Sep 18 02:35:55.473 INFO checking chemfiles-sys-0.5.0 against master#cb6d2dfa8923902b0992a1522dc4a45a9d3ba690 for pr-54033
Sep 18 02:35:55.473 INFO running: cargo +cb6d2dfa8923902b0992a1522dc4a45a9d3ba690-alt check --frozen --all --all-targets
Sep 18 02:35:55.473 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-0/pr-54033/master#cb6d2dfa8923902b0992a1522dc4a45a9d3ba690:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-54033/worker-0/master#cb6d2dfa8923902b0992a1522dc4a45a9d3ba690:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +cb6d2dfa8923902b0992a1522dc4a45a9d3ba690-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "1536M" "crater"`
Sep 18 02:35:55.653 INFO blam! 18576ee3ab62149aeab9649ce68e05ce987f9a10530363a620598867facd4c8c
Sep 18 02:35:55.655 INFO running `"docker" "start" "-a" "18576ee3ab62149aeab9649ce68e05ce987f9a10530363a620598867facd4c8c"`
Sep 18 02:35:56.664 INFO kablam! usermod: no changes
Sep 18 02:35:56.696 INFO kablam!    Compiling chemfiles-sys v0.5.0 (/source)
Sep 18 02:36:02.776 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (/source)`
Sep 18 02:36:02.776 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-0921f55286d1b5c7/build-script-build` (exit code: 101)
Sep 18 02:36:02.776 INFO kablam! --- stdout
Sep 18 02:36:02.776 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-9d72d8e8c2c56baa/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug"
Sep 18 02:36:02.776 INFO kablam! -- The C compiler identification is GNU 5.4.0
Sep 18 02:36:02.776 INFO kablam! -- The CXX compiler identification is GNU 5.4.0
Sep 18 02:36:02.776 INFO kablam! -- Check for working C compiler: /usr/bin/cc
Sep 18 02:36:02.776 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works
Sep 18 02:36:02.776 INFO kablam! -- Detecting C compiler ABI info
Sep 18 02:36:02.776 INFO kablam! -- Detecting C compiler ABI info - done
Sep 18 02:36:02.777 INFO kablam! -- Detecting C compile features
Sep 18 02:36:02.777 INFO kablam! -- Detecting C compile features - done
Sep 18 02:36:02.777 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++
Sep 18 02:36:02.777 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works
Sep 18 02:36:02.777 INFO kablam! -- Detecting CXX compiler ABI info
Sep 18 02:36:02.777 INFO kablam! -- Detecting CXX compiler ABI info - done
Sep 18 02:36:02.777 INFO kablam! -- Detecting CXX compile features
Sep 18 02:36:02.777 INFO kablam! -- Detecting CXX compile features - done
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wall
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression
Sep 18 02:36:02.777 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success
Sep 18 02:36:02.777 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so  
Sep 18 02:36:02.777 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR
Sep 18 02:36:02.777 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
Sep 18 02:36:02.778 INFO kablam! -- Configuring incomplete, errors occurred!
Sep 18 02:36:02.778 INFO kablam! See also "/target/debug/build/chemfiles-sys-9d72d8e8c2c56baa/out/build/CMakeFiles/CMakeOutput.log".
Sep 18 02:36:02.778 INFO kablam! See also "/target/debug/build/chemfiles-sys-9d72d8e8c2c56baa/out/build/CMakeFiles/CMakeError.log".
Sep 18 02:36:02.778 INFO kablam! 
Sep 18 02:36:02.778 INFO kablam! --- stderr
Sep 18 02:36:02.778 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp
Sep 18 02:36:02.778 INFO kablam! CMake Error: : System Error: Read-only file system
Sep 18 02:36:02.778 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file):
Sep 18 02:36:02.778 INFO kablam!   configure_file Problem configuring file
Sep 18 02:36:02.778 INFO kablam! Call Stack (most recent call first):
Sep 18 02:36:02.778 INFO kablam!   /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header)
Sep 18 02:36:02.778 INFO kablam!   chemfiles/CMakeLists.txt:71 (generate_export_header)
Sep 18 02:36:02.778 INFO kablam! 
Sep 18 02:36:02.778 INFO kablam! 
Sep 18 02:36:02.778 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp
Sep 18 02:36:02.778 INFO kablam! CMake Error: : System Error: Read-only file system
Sep 18 02:36:02.778 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file):
Sep 18 02:36:02.778 INFO kablam!   configure_file Problem configuring file
Sep 18 02:36:02.778 INFO kablam! 
Sep 18 02:36:02.778 INFO kablam! 
Sep 18 02:36:02.778 INFO kablam! CMake Warning (dev) in CMakeLists.txt:
Sep 18 02:36:02.778 INFO kablam!   No cmake_minimum_required command is present.  A line of code such as
Sep 18 02:36:02.779 INFO kablam! 
Sep 18 02:36:02.779 INFO kablam!     cmake_minimum_required(VERSION 3.5)
Sep 18 02:36:02.779 INFO kablam! 
Sep 18 02:36:02.779 INFO kablam!   should be added at the top of the file.  The version specified may be lower
Sep 18 02:36:02.779 INFO kablam!   if you wish to support older CMake versions for this project.  For more
Sep 18 02:36:02.779 INFO kablam!   information run "cmake --help-policy CMP0000".
