Sep 20 05:27:20.624 INFO checking chemfiles-sys-0.5.0 against master#1e21c9a297a9fe668d62887a3a6a4add8e717b17 for pr-54352 Sep 20 05:27:20.624 INFO running: cargo +1e21c9a297a9fe668d62887a3a6a4add8e717b17-alt check --frozen --all --all-targets Sep 20 05:27:20.624 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-7/pr-54352/master#1e21c9a297a9fe668d62887a3a6a4add8e717b17:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-54352/worker-7/master#1e21c9a297a9fe668d62887a3a6a4add8e717b17:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +1e21c9a297a9fe668d62887a3a6a4add8e717b17-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "1536M" "crater"` Sep 20 05:27:20.846 INFO blam! cb565062a489806fbc9f4027c97f5742f81083576d5bb0e6f0999fd144a54647 Sep 20 05:27:20.848 INFO running `"docker" "start" "-a" "cb565062a489806fbc9f4027c97f5742f81083576d5bb0e6f0999fd144a54647"` Sep 20 05:27:21.434 INFO kablam! usermod: no changes Sep 20 05:27:21.461 INFO kablam! Compiling chemfiles-sys v0.5.0 (/source) Sep 20 05:27:27.021 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (/source)` Sep 20 05:27:27.021 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-4a9b966eb236d5de/build-script-build` (exit code: 101) Sep 20 05:27:27.021 INFO kablam! --- stdout Sep 20 05:27:27.021 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-56b15adbd6ac292a/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 20 05:27:27.021 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 20 05:27:27.021 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 20 05:27:27.021 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 20 05:27:27.021 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 20 05:27:27.021 INFO kablam! -- Detecting C compiler ABI info Sep 20 05:27:27.021 INFO kablam! -- Detecting C compiler ABI info - done Sep 20 05:27:27.021 INFO kablam! -- Detecting C compile features Sep 20 05:27:27.021 INFO kablam! -- Detecting C compile features - done Sep 20 05:27:27.021 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 20 05:27:27.021 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 20 05:27:27.021 INFO kablam! -- Detecting CXX compiler ABI info Sep 20 05:27:27.021 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 20 05:27:27.021 INFO kablam! -- Detecting CXX compile features Sep 20 05:27:27.021 INFO kablam! -- Detecting CXX compile features - done Sep 20 05:27:27.021 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 20 05:27:27.021 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 20 05:27:27.021 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 20 05:27:27.021 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 20 05:27:27.021 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 20 05:27:27.021 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 20 05:27:27.021 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 20 05:27:27.021 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 20 05:27:27.021 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 20 05:27:27.021 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 20 05:27:27.021 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 20 05:27:27.021 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 20 05:27:27.021 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 20 05:27:27.021 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 20 05:27:27.021 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 20 05:27:27.022 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 20 05:27:27.022 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 20 05:27:27.022 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 20 05:27:27.022 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 20 05:27:27.022 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 20 05:27:27.022 INFO kablam! -- Configuring incomplete, errors occurred! Sep 20 05:27:27.022 INFO kablam! See also "/target/debug/build/chemfiles-sys-56b15adbd6ac292a/out/build/CMakeFiles/CMakeOutput.log". Sep 20 05:27:27.022 INFO kablam! See also "/target/debug/build/chemfiles-sys-56b15adbd6ac292a/out/build/CMakeFiles/CMakeError.log". Sep 20 05:27:27.022 INFO kablam! Sep 20 05:27:27.022 INFO kablam! --- stderr Sep 20 05:27:27.022 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 20 05:27:27.022 INFO kablam! CMake Error: : System Error: Read-only file system Sep 20 05:27:27.022 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 20 05:27:27.022 INFO kablam! configure_file Problem configuring file Sep 20 05:27:27.022 INFO kablam! Call Stack (most recent call first): Sep 20 05:27:27.022 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 20 05:27:27.022 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 20 