Sep 06 05:35:16.326 INFO checking heme-0.3.1 against master#1c2e17f4e3a2070a7f703f51e29c1c388ef703b6 for pr-53854
Sep 06 05:35:16.326 INFO running: cargo +1c2e17f4e3a2070a7f703f51e29c1c388ef703b6-alt check --frozen --all --all-targets
Sep 06 05:35:16.326 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-3/pr-53854/master#1c2e17f4e3a2070a7f703f51e29c1c388ef703b6:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53854/worker-3/master#1c2e17f4e3a2070a7f703f51e29c1c388ef703b6:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +1c2e17f4e3a2070a7f703f51e29c1c388ef703b6-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"`
Sep 06 05:35:16.503 INFO blam! 88c08bdf412bfbcefcb300203766490026503e9048114d78ef5367c4449b93fa
Sep 06 05:35:16.505 INFO running `"docker" "start" "-a" "88c08bdf412bfbcefcb300203766490026503e9048114d78ef5367c4449b93fa"`
Sep 06 05:35:17.472 INFO kablam! usermod: no changes
Sep 06 05:35:17.510 INFO kablam!     Checking heme v0.3.1 (file:///source)
Sep 06 05:35:17.786 INFO kablam! warning: unused import: `std::collections::HashMap`
Sep 06 05:35:17.786 INFO kablam!  --> src/sampling.rs:1:5
Sep 06 05:35:17.786 INFO kablam!   |
Sep 06 05:35:17.786 INFO kablam! 1 | use std::collections::HashMap; 
Sep 06 05:35:17.786 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Sep 06 05:35:17.786 INFO kablam!   |
Sep 06 05:35:17.786 INFO kablam!   = note: #[warn(unused_imports)] on by default
Sep 06 05:35:17.786 INFO kablam! 
Sep 06 05:35:17.867 INFO kablam! warning: unused import: `std::collections::HashMap`
Sep 06 05:35:17.867 INFO kablam!  --> src/sampling.rs:1:5
Sep 06 05:35:17.867 INFO kablam!   |
Sep 06 05:35:17.867 INFO kablam! 1 | use std::collections::HashMap; 
Sep 06 05:35:17.867 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Sep 06 05:35:17.867 INFO kablam!   |
Sep 06 05:35:17.867 INFO kablam!   = note: #[warn(unused_imports)] on by default
Sep 06 05:35:17.867 INFO kablam! 
Sep 06 05:35:17.904 INFO kablam! warning: unused variable: `protocol_name`
Sep 06 05:35:17.904 INFO kablam!   --> src/sampling.rs:20:21
Sep 06 05:35:17.904 INFO kablam!    |
Sep 06 05:35:17.904 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Sep 06 05:35:17.904 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Sep 06 05:35:17.904 INFO kablam!    |
Sep 06 05:35:17.904 INFO kablam!    = note: #[warn(unused_variables)] on by default
Sep 06 05:35:17.904 INFO kablam! 
Sep 06 05:35:17.909 INFO kablam! warning: unused variable: `a1`
Sep 06 05:35:17.909 INFO kablam!   --> src/scoring.rs:24:39
Sep 06 05:35:17.909 INFO kablam!    |
Sep 06 05:35:17.909 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 06 05:35:17.909 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Sep 06 05:35:17.909 INFO kablam! 
Sep 06 05:35:17.909 INFO kablam! warning: unused variable: `a2`
Sep 06 05:35:17.909 INFO kablam!   --> src/scoring.rs:24:50
Sep 06 05:35:17.909 INFO kablam!    |
Sep 06 05:35:17.909 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 06 05:35:17.909 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Sep 06 05:35:17.909 INFO kablam! 
Sep 06 05:35:17.944 INFO kablam! warning: field is never used: `atoms`
Sep 06 05:35:17.944 INFO kablam!   --> src/conformation.rs:52:5
Sep 06 05:35:17.944 INFO kablam!    |
Sep 06 05:35:17.944 INFO kablam! 52 |     atoms: Vec<Atom>,
Sep 06 05:35:17.944 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Sep 06 05:35:17.944 INFO kablam!    |
Sep 06 05:35:17.944 INFO kablam!    = note: #[warn(dead_code)] on by default
Sep 06 05:35:17.944 INFO kablam! 
Sep 06 05:35:17.944 INFO kablam! warning: field is never used: `residue_name`
Sep 06 05:35:17.944 INFO kablam!   --> src/conformation.rs:53:5
Sep 06 05:35:17.944 INFO kablam!    |
Sep 06 05:35:17.944 INFO kablam! 53 |     residue_name: String,
Sep 06 05:35:17.944 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Sep 06 05:35:17.945 INFO kablam! 
