Sep 10 21:23:07.198 INFO checking chemfiles-sys-0.5.0 against master#f50b7758f4dc85dc1c5e38258adaa94213ac6ed1 for pr-54090 Sep 10 21:23:07.198 INFO running: cargo +f50b7758f4dc85dc1c5e38258adaa94213ac6ed1-alt check --frozen --all --all-targets Sep 10 21:23:07.198 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-5/pr-54090/master#f50b7758f4dc85dc1c5e38258adaa94213ac6ed1:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-54090/worker-5/master#f50b7758f4dc85dc1c5e38258adaa94213ac6ed1:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +f50b7758f4dc85dc1c5e38258adaa94213ac6ed1-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-m" "2G" "crater"` Sep 10 21:23:07.447 INFO blam! 7c0e26d935a8e81da59b8ab195465f2f87ae4aa0ad7dca5e912ecb0c7f4326a4 Sep 10 21:23:07.449 INFO running `"docker" "start" "-a" "7c0e26d935a8e81da59b8ab195465f2f87ae4aa0ad7dca5e912ecb0c7f4326a4"` Sep 10 21:23:09.554 INFO kablam! usermod: no changes Sep 10 21:23:09.634 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 10 21:23:24.678 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 10 21:23:24.678 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-31bdf5bf5289362a/build-script-build` (exit code: 101) Sep 10 21:23:24.678 INFO kablam! --- stdout Sep 10 21:23:24.678 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-fcc18e2be142df47/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 10 21:23:24.678 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 10 21:23:24.678 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 10 21:23:24.678 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 10 21:23:24.678 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 10 21:23:24.678 INFO kablam! -- Detecting C compiler ABI info Sep 10 21:23:24.678 INFO kablam! -- Detecting C compiler ABI info - done Sep 10 21:23:24.678 INFO kablam! -- Detecting C compile features Sep 10 21:23:24.678 INFO kablam! -- Detecting C compile features - done Sep 10 21:23:24.678 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 10 21:23:24.678 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 10 21:23:24.678 INFO kablam! -- Detecting CXX compiler ABI info Sep 10 21:23:24.678 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 10 21:23:24.678 INFO kablam! -- Detecting CXX compile features Sep 10 21:23:24.678 INFO kablam! -- Detecting CXX compile features - done Sep 10 21:23:24.678 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 10 21:23:24.678 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 10 21:23:24.678 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 10 21:23:24.678 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 10 21:23:24.678 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 10 21:23:24.679 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 10 21:23:24.679 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 10 21:23:24.679 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 10 21:23:24.679 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 10 21:23:24.679 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 10 21:23:24.679 INFO kablam! -- Configuring incomplete, errors occurred! Sep 10 21:23:24.679 INFO kablam! See also "/target/debug/build/chemfiles-sys-fcc18e2be142df47/out/build/CMakeFiles/CMakeOutput.log". Sep 10 21:23:24.679 INFO kablam! See also "/target/debug/build/chemfiles-sys-fcc18e2be142df47/out/build/CMakeFiles/CMakeError.log". Sep 10 21:23:24.679 INFO kablam! Sep 10 21:23:24.679 INFO kablam! --- stderr Sep 10 21:23:24.679 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 10 21:23:24.679 INFO kablam! CMake Error: : System Error: Read-only file system Sep 10 21:23:24.679 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 10 21:23:24.679 INFO kablam! configure_file Problem configuring file Sep 10 21:23:24.679 INFO kablam! Call Stack (most recent call first): Sep 10 21:23:24.679 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 10 21:23:24.679 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 10 21:23:24.679 INFO kablam! Sep 10 21:23:24.679 INFO kablam! Sep 10 21:23:24.679 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 10 21:23:24.679 INFO kablam! CMake Error: : System Error: Read-only file system Sep 10 21:23:24.679 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 10 21:23:24.679 INFO kablam! configure_file Problem configuring file Sep 10 