Sep 04 21:39:33.762 INFO checking chemfiles-sys-0.5.0 against master#28bcffead74d5e17c6cb1f7de432e37f93a6b50c for pr-53893 Sep 04 21:39:33.762 INFO running: cargo +28bcffead74d5e17c6cb1f7de432e37f93a6b50c-alt check --frozen --all --all-targets Sep 04 21:39:33.763 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-0/pr-53893/master#28bcffead74d5e17c6cb1f7de432e37f93a6b50c:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53893/worker-0/master#28bcffead74d5e17c6cb1f7de432e37f93a6b50c:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +28bcffead74d5e17c6cb1f7de432e37f93a6b50c-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Sep 04 21:39:33.922 INFO blam! e0945f38941996491b2b308e5205176d4776ef8cc62c257b9c3831f40c5ba5ee Sep 04 21:39:33.923 INFO running `"docker" "start" "-a" "e0945f38941996491b2b308e5205176d4776ef8cc62c257b9c3831f40c5ba5ee"` Sep 04 21:39:34.464 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 04 21:39:40.039 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 04 21:39:40.039 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-fdd394ab35b6099f/build-script-build` (exit code: 101) Sep 04 21:39:40.039 INFO kablam! --- stdout Sep 04 21:39:40.039 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-8ccb77d6038636f3/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 04 21:39:40.039 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 04 21:39:40.039 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 04 21:39:40.039 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 04 21:39:40.039 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 04 21:39:40.039 INFO kablam! -- Detecting C compiler ABI info Sep 04 21:39:40.039 INFO kablam! -- Detecting C compiler ABI info - done Sep 04 21:39:40.040 INFO kablam! -- Detecting C compile features Sep 04 21:39:40.040 INFO kablam! -- Detecting C compile features - done Sep 04 21:39:40.040 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 04 21:39:40.040 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 04 21:39:40.040 INFO kablam! -- Detecting CXX compiler ABI info Sep 04 21:39:40.040 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 04 21:39:40.040 INFO kablam! -- Detecting CXX compile features Sep 04 21:39:40.040 INFO kablam! -- Detecting CXX compile features - done Sep 04 21:39:40.040 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 04 21:39:40.040 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 04 21:39:40.040 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 04 21:39:40.040 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 04 21:39:40.040 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 04 21:39:40.041 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 04 21:39:40.041 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 04 21:39:40.041 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 04 21:39:40.041 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 04 21:39:40.041 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 04 21:39:40.042 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 04 21:39:40.042 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 04 21:39:40.042 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 04 21:39:40.042 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 04 21:39:40.042 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 04 21:39:40.042 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 04 21:39:40.042 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 04 21:39:40.042 INFO kablam! -- Configuring incomplete, errors occurred! Sep 04 21:39:40.042 INFO kablam! See also "/target/debug/build/chemfiles-sys-8ccb77d6038636f3/out/build/CMakeFiles/CMakeOutput.log". Sep 04 21:39:40.042 INFO kablam! See also "/target/debug/build/chemfiles-sys-8ccb77d6038636f3/out/build/CMakeFiles/CMakeError.log". Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.042 INFO kablam! --- stderr Sep 04 21:39:40.042 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 04 21:39:40.042 INFO kablam! CMake Error: : System Error: Read-only file system Sep 04 21:39:40.042 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 04 21:39:40.042 INFO kablam! configure_file Problem configuring file Sep 04 21:39:40.042 INFO kablam! Call Stack (most recent call first): Sep 04 21:39:40.042 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 04 21:39:40.042 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.042 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 04 21:39:40.042 INFO kablam! CMake Error: : System Error: Read-only file system Sep 04 21:39:40.042 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 04 21:39:40.042 INFO kablam! configure_file Problem configuring file Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.042 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 04 21:39:40.042 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.042 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.042 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 04 21:39:40.042 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 04 21:39:40.042 INFO kablam! information run "cmake --help-policy CMP0000". Sep 04 21:39:40.042 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 04 21:39:40.042 INFO kablam! Sep 04 21:39:40.043 INFO kablam! thread 'main' panicked at ' Sep 04 21:39:40.043 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 04 21:39:40.043 INFO kablam! Sep 04 21:39:40.043 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 04 21:39:40.043 INFO kablam! stack backtrace: Sep 04 21:39:40.043 INFO kablam! 0: 0x55cc4ea9c3fe - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h583ed2894c1db4e8 Sep 04 21:39:40.043 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 04 21:39:40.043 INFO kablam! 1: 0x55cc4ea8bf16 - std::sys_common::backtrace::print::hb03c547ea490e9e5 Sep 04 21:39:40.043 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 04 21:39:40.043 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 04 21:39:40.043 INFO kablam! 2: 0x55cc4ea8a80d - std::panicking::default_hook::{{closure}}::h74db1dbb754bb61b Sep 04 21:39:40.043 INFO kablam! at libstd/panicking.rs:211 Sep 04 21:39:40.043 INFO kablam! 3: 0x55cc4ea8a580 - std::panicking::default_hook::h00b2b50b7c826057 Sep 04 21:39:40.043 INFO kablam! at libstd/panicking.rs:227 Sep 04 21:39:40.043 INFO kablam! 4: 0x55cc4ea8ae1c - std::panicking::rust_panic_with_hook::h82a465b5cd0f7696 Sep 04 21:39:40.043 INFO kablam! at libstd/panicking.rs:477 Sep 04 21:39:40.043 INFO kablam! 5: 0x55cc4ea8aa19 - std::panicking::continue_panic_fmt::h176d70354b86e700 Sep 04 21:39:40.043 INFO kablam! at libstd/panicking.rs:391 Sep 04 21:39:40.043 INFO kablam! 6: 0x55cc4ea8a97d - std::panicking::begin_panic_fmt::h9d5bd774fc112331 Sep 04 21:39:40.043 INFO kablam! at libstd/panicking.rs:346 Sep 04 21:39:40.043 INFO kablam! 7: 0x55cc4ea28cd1 - cmake::fail::hd5e705de9593393e Sep 04 21:39:40.043 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 04 21:39:40.043 INFO kablam! 8: 0x55cc4ea2860a - cmake::run::h68eb5294ce819f34 Sep 04 21:39:40.043 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 04 21:39:40.043 INFO kablam! 9: 0x55cc4ea241ee - cmake::Config::build::hfc0035b86c826139 Sep 04 21:39:40.043 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 04 21:39:40.043 INFO kablam! 10: 0x55cc4ea20ad9 - build_script_build::main::h7265d47fa6f41caa Sep 04 21:39:40.043 INFO kablam! at /source/build.rs:18 Sep 04 21:39:40.043 INFO kablam! 11: 0x55cc4ea1ff8f - std::rt::lang_start::{{closure}}::hafb4842852a30c70 Sep 04 21:39:40.043 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 04 21:39:40.043 INFO kablam! 12: 0x55cc4ea8a8b2 - std::panicking::try::do_call::hd86a9acb4a664678 Sep 04 21:39:40.043 INFO kablam! at libstd/rt.rs:59 Sep 04 21:39:40.043 INFO kablam! at libstd/panicking.rs:310 Sep 04 21:39:40.043 INFO kablam! 13: 0x55cc4eaae469 - __rust_maybe_catch_panic Sep 04 21:39:40.043 INFO kablam! at libpanic_unwind/lib.rs:103 Sep 04 21:39:40.043 INFO kablam! 14: 0x55cc4ea970d5 - std::rt::lang_start_internal::h8264bc6ad8e6b565 Sep 04 21:39:40.043 INFO kablam! at libstd/panicking.rs:289 Sep 04 21:39:40.044 INFO kablam! at libstd/panic.rs:392 Sep 04 21:39:40.044 INFO kablam! at libstd/rt.rs:58 Sep 04 21:39:40.044 INFO kablam! 15: 0x55cc4ea1ff67 - std::rt::lang_start::he739fc87542c206c Sep 04 21:39:40.044 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 04 21:39:40.044 INFO kablam! 16: 0x55cc4ea21409 - main Sep 04 21:39:40.044 INFO kablam! 17: 0x7f23bc07a82f - __libc_start_main Sep 04 21:39:40.044 INFO kablam! 18: 0x55cc4ea1f9d8 - _start Sep 04 21:39:40.044 INFO kablam! 19: 0x0 - Sep 04 21:39:40.044 INFO kablam! Sep 04 21:39:40.044 INFO kablam! su: No module specific data is present Sep 04 21:39:40.383 INFO running `"docker" "rm" "-f" "e0945f38941996491b2b308e5205176d4776ef8cc62c257b9c3831f40c5ba5ee"` Sep 04 21:39:40.476 INFO blam! e0945f38941996491b2b308e5205176d4776ef8cc62c257b9c3831f40c5ba5ee