05:27:27.023 INFO kablam! Sep 20 05:27:27.023 INFO kablam! Sep 20 05:27:27.023 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 20 05:27:27.023 INFO kablam! CMake Error: : System Error: Read-only file system Sep 20 05:27:27.023 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 20 05:27:27.023 INFO kablam! configure_file Problem configuring file Sep 20 05:27:27.023 INFO kablam! Sep 20 05:27:27.023 INFO kablam! Sep 20 05:27:27.023 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 20 05:27:27.023 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 20 05:27:27.023 INFO kablam! Sep 20 05:27:27.023 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 20 05:27:27.023 INFO kablam! Sep 20 05:27:27.023 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 20 05:27:27.023 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 20 05:27:27.023 INFO kablam! information run "cmake --help-policy CMP0000". Sep 20 05:27:27.023 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 20 05:27:27.023 INFO kablam! Sep 20 05:27:27.023 INFO kablam! thread 'main' panicked at ' Sep 20 05:27:27.025 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 20 05:27:27.025 INFO kablam! Sep 20 05:27:27.025 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:776:5 Sep 20 05:27:27.025 INFO kablam! stack backtrace: Sep 20 05:27:27.025 INFO kablam! 0: 0x564080fa8e6e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::hf109cffeb5c37bed Sep 20 05:27:27.025 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 20 05:27:27.025 INFO kablam! 1: 0x564080f98bd6 - std::sys_common::backtrace::print::h4afa12dd16372edf Sep 20 05:27:27.025 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 20 05:27:27.025 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 20 05:27:27.025 INFO kablam! 2: 0x564080f9752d - std::panicking::default_hook::{{closure}}::ha3565edfa2d8a8f7 Sep 20 05:27:27.025 INFO kablam! at libstd/panicking.rs:211 Sep 20 05:27:27.026 INFO kablam! 3: 0x564080f972a0 - std::panicking::default_hook::h68592964d2f4a1f7 Sep 20 05:27:27.026 INFO kablam! at libstd/panicking.rs:227 Sep 20 05:27:27.026 INFO kablam! 4: 0x564080f97b3c - std::panicking::rust_panic_with_hook::h33d0ce8157f9a0b5 Sep 20 05:27:27.026 INFO kablam! at libstd/panicking.rs:477 Sep 20 05:27:27.026 INFO kablam! 5: 0x564080f97739 - std::panicking::continue_panic_fmt::hbe179dc3877c8fe2 Sep 20 05:27:27.026 INFO kablam! at libstd/panicking.rs:391 Sep 20 05:27:27.026 INFO kablam! 6: 0x564080f9769d - std::panicking::begin_panic_fmt::hcc5c596dd2a517d7 Sep 20 05:27:27.026 INFO kablam! at libstd/panicking.rs:346 Sep 20 05:27:27.026 INFO kablam! 7: 0x564080f2dcd1 - cmake::fail::hcc026dae687a09e4 Sep 20 05:27:27.026 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:776 Sep 20 05:27:27.026 INFO kablam! 8: 0x564080f2d60a - cmake::run::h035f65033a634acb Sep 20 05:27:27.026 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:757 Sep 20 05:27:27.026 INFO kablam! 9: 0x564080f291f9 - cmake::Config::build::h0665bdb115216403 Sep 20 05:27:27.026 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:609 Sep 20 05:27:27.026 INFO kablam! 10: 0x564080f25149 - build_script_build::main::hc99e84ec6e4a9d43 Sep 20 05:27:27.026 INFO kablam! at /source/build.rs:18 Sep 20 05:27:27.026 INFO kablam! 11: 0x564080f24f9f - std::rt::lang_start::{{closure}}::he0f80c1bd0b7865f Sep 20 05:27:27.026 INFO kablam! at libstd/rt.rs:74 Sep 20 05:27:27.026 INFO kablam! 12: 0x564080f975d2 - std::panicking::try::do_call::h7aef401f0d6f2817 Sep 20 05:27:27.026 INFO kablam! at libstd/rt.rs:59 Sep 20 05:27:27.026 INFO kablam! at libstd/panicking.rs:310 Sep 20 05:27:27.026 INFO kablam! 13: 0x564080fbb539 - __rust_maybe_catch_panic Sep 20 05:27:27.026 INFO kablam! at libpanic_unwind/lib.rs:102 Sep 20 05:27:27.026 INFO kablam! 14: 0x564080fa3c35 - std::rt::lang_start_internal::hd57f65710f093de9 Sep 20 05:27:27.026 INFO kablam! at libstd/panicking.rs:289 Sep 20 05:27:27.026 INFO kablam! at libstd/panic.rs:392 Sep 20 05:27:27.026 INFO kablam! at libstd/rt.rs:58 Sep 20 05:27:27.026 INFO kablam! 15: 0x564080f24f77 - std::rt::lang_start::ha7a5533a8057a078 Sep 20 05:27:27.026 INFO kablam! at libstd/rt.rs:74 Sep 20 05:27:27.026 INFO kablam! 16: 0x564080f25a79 - main Sep 20 05:27:27.026 INFO kablam! 17: 0x7f1fb23a082f - __libc_start_main Sep 20 05:27:27.026 INFO kablam! 18: 0x564080f24968 - _start Sep 20 05:27:27.026 INFO kablam! 19: 0x0 - Sep 20 05:27:27.026 INFO kablam! Sep 20 05:27:27.026 INFO kablam! su: No module specific data is present Sep 20 05:27:27.596 INFO running `"docker" "rm" "-f" "cb565062a489806fbc9f4027c97f5742f81083576d5bb0e6f0999fd144a54647"` Sep 20 05:27:27.701 INFO blam! cb565062a489806fbc9f4027c97f5742f81083576d5bb0e6f0999fd144a54647