree/updater_colmaker.o Dec 02 00:52:45.449 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_fast_hist.o src/tree/updater_fast_hist.cc >build/tree/updater_fast_hist.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_fast_hist.cc -o build/tree/updater_fast_hist.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbtree.o src/gbm/gbtree.cc >build/gbm/gbtree.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbtree.cc -o build/gbm/gbtree.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gblinear.o src/gbm/gblinear.cc >build/gbm/gblinear.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gblinear.cc -o build/gbm/gblinear.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbm.o src/gbm/gbm.cc >build/gbm/gbm.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbm.cc -o build/gbm/gbm.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api.o src/c_api/c_api.cc >build/c_api/c_api.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api.cc -o build/c_api/c_api.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api_error.o src/c_api/c_api_error.cc >build/c_api/c_api_error.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api_error.cc -o build/c_api/c_api_error.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/linear_updater.o src/linear/linear_updater.cc >build/linear/linear_updater.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/linear_updater.cc -o build/linear/linear_updater.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_shotgun.o src/linear/updater_shotgun.cc >build/linear/updater_shotgun.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_shotgun.cc -o build/linear/updater_shotgun.o Dec 02 00:52:45.450 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_coordinate.o src/linear/updater_coordinate.cc >build/linear/updater_coordinate.d Dec 02 00:52:45.450 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_coordinate.cc -o build/linear/updater_coordinate.o Dec 02 00:52:45.450 INFO [stderr] cd dmlc-core; "make" libdmlc.a config=/target/debug/build/xgboost-sys-84cca8dc9962cd66/out/xgboost/make/config.mk; cd /target/debug/build/xgboost-sys-84cca8dc9962cd66/out/xgboost Dec 02 00:52:45.450 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-84cca8dc9962cd66/out/xgboost/dmlc-core' Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o line_split.o src/io/line_split.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o indexed_recordio_split.o src/io/indexed_recordio_split.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio_split.o src/io/recordio_split.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o input_split_base.o src/io/input_split_base.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o io.o src/io.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o filesys.o src/io/filesys.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o local_filesys.o src/io/local_filesys.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o data.o src/data.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio.o src/recordio.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o config.o src/config.cc Dec 02 00:52:45.450 INFO [stderr] ar cr libdmlc.a line_split.o indexed_recordio_split.o recordio_split.o input_split_base.o io.o filesys.o local_filesys.o data.o recordio.o config.o Dec 02 00:52:45.450 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-84cca8dc9962cd66/out/xgboost/dmlc-core' Dec 02 00:52:45.450 INFO [stderr] cd rabit; "make" lib/librabit.a USE_SSE=1; cd /target/debug/build/xgboost-sys-84cca8dc9962cd66/out/xgboost Dec 02 00:52:45.450 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-84cca8dc9962cd66/out/xgboost/rabit' Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_base.o src/allreduce_base.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_robust.o src/allreduce_robust.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o engine.o src/engine.cc Dec 02 00:52:45.450 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o c_api.o src/c_api.cc Dec 02 00:52:45.450 INFO [stderr] ar cr lib/librabit.a allreduce_base.o allreduce_robust.o engine.o c_api.o Dec 02 00:52:45.450 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-84cca8dc9962cd66/out/xgboost/rabit' Dec 02 00:52:45.450 INFO [stderr] ar crv lib/libxgboost.a build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/split_evaluator.