Sep 06 05:35:17.945 INFO kablam! warning: field is never used: `residue_index`
Sep 06 05:35:17.945 INFO kablam!   --> src/conformation.rs:54:5
Sep 06 05:35:17.945 INFO kablam!    |
Sep 06 05:35:17.945 INFO kablam! 54 |     residue_index: i32,
Sep 06 05:35:17.945 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Sep 06 05:35:17.945 INFO kablam! 
Sep 06 05:35:17.987 INFO kablam! warning: unused variable: `protocol_name`
Sep 06 05:35:17.987 INFO kablam!   --> src/sampling.rs:20:21
Sep 06 05:35:17.987 INFO kablam!    |
Sep 06 05:35:17.987 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Sep 06 05:35:17.987 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Sep 06 05:35:17.987 INFO kablam!    |
Sep 06 05:35:17.987 INFO kablam!    = note: #[warn(unused_variables)] on by default
Sep 06 05:35:17.987 INFO kablam! 
Sep 06 05:35:17.987 INFO kablam! warning: unused variable: `a1`
Sep 06 05:35:17.987 INFO kablam!   --> src/scoring.rs:24:39
Sep 06 05:35:17.987 INFO kablam!    |
Sep 06 05:35:17.987 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 06 05:35:17.987 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Sep 06 05:35:17.987 INFO kablam! 
Sep 06 05:35:17.989 INFO kablam! warning: unused variable: `a2`
Sep 06 05:35:17.989 INFO kablam!   --> src/scoring.rs:24:50
Sep 06 05:35:17.989 INFO kablam!    |
Sep 06 05:35:17.989 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 06 05:35:17.989 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Sep 06 05:35:17.989 INFO kablam! 
Sep 06 05:35:18.006 INFO kablam! warning: field is never used: `atoms`
Sep 06 05:35:18.006 INFO kablam!   --> src/conformation.rs:52:5
Sep 06 05:35:18.006 INFO kablam!    |
Sep 06 05:35:18.006 INFO kablam! 52 |     atoms: Vec<Atom>,
Sep 06 05:35:18.006 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Sep 06 05:35:18.006 INFO kablam!    |
Sep 06 05:35:18.006 INFO kablam!    = note: #[warn(dead_code)] on by default
Sep 06 05:35:18.006 INFO kablam! 
Sep 06 05:35:18.006 INFO kablam! warning: field is never used: `residue_name`
Sep 06 05:35:18.006 INFO kablam!   --> src/conformation.rs:53:5
Sep 06 05:35:18.006 INFO kablam!    |
Sep 06 05:35:18.006 INFO kablam! 53 |     residue_name: String,
Sep 06 05:35:18.006 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Sep 06 05:35:18.006 INFO kablam! 
Sep 06 05:35:18.006 INFO kablam! warning: field is never used: `residue_index`
Sep 06 05:35:18.006 INFO kablam!   --> src/conformation.rs:54:5
Sep 06 05:35:18.006 INFO kablam!    |
Sep 06 05:35:18.006 INFO kablam! 54 |     residue_index: i32,
Sep 06 05:35:18.006 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Sep 06 05:35:18.006 INFO kablam! 
Sep 06 05:35:18.009 INFO kablam! warning: function `H` should have a snake case name such as `h`
Sep 06 05:35:18.009 INFO kablam!    --> src/io.rs:152:9
Sep 06 05:35:18.009 INFO kablam!     |
Sep 06 05:35:18.009 INFO kablam! 152 | /         fn H(l: &f64) -> f64 {
Sep 06 05:35:18.009 INFO kablam! 153 | |
Sep 06 05:35:18.009 INFO kablam! 154 | |             // bounds of N choose lN
Sep 06 05:35:18.009 INFO kablam! 155 | |             // can be found by 2^(n*H(l))
Sep 06 05:35:18.009 INFO kablam! ...   |
Sep 06 05:35:18.009 INFO kablam! 161 | |             l.ln() - value * value.ln()
Sep 06 05:35:18.009 INFO kablam! 162 | |         }
Sep 06 05:35:18.009 INFO kablam!     | |_________^
Sep 06 05:35:18.009 INFO kablam!     |
Sep 06 05:35:18.009 INFO kablam!     = note: #[warn(non_snake_case)] on by default
Sep 06 05:35:18.009 INFO kablam! 
Sep 06 05:35:18.456 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 0.95s
Sep 06 05:35:18.457 INFO kablam! su: No module specific data is present
Sep 06 05:35:19.317 INFO running `"docker" "rm" "-f" "88c08bdf412bfbcefcb300203766490026503e9048114d78ef5367c4449b93fa"`
Sep 06 05:35:19.423 INFO blam! 88c08bdf412bfbcefcb300203766490026503e9048114d78ef5367c4449b93fa