21:23:24.679 INFO kablam! Sep 10 21:23:24.679 INFO kablam! Sep 10 21:23:24.679 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 10 21:23:24.679 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 10 21:23:24.682 INFO kablam! Sep 10 21:23:24.682 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 10 21:23:24.682 INFO kablam! Sep 10 21:23:24.682 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 10 21:23:24.682 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 10 21:23:24.682 INFO kablam! information run "cmake --help-policy CMP0000". Sep 10 21:23:24.682 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 10 21:23:24.682 INFO kablam! Sep 10 21:23:24.682 INFO kablam! thread 'main' panicked at ' Sep 10 21:23:24.682 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 10 21:23:24.682 INFO kablam! Sep 10 21:23:24.682 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 10 21:23:24.682 INFO kablam! stack backtrace: Sep 10 21:23:24.682 INFO kablam! 0: 0x55f037ada6fe - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::hd1ddf909c3007e6f Sep 10 21:23:24.682 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 10 21:23:24.682 INFO kablam! 1: 0x55f037aca356 - std::sys_common::backtrace::print::h8af87ee7033cea48 Sep 10 21:23:24.682 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 10 21:23:24.682 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 10 21:23:24.682 INFO kablam! 2: 0x55f037ac8c5d - std::panicking::default_hook::{{closure}}::hb070ea60f8cf9536 Sep 10 21:23:24.682 INFO kablam! at libstd/panicking.rs:211 Sep 10 21:23:24.682 INFO kablam! 3: 0x55f037ac89d0 - std::panicking::default_hook::h108b3d1da16fc0ff Sep 10 21:23:24.682 INFO kablam! at libstd/panicking.rs:227 Sep 10 21:23:24.682 INFO kablam! 4: 0x55f037ac926c - std::panicking::rust_panic_with_hook::he22c3c9d0a2321e8 Sep 10 21:23:24.682 INFO kablam! at libstd/panicking.rs:477 Sep 10 21:23:24.682 INFO kablam! 5: 0x55f037ac8e69 - std::panicking::continue_panic_fmt::h4cfdbf744ac7dbe3 Sep 10 21:23:24.682 INFO kablam! at libstd/panicking.rs:391 Sep 10 21:23:24.682 INFO kablam! 6: 0x55f037ac8dcd - std::panicking::begin_panic_fmt::h7fdbb213af5a8e37 Sep 10 21:23:24.682 INFO kablam! at libstd/panicking.rs:346 Sep 10 21:23:24.682 INFO kablam! 7: 0x55f037a67c61 - cmake::fail::hd118f7f2755ac68a Sep 10 21:23:24.682 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 10 21:23:24.682 INFO kablam! 8: 0x55f037a6759a - cmake::run::h239839f61b9c0e7d Sep 10 21:23:24.682 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 10 21:23:24.682 INFO kablam! 9: 0x55f037a6317e - cmake::Config::build::hf7a81e3362ef5bb1 Sep 10 21:23:24.682 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 10 21:23:24.682 INFO kablam! 10: 0x55f037a5fe69 - build_script_build::main::h7451a431e45947ad Sep 10 21:23:24.682 INFO kablam! at /source/build.rs:18 Sep 10 21:23:24.682 INFO kablam! 11: 0x55f037a6081f - std::rt::lang_start::{{closure}}::hc651e848c4757ccd Sep 10 21:23:24.682 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 10 21:23:24.682 INFO kablam! 12: 0x55f037ac8d02 - std::panicking::try::do_call::hd17f7bbbc80cfc74 Sep 10 21:23:24.682 INFO kablam! at libstd/rt.rs:59 Sep 10 21:23:24.682 INFO kablam! at libstd/panicking.rs:310 Sep 10 21:23:24.682 INFO kablam! 13: 0x55f037aecd09 - __rust_maybe_catch_panic Sep 10 21:23:24.683 INFO kablam! at libpanic_unwind/lib.rs:103 Sep 10 21:23:24.683 INFO kablam! 14: 0x55f037ad5485 - std::rt::lang_start_internal::h8194e5e3064ac4bd Sep 10 21:23:24.683 INFO kablam! at libstd/panicking.rs:289 Sep 10 21:23:24.683 INFO kablam! at libstd/panic.rs:392 Sep 10 21:23:24.683 INFO kablam! at libstd/rt.rs:58 Sep 10 21:23:24.683 INFO kablam! 15: 0x55f037a607f7 - std::rt::lang_start::h1f9038bea664807f Sep 10 21:23:24.683 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 10 21:23:24.683 INFO kablam! 16: 0x55f037a60799 - main Sep 10 21:23:24.683 INFO kablam! 17: 0x7f9a2435382f - __libc_start_main Sep 10 21:23:24.683 INFO kablam! 18: 0x55f037a5e968 - _start Sep 10 21:23:24.683 INFO kablam! 19: 0x0 - Sep 10 21:23:24.683 INFO kablam! Sep 10 21:23:24.685 INFO kablam! su: No module specific data is present Sep 10 21:23:26.209 INFO running `"docker" "rm" "-f" "7c0e26d935a8e81da59b8ab195465f2f87ae4aa0ad7dca5e912ecb0c7f4326a4"` Sep 10 21:23:26.324 INFO blam! 7c0e26d935a8e81da59b8ab195465f2f87ae4aa0ad7dca5e912ecb0c7f4326a4