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o Dec 02 00:52:45.450 INFO [stderr] a - build/logging.o Dec 02 00:52:45.450 INFO [stderr] a - build/learner.o Dec 02 00:52:45.450 INFO [stderr] a - build/predictor/predictor.o Dec 02 00:52:45.450 INFO [stderr] a - build/predictor/cpu_predictor.o Dec 02 00:52:45.450 INFO [stderr] a - build/common/host_device_vector.o Dec 02 00:52:45.450 INFO [stderr] a - build/common/common.o Dec 02 00:52:45.450 INFO [stderr] a - build/common/hist_util.o Dec 02 00:52:45.450 INFO [stderr] a - build/metric/metric.o Dec 02 00:52:45.450 INFO [stderr] a - build/metric/rank_metric.o Dec 02 00:52:45.450 INFO [stderr] a - build/metric/elementwise_metric.o Dec 02 00:52:45.450 INFO [stderr] a - build/metric/multiclass_metric.o Dec 02 00:52:45.450 INFO [stderr] a - build/objective/hinge.o Dec 02 00:52:45.450 INFO [stderr] a - build/objective/multiclass_obj.o Dec 02 00:52:45.450 INFO [stderr] a - build/objective/objective.o Dec 02 00:52:45.450 INFO [stderr] a - build/objective/rank_obj.o Dec 02 00:52:45.450 INFO [stderr] a - build/objective/regression_obj.o Dec 02 00:52:45.450 INFO [stderr] a - build/data/sparse_page_dmatrix.o Dec 02 00:52:45.450 INFO [stderr] a - build/data/sparse_page_source.o Dec 02 00:52:45.450 INFO [stderr] a - build/data/sparse_page_writer.o Dec 02 00:52:45.450 INFO [stderr] a - build/data/simple_csr_source.o Dec 02 00:52:45.450 INFO [stderr] a - build/data/data.o Dec 02 00:52:45.450 INFO [stderr] a - build/data/sparse_page_raw_format.o Dec 02 00:52:45.450 INFO [stderr] a - build/data/simple_dmatrix.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/updater_prune.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/tree_updater.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/updater_histmaker.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/split_evaluator.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/updater_refresh.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/tree_model.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/updater_sync.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/updater_skmaker.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/updater_colmaker.o Dec 02 00:52:45.450 INFO [stderr] a - build/tree/updater_fast_hist.o Dec 02 00:52:45.450 INFO [stderr] a - build/gbm/gbtree.o Dec 02 00:52:45.450 INFO [stderr] a - build/gbm/gblinear.o Dec 02 00:52:45.450 INFO [stderr] a - build/gbm/gbm.o Dec 02 00:52:45.450 INFO [stderr] a - build/c_api/c_api.o Dec 02 00:52:45.450 INFO [stderr] a - build/c_api/c_api_error.o Dec 02 00:52:45.450 INFO [stderr] a - build/linear/linear_updater.o Dec 02 00:52:45.450 INFO [stderr] a - build/linear/updater_shotgun.o Dec 02 00:52:45.450 INFO [stderr] a - build/linear/updater_coordinate.o Dec 02 00:52:45.451 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -shared -o lib/libxgboost.so build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/split_evaluator.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Dec 02 00:52:45.451 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/cli_main.o src/cli_main.cc >build/cli_main.d Dec 02 00:52:45.451 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/cli_main.cc -o build/cli_main.o Dec 02 00:52:45.451 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -o xgboost build/cli_main.o build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/split_evaluator.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Dec 02 00:52:45.451 INFO [stderr] Successfully build multi-thread xgboost Dec 02 00:52:45.451 INFO [stderr] Dec 02 00:52:45.451 INFO [stderr] --- stderr Dec 02 00:52:45.451 INFO [stderr] Makefile:31: MAKE [make] - checked OK Dec 02 00:52:45.451 INFO [stderr] src/c_api/c_api.cc: In function 'int XGDMatrixCreateFromDT(void**, const char**, xgboost::bst_ulong, xgboost::bst_ulong, void**, int)': Dec 02 00:52:45.451 INFO [stderr] src/c_api/c_api.cc:621:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] Dec 02 00:52:45.451 INFO [stderr] for (auto j = 0; j < ncol; ++j) { Dec 02 