Sep 10 21:23:05.189 INFO checking chemfiles-sys-0.5.0 against try#3a2610c2a16575649896925631bf8cec4f4b1961 for pr-54090 Sep 10 21:23:05.189 INFO running: cargo +3a2610c2a16575649896925631bf8cec4f4b1961-alt check --frozen --all --all-targets Sep 10 21:23:05.190 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-2/pr-54090/try#3a2610c2a16575649896925631bf8cec4f4b1961:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-54090/worker-2/try#3a2610c2a16575649896925631bf8cec4f4b1961:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +3a2610c2a16575649896925631bf8cec4f4b1961-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-m" "2G" "crater"` Sep 10 21:23:05.422 INFO blam! 568285d5d3bc3fa6d865f705bef01982201f5158413358982f6571f823f237c4 Sep 10 21:23:05.424 INFO running `"docker" "start" "-a" "568285d5d3bc3fa6d865f705bef01982201f5158413358982f6571f823f237c4"` Sep 10 21:23:07.118 INFO kablam! usermod: no changes Sep 10 21:23:07.194 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 10 21:23:22.278 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 10 21:23:22.278 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-5cd51259498bb509/build-script-build` (exit code: 101) Sep 10 21:23:22.278 INFO kablam! --- stdout Sep 10 21:23:22.278 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-6734a3c505fde5c1/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 10 21:23:22.278 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 10 21:23:22.278 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 10 21:23:22.278 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 10 21:23:22.278 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 10 21:23:22.278 INFO kablam! -- Detecting C compiler ABI info Sep 10 21:23:22.278 INFO kablam! -- Detecting C compiler ABI info - done Sep 10 21:23:22.278 INFO kablam! -- Detecting C compile features Sep 10 21:23:22.278 INFO kablam! -- Detecting C compile features - done Sep 10 21:23:22.278 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 10 21:23:22.278 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 10 21:23:22.278 INFO kablam! -- Detecting CXX compiler ABI info Sep 10 21:23:22.278 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 10 21:23:22.278 INFO kablam! -- Detecting CXX compile features Sep 10 21:23:22.278 INFO kablam! -- Detecting CXX compile features - done Sep 10 21:23:22.278 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 10 21:23:22.278 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 10 21:23:22.278 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 10 21:23:22.278 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 10 21:23:22.278 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 10 21:23:22.278 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 10 21:23:22.278 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 10 21:23:22.278 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 10 21:23:22.278 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 10 21:23:22.278 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 10 21:23:22.279 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 10 21:23:22.279 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 10 21:23:22.279 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 10 21:23:22.279 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 10 21:23:22.279 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 10 21:23:22.279 INFO kablam! -- Configuring incomplete, errors occurred! Sep 10 21:23:22.279 INFO kablam! See also "/target/debug/build/chemfiles-sys-6734a3c505fde5c1/out/build/CMakeFiles/CMakeOutput.log". Sep 10 21:23:22.279 INFO kablam! See also "/target/debug/build/chemfiles-sys-6734a3c505fde5c1/out/build/CMakeFiles/CMakeError.log". Sep 10 21:23:22.279 INFO kablam! Sep 10 21:23:22.279 INFO kablam! --- stderr Sep 10 21:23:22.279 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 10 21:23:22.279 INFO kablam! CMake Error: : System Error: Read-only file system Sep 10 21:23:22.279 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 10 21:23:22.279 INFO kablam! configure_file Problem configuring file Sep 10 21:23:22.279 INFO kablam! Call Stack (most recent call first): Sep 10 21:23:22.279 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 10 21:23:22.280 