Sep 02 18:19:54.379 INFO checking chemfiles-sys-0.5.0 against master#1114ab684fbad001c4e580326d8eb4d8c4e917d3 for pr-53851 Sep 02 18:19:54.379 INFO running: cargo +1114ab684fbad001c4e580326d8eb4d8c4e917d3-alt check --frozen --all --all-targets Sep 02 18:19:54.379 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-2/pr-53851/master#1114ab684fbad001c4e580326d8eb4d8c4e917d3:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53851/worker-2/master#1114ab684fbad001c4e580326d8eb4d8c4e917d3:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +1114ab684fbad001c4e580326d8eb4d8c4e917d3-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Sep 02 18:19:54.551 INFO blam! 56cd6a124081c8807b972294a16f352c9cb0e85032c2bb380b0d94b577212a64 Sep 02 18:19:54.553 INFO running `"docker" "start" "-a" "56cd6a124081c8807b972294a16f352c9cb0e85032c2bb380b0d94b577212a64"` Sep 02 18:19:55.106 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 02 18:20:00.747 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 02 18:20:00.748 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-9faba8596a5b917e/build-script-build` (exit code: 101) Sep 02 18:20:00.748 INFO kablam! --- stdout Sep 02 18:20:00.748 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-818f38fa8ccdb8a0/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 02 18:20:00.748 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 02 18:20:00.748 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 02 18:20:00.748 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 02 18:20:00.748 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 02 18:20:00.748 INFO kablam! -- Detecting C compiler ABI info Sep 02 18:20:00.748 INFO kablam! -- Detecting C compiler ABI info - done Sep 02 18:20:00.748 INFO kablam! -- Detecting C compile features Sep 02 18:20:00.748 INFO kablam! -- Detecting C compile features - done Sep 02 18:20:00.748 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 02 18:20:00.748 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 02 18:20:00.748 INFO kablam! -- Detecting CXX compiler ABI info Sep 02 18:20:00.748 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 02 18:20:00.748 INFO kablam! -- Detecting CXX compile features Sep 02 18:20:00.748 INFO kablam! -- Detecting CXX compile features - done Sep 02 18:20:00.748 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 02 18:20:00.748 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 02 18:20:00.749 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 02 18:20:00.749 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 02 18:20:00.749 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 02 18:20:00.750 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 02 18:20:00.750 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 02 18:20:00.751 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 02 18:20:00.751 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 02 18:20:00.752 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 02 18:20:00.752 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 02 18:20:00.752 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 02 18:20:00.752 INFO kablam! -- Configuring incomplete, errors occurred! Sep 02 18:20:00.752 INFO kablam! See also "/target/debug/build/chemfiles-sys-818f38fa8ccdb8a0/out/build/CMakeFiles/CMakeOutput.log". Sep 02 18:20:00.752 INFO kablam! See also "/target/debug/build/chemfiles-sys-818f38fa8ccdb8a0/out/build/CMakeFiles/CMakeError.log". Sep 02 18:20:00.752 INFO kablam! Sep 02 18:20:00.752 INFO kablam! --- stderr Sep 02 18:20:00.752 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 02 18:20:00.752 INFO kablam! CMake Error: : System Error: Read-only file system Sep 02 18:20:00.752 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 02 18:20:00.752 INFO kablam! configure_file Problem configuring file Sep 02 18:20:00.753 INFO kablam! Call Stack (most recent call first): Sep 02 18:20:00.753 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 02 18:20:00.753 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 02 18:20:00.753 INFO kablam! Sep 02 18:20:00.753 INFO kablam! Sep 02 18:20:00.753 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 02 18:20:00.753 INFO kablam! CMake Error: : System Error: Read-only file system Sep 02 18:20:00.753 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 02 18:20:00.753 INFO kablam! configure_file