Sep 05 00:32:20.938 INFO checking chemfiles-sys-0.5.0 against master#2687112ea6a8701cbf36e6dd4d77d64694cf93d8 for pr-53913 Sep 05 00:32:20.938 INFO running: cargo +2687112ea6a8701cbf36e6dd4d77d64694cf93d8-alt check --frozen --all --all-targets Sep 05 00:32:20.938 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-1/pr-53913/master#2687112ea6a8701cbf36e6dd4d77d64694cf93d8:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53913/worker-1/master#2687112ea6a8701cbf36e6dd4d77d64694cf93d8:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +2687112ea6a8701cbf36e6dd4d77d64694cf93d8-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Sep 05 00:32:21.099 INFO blam! 7cab571ab5b3609a2e0745becbc3db7fbefc9cec2fc58453d31dcaf40b7d5401 Sep 05 00:32:21.100 INFO running `"docker" "start" "-a" "7cab571ab5b3609a2e0745becbc3db7fbefc9cec2fc58453d31dcaf40b7d5401"` Sep 05 00:32:21.681 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 05 00:32:26.485 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 05 00:32:26.485 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-debd32c01959ab3d/build-script-build` (exit code: 101) Sep 05 00:32:26.485 INFO kablam! --- stdout Sep 05 00:32:26.485 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-e9ede499fcd28e0e/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 05 00:32:26.485 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 05 00:32:26.486 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 05 00:32:26.486 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 05 00:32:26.486 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 05 00:32:26.486 INFO kablam! -- Detecting C compiler ABI info Sep 05 00:32:26.486 INFO kablam! -- Detecting C compiler ABI info - done Sep 05 00:32:26.486 INFO kablam! -- Detecting C compile features Sep 05 00:32:26.486 INFO kablam! -- Detecting C compile features - done Sep 05 00:32:26.486 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 05 00:32:26.486 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 05 00:32:26.486 INFO kablam! -- Detecting CXX compiler ABI info Sep 05 00:32:26.486 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 05 00:32:26.486 INFO kablam! -- Detecting CXX compile features Sep 05 00:32:26.486 INFO kablam! -- Detecting CXX compile features - done Sep 05 00:32:26.486 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 05 00:32:26.486 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 05 00:32:26.486 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 05 00:32:26.486 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 05 00:32:26.486 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 05 00:32:26.486 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 05 00:32:26.486 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 05 00:32:26.487 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 05 00:32:26.487 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 05 00:32:26.488 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 05 00:32:26.488 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 05 00:32:26.488 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 05 00:32:26.488 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 05 00:32:26.488 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 05 00:32:26.488 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 05 00:32:26.488 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 05 00:32:26.488 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 05 00:32:26.488 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 05 00:32:26.488 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 05 00:32:26.488 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 05 00:32:26.488 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 05 00:32:26.488 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 05 00:32:26.488 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 05 00:32:26.488 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 05 00:32:26.488 INFO kablam! -- Configuring incomplete, errors occurred! Sep 05 00:32:26.488 INFO kablam! See also "/target/debug/build/chemfiles-sys-e9ede499fcd28e0e/out/build/CMakeFiles/CMakeOutput.log". Sep 05 00:32:26.488 INFO kablam! See also "/target/debug/build/chemfiles-sys-e9ede499fcd28e0e/out/build/CMakeFiles/CMakeError.log". Sep 05 00:32:26.489 INFO kablam! Sep 05 00:32:26.489 INFO kablam! --- stderr Sep 05 00:32:26.489 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 05 00:32:26.489 INFO kablam! CMake Error: : System Error: Read-only file system Sep 05 00:32:26.489 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 05 00:32:26.489 INFO kablam! configure_file Problem configuring file Sep 05 00:32:26.489 INFO kablam! Call Stack (most recent call first): Sep 05 00:32:26.489 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 