00:52:45.451 INFO [stderr] ^ Dec 02 00:52:45.451 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found Dec 02 00:52:45.451 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found, err: true Dec 02 00:52:45.451 INFO [stderr] thread 'main' panicked at 'Unable to generate bindings.: ()', src/libcore/result.rs:1009:5 Dec 02 00:52:45.451 INFO [stderr] stack backtrace: Dec 02 00:52:45.451 INFO [stderr] 0: 0x5653080b3ab3 - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h2cefa145a606e790 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Dec 02 00:52:45.451 INFO [stderr] 1: 0x5653080ae1e8 - std::sys_common::backtrace::_print::hd6fc37dc2c9d2c55 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/sys_common/backtrace.rs:71 Dec 02 00:52:45.451 INFO [stderr] 2: 0x5653080b2a22 - std::panicking::default_hook::{{closure}}::hd8fbbdefe60b3401 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/sys_common/backtrace.rs:59 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panicking.rs:211 Dec 02 00:52:45.451 INFO [stderr] 3: 0x5653080b278d - std::panicking::default_hook::h0fb90ac3aea40c16 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panicking.rs:227 Dec 02 00:52:45.451 INFO [stderr] 4: 0x5653080b3130 - std::panicking::rust_panic_with_hook::ha660137787660525 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panicking.rs:476 Dec 02 00:52:45.451 INFO [stderr] 5: 0x5653080b2cb1 - std::panicking::continue_panic_fmt::h32a895e868d3c05b Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panicking.rs:390 Dec 02 00:52:45.451 INFO [stderr] 6: 0x5653080b2b95 - rust_begin_unwind Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panicking.rs:325 Dec 02 00:52:45.451 INFO [stderr] 7: 0x5653080cc8ec - core::panicking::panic_fmt::h6c241fc912bce155 Dec 02 00:52:45.451 INFO [stderr] at src/libcore/panicking.rs:77 Dec 02 00:52:45.451 INFO [stderr] 8: 0x565307ab2401 - core::result::unwrap_failed::ha54360d50261522f Dec 02 00:52:45.451 INFO [stderr] at /rustc/f86f76f89ea2b1ccbfb3741962ec2029d878a389/src/libcore/macros.rs:26 Dec 02 00:52:45.451 INFO [stderr] 9: 0x565307ab2071 - >::expect::hf7380335776c7022 Dec 02 00:52:45.451 INFO [stderr] at /rustc/f86f76f89ea2b1ccbfb3741962ec2029d878a389/src/libcore/result.rs:835 Dec 02 00:52:45.451 INFO [stderr] 10: 0x565307ab0750 - build_script_build::main::h306e59da28c51d0c Dec 02 00:52:45.451 INFO [stderr] at /source/build.rs:35 Dec 02 00:52:45.451 INFO [stderr] 11: 0x565307ab1bff - std::rt::lang_start::{{closure}}::h9db844ff756c3ab3 Dec 02 00:52:45.451 INFO [stderr] at /rustc/f86f76f89ea2b1ccbfb3741962ec2029d878a389/src/libstd/rt.rs:74 Dec 02 00:52:45.451 INFO [stderr] 12: 0x5653080b2b32 - std::panicking::try::do_call::h0f7ec4769c9daf78 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/rt.rs:59 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panicking.rs:310 Dec 02 00:52:45.451 INFO [stderr] 13: 0x5653080c67c9 - __rust_maybe_catch_panic Dec 02 00:52:45.451 INFO [stderr] at src/libpanic_unwind/lib.rs:102 Dec 02 00:52:45.451 INFO [stderr] 14: 0x5653080b3503 - std::rt::lang_start_internal::h0fdea0bb68ff842a Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panicking.rs:289 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/panic.rs:398 Dec 02 00:52:45.451 INFO [stderr] at src/libstd/rt.rs:58 Dec 02 00:52:45.451 INFO [stderr] 15: 0x565307ab1bd8 - std::rt::lang_start::hf98f9b516b3e50c5 Dec 02 00:52:45.451 INFO [stderr] at /rustc/f86f76f89ea2b1ccbfb3741962ec2029d878a389/src/libstd/rt.rs:74 Dec 02 00:52:45.451 INFO [stderr] 16: 0x565307ab1409 - main Dec 02 00:52:45.451 INFO [stderr] 17: 0x7f084c64e82f - __libc_start_main Dec 02 00:52:45.451 INFO [stderr] 18: 0x565307aafce8 - _start Dec 02 00:52:45.451 INFO [stderr] 19: 0x0 - Dec 02 00:52:45.451 INFO [stderr] Dec 02 00:52:45.465 INFO [stderr] su: No module specific data is present Dec 02 00:52:46.322 INFO running `"docker" "inspect" "2beb4c23cbb1e15b719ad3536857595411a166173a796dc3a4a0c7440c5ee0a1"` Dec 02 00:52:46.554 INFO running `"docker" "rm" "-f" "2beb4c23cbb1e15b719ad3536857595411a166173a796dc3a4a0c7440c5ee0a1"` Dec 02 00:52:46.912 INFO [stdout] 2beb4c23cbb1e15b719ad3536857595411a166173a796dc3a4a0c7440c5ee0a1