Sep 06 08:51:25.583 INFO checking chemfiles-sys-0.5.0 against master#1c2e17f4e3a2070a7f703f51e29c1c388ef703b6 for pr-53854 Sep 06 08:51:25.583 INFO running: cargo +1c2e17f4e3a2070a7f703f51e29c1c388ef703b6-alt check --frozen --all --all-targets Sep 06 08:51:25.583 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-4/pr-53854/master#1c2e17f4e3a2070a7f703f51e29c1c388ef703b6:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53854/worker-4/master#1c2e17f4e3a2070a7f703f51e29c1c388ef703b6:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +1c2e17f4e3a2070a7f703f51e29c1c388ef703b6-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Sep 06 08:51:25.800 INFO blam! 3db8c55974e486609891f37e5450b3e550c127ca25aa48554eafde7a996dc3e8 Sep 06 08:51:25.802 INFO running `"docker" "start" "-a" "3db8c55974e486609891f37e5450b3e550c127ca25aa48554eafde7a996dc3e8"` Sep 06 08:51:26.706 INFO kablam! usermod: no changes Sep 06 08:51:26.756 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 06 08:51:31.871 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 06 08:51:31.871 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-694aaf20f28672d6/build-script-build` (exit code: 101) Sep 06 08:51:31.871 INFO kablam! --- stdout Sep 06 08:51:31.871 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-91cb040a33047599/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 06 08:51:31.871 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 06 08:51:31.871 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 06 08:51:31.871 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 06 08:51:31.871 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 06 08:51:31.871 INFO kablam! -- Detecting C compiler ABI info Sep 06 08:51:31.871 INFO kablam! -- Detecting C compiler ABI info - done Sep 06 08:51:31.871 INFO kablam! -- Detecting C compile features Sep 06 08:51:31.871 INFO kablam! -- Detecting C compile features - done Sep 06 08:51:31.871 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 06 08:51:31.871 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 06 08:51:31.871 INFO kablam! -- Detecting CXX compiler ABI info Sep 06 08:51:31.871 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 06 08:51:31.871 INFO kablam! -- Detecting CXX compile features Sep 06 08:51:31.871 INFO kablam! -- Detecting CXX compile features - done Sep 06 08:51:31.871 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 06 08:51:31.871 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 06 08:51:31.871 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 06 08:51:31.871 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 06 08:51:31.871 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 06 08:51:31.872 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 06 08:51:31.872 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 06 08:51:31.872 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 06 08:51:31.872 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 06 08:51:31.872 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 06 08:51:31.872 INFO kablam! -- Configuring incomplete, errors occurred! Sep 06 08:51:31.872 INFO kablam! See also "/target/debug/build/chemfiles-sys-91cb040a33047599/out/build/CMakeFiles/CMakeOutput.log". Sep 06 08:51:31.872 INFO kablam! See also "/target/debug/build/chemfiles-sys-91cb040a33047599/out/build/CMakeFiles/CMakeError.log". Sep 06 08:51:31.872 INFO kablam! Sep 06 08:51:31.872 INFO kablam! --- stderr Sep 06 08:51:31.872 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 06 08:51:31.872 INFO kablam! CMake Error: : System Error: Read-only file system Sep 06 08:51:31.872 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 06 08:51:31.872 INFO kablam! configure_file Problem configuring file Sep 06 08:51:31.872 INFO kablam! Call Stack (most recent call first): Sep 06 08:51:31.872 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 06 08:51:31.872 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 06 08:51:31.872 INFO kablam! Sep 06 08:51:31.872 INFO kablam! Sep 06 08:51:31.872 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 06 08:51:31.872 INFO kablam! CMake Error: : System Error: Read-only file system Sep 06 08:51:31.872 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 06 08:51:31.872 INFO kablam! configure_file Problem configuring file Sep 06 08:51:31.872 