Sep 18 02:36:02.779 INFO kablam! This warning is for project developers.  Use -Wno-dev to suppress it.
Sep 18 02:36:02.779 INFO kablam! 
Sep 18 02:36:02.779 INFO kablam! thread 'main' panicked at '
Sep 18 02:36:02.779 INFO kablam! command did not execute successfully, got: exit code: 1
Sep 18 02:36:02.779 INFO kablam! 
Sep 18 02:36:02.779 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:776:5
Sep 18 02:36:02.779 INFO kablam! stack backtrace:
Sep 18 02:36:02.779 INFO kablam!    0:     0x5649048c250e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::he3ea2af6595cbcfd
Sep 18 02:36:02.779 INFO kablam!                                at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49
Sep 18 02:36:02.779 INFO kablam!    1:     0x5649048b20d6 - std::sys_common::backtrace::print::h9a6dc25b0b6db3e6
Sep 18 02:36:02.779 INFO kablam!                                at libstd/sys_common/backtrace.rs:71
Sep 18 02:36:02.779 INFO kablam!                                at libstd/sys_common/backtrace.rs:59
Sep 18 02:36:02.779 INFO kablam!    2:     0x5649048b0a2d - std::panicking::default_hook::{{closure}}::h9f9f4c00fc62ac12
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panicking.rs:211
Sep 18 02:36:02.779 INFO kablam!    3:     0x5649048b07a0 - std::panicking::default_hook::h86ebe853ecef0f3c
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panicking.rs:227
Sep 18 02:36:02.779 INFO kablam!    4:     0x5649048b103c - std::panicking::rust_panic_with_hook::h6d3348b8dd4df56e
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panicking.rs:477
Sep 18 02:36:02.779 INFO kablam!    5:     0x5649048b0c39 - std::panicking::continue_panic_fmt::hf441f2da14f71300
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panicking.rs:391
Sep 18 02:36:02.779 INFO kablam!    6:     0x5649048b0b9d - std::panicking::begin_panic_fmt::h97631dc25adb41bb
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panicking.rs:346
Sep 18 02:36:02.779 INFO kablam!    7:     0x564904846cd1 - cmake::fail::h71f7d2616fd5caba
Sep 18 02:36:02.779 INFO kablam!                                at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:776
Sep 18 02:36:02.779 INFO kablam!    8:     0x56490484660a - cmake::run::h796f6ec01aeae688
Sep 18 02:36:02.779 INFO kablam!                                at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:757
Sep 18 02:36:02.779 INFO kablam!    9:     0x5649048421f9 - cmake::Config::build::he20777077fba7458
Sep 18 02:36:02.779 INFO kablam!                                at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.34/src/lib.rs:609
Sep 18 02:36:02.779 INFO kablam!   10:     0x56490483e329 - build_script_build::main::h5bff736360e5bcda
Sep 18 02:36:02.779 INFO kablam!                                at /source/build.rs:18
Sep 18 02:36:02.779 INFO kablam!   11:     0x56490483ecdf - std::rt::lang_start::{{closure}}::h4b0c7b4ced3a001d
Sep 18 02:36:02.779 INFO kablam!                                at libstd/rt.rs:74
Sep 18 02:36:02.779 INFO kablam!   12:     0x5649048b0ad2 - std::panicking::try::do_call::h46a7bcf1f6152e5b
Sep 18 02:36:02.779 INFO kablam!                                at libstd/rt.rs:59
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panicking.rs:310
Sep 18 02:36:02.779 INFO kablam!   13:     0x5649048d48d9 - __rust_maybe_catch_panic
Sep 18 02:36:02.779 INFO kablam!                                at libpanic_unwind/lib.rs:102
Sep 18 02:36:02.779 INFO kablam!   14:     0x5649048bd295 - std::rt::lang_start_internal::h221cb5896f5e061c
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panicking.rs:289
Sep 18 02:36:02.779 INFO kablam!                                at libstd/panic.rs:392
Sep 18 02:36:02.779 INFO kablam!                                at libstd/rt.rs:58
Sep 18 02:36:02.779 INFO kablam!   15:     0x56490483ecb7 - std::rt::lang_start::h30d7d09e1a3d420e
Sep 18 02:36:02.779 INFO kablam!                                at libstd/rt.rs:74
Sep 18 02:36:02.779 INFO kablam!   16:     0x56490483ec59 - main
Sep 18 02:36:02.779 INFO kablam!   17:     0x7f65004d882f - __libc_start_main
Sep 18 02:36:02.779 INFO kablam!   18:     0x56490483d968 - _start
Sep 18 02:36:02.779 INFO kablam!   19:                0x0 - <unknown>
Sep 18 02:36:02.779 INFO kablam! 
Sep 18 02:36:02.779 INFO kablam! su: No module specific data is present
Sep 18 02:36:03.314 INFO running `"docker" "rm" "-f" "18576ee3ab62149aeab9649ce68e05ce987f9a10530363a620598867facd4c8c"`
Sep 18 02:36:03.454 INFO blam! 18576ee3ab62149aeab9649ce68e05ce987f9a10530363a620598867facd4c8c