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 10 21:23:22.280 INFO kablam! CMake Error: : System Error: Read-only file system Sep 10 21:23:22.280 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 10 21:23:22.280 INFO kablam! configure_file Problem configuring file Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 10 21:23:22.280 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 10 21:23:22.280 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 10 21:23:22.280 INFO kablam! information run "cmake --help-policy CMP0000". Sep 10 21:23:22.280 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! thread 'main' panicked at ' Sep 10 21:23:22.280 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 10 21:23:22.280 INFO kablam! Sep 10 21:23:22.280 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 10 21:23:22.280 INFO kablam! stack backtrace: Sep 10 21:23:22.280 INFO kablam! 0: 0x5630a9da06ee - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h6fe5173ae235b38f Sep 10 21:23:22.280 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 10 21:23:22.280 INFO kablam! 1: 0x5630a9d902a6 - std::sys_common::backtrace::print::hb1efbd3d067eabc6 Sep 10 21:23:22.280 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 10 21:23:22.280 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 10 21:23:22.280 INFO kablam! 2: 0x5630a9d8ebfd - std::panicking::default_hook::{{closure}}::h109166af4c755142 Sep 10 21:23:22.280 INFO kablam! at libstd/panicking.rs:211 Sep 10 21:23:22.280 INFO kablam! 3: 0x5630a9d8e970 - std::panicking::default_hook::h992f159215e34f14 Sep 10 21:23:22.280 INFO kablam! at libstd/panicking.rs:227 Sep 10 21:23:22.280 INFO kablam! 4: 0x5630a9d8f20c - std::panicking::rust_panic_with_hook::h7d90dcad0bb485f2 Sep 10 21:23:22.280 INFO kablam! at libstd/panicking.rs:477 Sep 10 21:23:22.280 INFO kablam! 5: 0x5630a9d8ee09 - std::panicking::continue_panic_fmt::hd1c785c0ba366e26 Sep 10 21:23:22.280 INFO kablam! at libstd/panicking.rs:391 Sep 10 21:23:22.280 INFO kablam! 6: 0x5630a9d8ed6d - std::panicking::begin_panic_fmt::he0daf7f8d899f95f Sep 10 21:23:22.280 INFO kablam! at libstd/panicking.rs:346 Sep 10 21:23:22.280 INFO kablam! 7: 0x5630a9d2dc61 - cmake::fail::hea3217d8b1d184ac Sep 10 21:23:22.280 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 10 21:23:22.280 INFO kablam! 8: 0x5630a9d2d59a - cmake::run::he1f6ce10c44a6c5d Sep 10 21:23:22.280 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 10 21:23:22.280 INFO kablam! 9: 0x5630a9d2917e - cmake::Config::build::h98e40e8d0aee9b32 Sep 10 21:23:22.280 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 10 21:23:22.280 INFO kablam! 10: 0x5630a9d258e9 - build_script_build::main::h45eb6d9e8e04c22f Sep 10 21:23:22.280 INFO kablam! at /source/build.rs:18 Sep 10 21:23:22.280 INFO kablam! 11: 0x5630a9d253df - std::rt::lang_start::{{closure}}::h4592a3e20b0c72e4 Sep 10 21:23:22.280 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 10 21:23:22.281 INFO kablam! 12: 0x5630a9d8eca2 - std::panicking::try::do_call::h2ece1f76d9e135ca Sep 10 21:23:22.281 INFO kablam! at libstd/rt.rs:59 Sep 10 21:23:22.281 INFO kablam! at libstd/panicking.rs:310 Sep 10 21:23:22.281 INFO kablam! 13: 0x5630a9db2f79 - __rust_maybe_catch_panic Sep 10 21:23:22.281 INFO kablam! at libpanic_unwind/lib.rs:103 Sep 10 21:23:22.281 INFO kablam! 14: 0x5630a9d9b465 - std::rt::lang_start_internal::h72dcb4aefab2c171 Sep 10 21:23:22.281 INFO kablam! at libstd/panicking.rs:289 Sep 10 21:23:22.281 INFO kablam! at libstd/panic.rs:392 Sep 10 21:23:22.281 INFO kablam! at libstd/rt.rs:58 Sep 10 21:23:22.281 INFO kablam! 15: 0x5630a9d253b7 - std::rt::lang_start::hd43ff521b883f38d Sep 10 21:23:22.281 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 10 21:23:22.281 INFO kablam! 16: 0x5630a9d26219 - main Sep 10 21:23:22.281 INFO kablam! 17: 0x7fd2c8f2e82f - __libc_start_main Sep 10 21:23:22.281 INFO kablam! 18: 0x5630a9d24968 - _start Sep 10 21:23:22.281 INFO kablam! 19: 0x0 - Sep 10 21:23:22.281 INFO kablam! Sep 10 21:23:22.282 INFO kablam! su: No module specific data is present Sep 10 21:23:23.983 INFO running `"docker" "rm" "-f" "568285d5d3bc3fa6d865f705bef01982201f5158413358982f6571f823f237c4"` Sep 10 21:23:24.099 INFO blam! 568285d5d3bc3fa6d865f705bef01982201f5158413358982f6571f823f237c4