INFO kablam! Sep 06 08:51:31.873 INFO kablam! Sep 06 08:51:31.873 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 06 08:51:31.873 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 06 08:51:31.875 INFO kablam! Sep 06 08:51:31.875 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 06 08:51:31.875 INFO kablam! Sep 06 08:51:31.875 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 06 08:51:31.875 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 06 08:51:31.875 INFO kablam! information run "cmake --help-policy CMP0000". Sep 06 08:51:31.875 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 06 08:51:31.875 INFO kablam! Sep 06 08:51:31.875 INFO kablam! thread 'main' panicked at ' Sep 06 08:51:31.875 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 06 08:51:31.875 INFO kablam! Sep 06 08:51:31.875 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 06 08:51:31.875 INFO kablam! stack backtrace: Sep 06 08:51:31.875 INFO kablam! 0: 0x558e185c771e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h082e5fdf9aff33df Sep 06 08:51:31.875 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 06 08:51:31.875 INFO kablam! 1: 0x558e185b7316 - std::sys_common::backtrace::print::hef53554d827c8c8b Sep 06 08:51:31.875 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 06 08:51:31.875 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 06 08:51:31.875 INFO kablam! 2: 0x558e185b5c1d - std::panicking::default_hook::{{closure}}::h34861d43158e89b9 Sep 06 08:51:31.875 INFO kablam! at libstd/panicking.rs:211 Sep 06 08:51:31.875 INFO kablam! 3: 0x558e185b5990 - std::panicking::default_hook::h8898fb997741a086 Sep 06 08:51:31.875 INFO kablam! at libstd/panicking.rs:227 Sep 06 08:51:31.875 INFO kablam! 4: 0x558e185b622c - std::panicking::rust_panic_with_hook::h2a2e767b3fe52fcb Sep 06 08:51:31.875 INFO kablam! at libstd/panicking.rs:477 Sep 06 08:51:31.875 INFO kablam! 5: 0x558e185b5e29 - std::panicking::continue_panic_fmt::h2ca0f17b68b08aea Sep 06 08:51:31.875 INFO kablam! at libstd/panicking.rs:391 Sep 06 08:51:31.875 INFO kablam! 6: 0x558e185b5d8d - std::panicking::begin_panic_fmt::h532d3513d4e13135 Sep 06 08:51:31.875 INFO kablam! at libstd/panicking.rs:346 Sep 06 08:51:31.875 INFO kablam! 7: 0x558e18554c61 - cmake::fail::hc9171aff7d822d3f Sep 06 08:51:31.875 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 06 08:51:31.875 INFO kablam! 8: 0x558e1855459a - cmake::run::hb08d89141377ea3b Sep 06 08:51:31.875 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 06 08:51:31.875 INFO kablam! 9: 0x558e1855017e - cmake::Config::build::he0560e7c88e1fe9a Sep 06 08:51:31.875 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 06 08:51:31.875 INFO kablam! 10: 0x558e1854bf59 - build_script_build::main::h9d1fe8a459812c05 Sep 06 08:51:31.875 INFO kablam! at /source/build.rs:18 Sep 06 08:51:31.875 INFO kablam! 11: 0x558e1854d4af - std::rt::lang_start::{{closure}}::h94dacd3bb043d9a5 Sep 06 08:51:31.875 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 06 08:51:31.875 INFO kablam! 12: 0x558e185b5cc2 - std::panicking::try::do_call::hd6568c1e1325fac3 Sep 06 08:51:31.875 INFO kablam! at libstd/rt.rs:59 Sep 06 08:51:31.875 INFO kablam! at libstd/panicking.rs:310 Sep 06 08:51:31.875 INFO kablam! 13: 0x558e185da2e9 - __rust_maybe_catch_panic Sep 06 08:51:31.875 INFO kablam! at libpanic_unwind/lib.rs:103 Sep 06 08:51:31.875 INFO kablam! 14: 0x558e185c2445 - std::rt::lang_start_internal::hf4a29d9afcf3f720 Sep 06 08:51:31.875 INFO kablam! at libstd/panicking.rs:289 Sep 06 08:51:31.875 INFO kablam! at libstd/panic.rs:392 Sep 06 08:51:31.875 INFO kablam! at libstd/rt.rs:58 Sep 06 08:51:31.875 INFO kablam! 15: 0x558e1854d487 - std::rt::lang_start::h90cc108792c99bf7 Sep 06 08:51:31.875 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 06 08:51:31.875 INFO kablam! 16: 0x558e1854c889 - main Sep 06 08:51:31.875 INFO kablam! 17: 0x7f15730bc82f - __libc_start_main Sep 06 08:51:31.876 INFO kablam! 18: 0x558e1854b968 - _start Sep 06 08:51:31.876 INFO kablam! 19: 0x0 - Sep 06 08:51:31.876 INFO kablam! Sep 06 08:51:31.876 INFO kablam! su: No module specific data is present Sep 06 08:51:32.331 INFO running `"docker" "rm" "-f" "3db8c55974e486609891f37e5450b3e550c127ca25aa48554eafde7a996dc3e8"` Sep 06 08:51:32.414 INFO blam! 3db8c55974e486609891f37e5450b3e550c127ca25aa48554eafde7a996dc3e8