05 00:32:26.489 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 05 00:32:26.489 INFO kablam! Sep 05 00:32:26.489 INFO kablam! Sep 05 00:32:26.489 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 05 00:32:26.489 INFO kablam! CMake Error: : System Error: Read-only file system Sep 05 00:32:26.489 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 05 00:32:26.489 INFO kablam! configure_file Problem configuring file Sep 05 00:32:26.489 INFO kablam! Sep 05 00:32:26.489 INFO kablam! Sep 05 00:32:26.489 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 05 00:32:26.489 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 05 00:32:26.489 INFO kablam! Sep 05 00:32:26.489 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 05 00:32:26.489 INFO kablam! Sep 05 00:32:26.490 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 05 00:32:26.490 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 05 00:32:26.490 INFO kablam! information run "cmake --help-policy CMP0000". Sep 05 00:32:26.490 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 05 00:32:26.490 INFO kablam! Sep 05 00:32:26.490 INFO kablam! thread 'main' panicked at ' Sep 05 00:32:26.490 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 05 00:32:26.490 INFO kablam! Sep 05 00:32:26.490 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 05 00:32:26.490 INFO kablam! stack backtrace: Sep 05 00:32:26.490 INFO kablam! 0: 0x56247556970e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::he41721e5d0bd3faa Sep 05 00:32:26.490 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 05 00:32:26.490 INFO kablam! 1: 0x562475559316 - std::sys_common::backtrace::print::h27d79f31b374d779 Sep 05 00:32:26.490 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 05 00:32:26.490 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 05 00:32:26.490 INFO kablam! 2: 0x562475557c1d - std::panicking::default_hook::{{closure}}::h4c06e4d4f39d0ae6 Sep 05 00:32:26.490 INFO kablam! at libstd/panicking.rs:211 Sep 05 00:32:26.490 INFO kablam! 3: 0x562475557990 - std::panicking::default_hook::hf063f386db7b68b7 Sep 05 00:32:26.490 INFO kablam! at libstd/panicking.rs:227 Sep 05 00:32:26.490 INFO kablam! 4: 0x56247555822c - std::panicking::rust_panic_with_hook::h3b35cb326944f60c Sep 05 00:32:26.490 INFO kablam! at libstd/panicking.rs:477 Sep 05 00:32:26.490 INFO kablam! 5: 0x562475557e29 - std::panicking::continue_panic_fmt::h49dc352af3909309 Sep 05 00:32:26.491 INFO kablam! at libstd/panicking.rs:391 Sep 05 00:32:26.491 INFO kablam! 6: 0x562475557d8d - std::panicking::begin_panic_fmt::hcd6639e505ad59a0 Sep 05 00:32:26.491 INFO kablam! at libstd/panicking.rs:346 Sep 05 00:32:26.491 INFO kablam! 7: 0x5624754f6c61 - cmake::fail::h654ac90a04d2ad28 Sep 05 00:32:26.491 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 05 00:32:26.491 INFO kablam! 8: 0x5624754f659a - cmake::run::h74e7c89a61f14af4 Sep 05 00:32:26.491 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 05 00:32:26.491 INFO kablam! 9: 0x5624754f217e - cmake::Config::build::h0568d02e225a98a4 Sep 05 00:32:26.491 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 05 00:32:26.491 INFO kablam! 10: 0x5624754ef0f9 - build_script_build::main::h6e694c667f2a1225 Sep 05 00:32:26.491 INFO kablam! at /source/build.rs:18 Sep 05 00:32:26.491 INFO kablam! 11: 0x5624754ee8bf - std::rt::lang_start::{{closure}}::h65af5433315a828d Sep 05 00:32:26.491 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 05 00:32:26.491 INFO kablam! 12: 0x562475557cc2 - std::panicking::try::do_call::h1a26d0ebba7bf7c2 Sep 05 00:32:26.491 INFO kablam! at libstd/rt.rs:59 Sep 05 00:32:26.491 INFO kablam! at libstd/panicking.rs:310 Sep 05 00:32:26.491 INFO kablam! 13: 0x56247557c2d9 - __rust_maybe_catch_panic Sep 05 00:32:26.491 INFO kablam! at libpanic_unwind/lib.rs:103 Sep 05 00:32:26.491 INFO kablam! 14: 0x562475564435 - std::rt::lang_start_internal::h8b333a0a439d0823 Sep 05 00:32:26.491 INFO kablam! at libstd/panicking.rs:289 Sep 05 00:32:26.492 INFO kablam! at libstd/panic.rs:392 Sep 05 00:32:26.492 INFO kablam! at libstd/rt.rs:58 Sep 05 00:32:26.492 INFO kablam! 15: 0x5624754ee897 - std::rt::lang_start::h19fb4b9240b8ab4f Sep 05 00:32:26.492 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 05 00:32:26.492 INFO kablam! 16: 0x5624754efa29 - main Sep 05 00:32:26.492 INFO kablam! 17: 0x7fe8dc2b682f - __libc_start_main Sep 05 00:32:26.492 INFO kablam! 18: 0x5624754ed968 - _start Sep 05 00:32:26.492 INFO kablam! 19: 0x0 - Sep 05 00:32:26.492 INFO kablam! Sep 05 00:32:26.492 INFO kablam! su: No module specific data is present Sep 05 00:32:26.898 INFO running `"docker" "rm" "-f" "7cab571ab5b3609a2e0745becbc3db7fbefc9cec2fc58453d31dcaf40b7d5401"` Sep 05 00:32:26.991 INFO blam! 7cab571ab5b3609a2e0745becbc3db7fbefc9cec2fc58453d31dcaf40b7d5401