Problem configuring file Sep 02 18:20:00.753 INFO kablam! Sep 02 18:20:00.753 INFO kablam! Sep 02 18:20:00.753 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 02 18:20:00.753 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 02 18:20:00.753 INFO kablam! Sep 02 18:20:00.753 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 02 18:20:00.753 INFO kablam! Sep 02 18:20:00.753 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 02 18:20:00.753 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 02 18:20:00.753 INFO kablam! information run "cmake --help-policy CMP0000". Sep 02 18:20:00.753 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 02 18:20:00.754 INFO kablam! Sep 02 18:20:00.754 INFO kablam! thread 'main' panicked at ' Sep 02 18:20:00.754 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 02 18:20:00.754 INFO kablam! Sep 02 18:20:00.754 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 02 18:20:00.754 INFO kablam! stack backtrace: Sep 02 18:20:00.754 INFO kablam! 0: 0x55feee2fe89e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::ha200f2cd684ebd49 Sep 02 18:20:00.754 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 02 18:20:00.754 INFO kablam! 1: 0x55feee2ee4e6 - std::sys_common::backtrace::print::hfe3d4e47b4c8e48c Sep 02 18:20:00.754 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 02 18:20:00.754 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 02 18:20:00.754 INFO kablam! 2: 0x55feee2ecdad - std::panicking::default_hook::{{closure}}::hf56af31102a42941 Sep 02 18:20:00.754 INFO kablam! at libstd/panicking.rs:211 Sep 02 18:20:00.754 INFO kablam! 3: 0x55feee2ecb20 - std::panicking::default_hook::ha51b5d4eb7ec526d Sep 02 18:20:00.754 INFO kablam! at libstd/panicking.rs:227 Sep 02 18:20:00.754 INFO kablam! 4: 0x55feee2ed3bc - std::panicking::rust_panic_with_hook::hd585483f9daec810 Sep 02 18:20:00.754 INFO kablam! at libstd/panicking.rs:477 Sep 02 18:20:00.754 INFO kablam! 5: 0x55feee2ecfb9 - std::panicking::continue_panic_fmt::h918075cde557b461 Sep 02 18:20:00.754 INFO kablam! at libstd/panicking.rs:391 Sep 02 18:20:00.755 INFO kablam! 6: 0x55feee2ecf1d - std::panicking::begin_panic_fmt::h5e5c6b72bacdc05a Sep 02 18:20:00.755 INFO kablam! at libstd/panicking.rs:346 Sep 02 18:20:00.755 INFO kablam! 7: 0x55feee28ada1 - cmake::fail::hc896779924d2595c Sep 02 18:20:00.755 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 02 18:20:00.755 INFO kablam! 8: 0x55feee28a6e0 - cmake::run::hfee576669e7999ed Sep 02 18:20:00.755 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 02 18:20:00.755 INFO kablam! 9: 0x55feee28626e - cmake::Config::build::h499fc81a2c78d1b5 Sep 02 18:20:00.755 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 02 18:20:00.755 INFO kablam! 10: 0x55feee283035 - build_script_build::main::h00fd8587812b7fed Sep 02 18:20:00.755 INFO kablam! at /source/build.rs:18 Sep 02 18:20:00.755 INFO kablam! 11: 0x55feee281b5f - std::rt::lang_start::{{closure}}::h9cdadf07a5b6e207 Sep 02 18:20:00.755 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 02 18:20:00.755 INFO kablam! 12: 0x55feee2ece52 - std::panicking::try::do_call::hea63f5620482e896 Sep 02 18:20:00.755 INFO kablam! at libstd/rt.rs:59 Sep 02 18:20:00.755 INFO kablam! at libstd/panicking.rs:310 Sep 02 18:20:00.755 INFO kablam! 13: 0x55feee310639 - __rust_maybe_catch_panic Sep 02 18:20:00.755 INFO kablam! at libpanic_unwind/lib.rs:103 Sep 02 18:20:00.755 INFO kablam! 14: 0x55feee2f9595 - std::rt::lang_start_internal::hfd6e69240f0360f8 Sep 02 18:20:00.756 INFO kablam! at libstd/panicking.rs:289 Sep 02 18:20:00.756 INFO kablam! at libstd/panic.rs:392 Sep 02 18:20:00.756 INFO kablam! at libstd/rt.rs:58 Sep 02 18:20:00.756 INFO kablam! 15: 0x55feee281b37 - std::rt::lang_start::hd6c0046e48611a02 Sep 02 18:20:00.756 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 02 18:20:00.756 INFO kablam! 16: 0x55feee283979 - main Sep 02 18:20:00.756 INFO kablam! 17: 0x7f3881b6282f - __libc_start_main Sep 02 18:20:00.756 INFO kablam! 18: 0x55feee2819d8 - _start Sep 02 18:20:00.756 INFO kablam! 19: 0x0 - Sep 02 18:20:00.756 INFO kablam! Sep 02 18:20:00.756 INFO kablam! su: No module specific data is present Sep 02 18:20:01.100 INFO running `"docker" "rm" "-f" "56cd6a124081c8807b972294a16f352c9cb0e85032c2bb380b0d94b577212a64"` Sep 02 18:20:01.207 INFO blam! 56cd6a124081c8807b972294a16f352c9cb0e85032c2bb380b0d94b577212a64