Sep 02 00:47:00.070 INFO checking chemfiles-sys-0.5.0 against try#aa245a5862056b681d2ccdb178f58891108cd3a6 for pr-53831 Sep 02 00:47:00.070 INFO running: cargo +aa245a5862056b681d2ccdb178f58891108cd3a6-alt check --frozen --all --all-targets Sep 02 00:47:00.070 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-3/pr-53831/try#aa245a5862056b681d2ccdb178f58891108cd3a6:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53831/worker-3/try#aa245a5862056b681d2ccdb178f58891108cd3a6:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +aa245a5862056b681d2ccdb178f58891108cd3a6-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Sep 02 00:47:00.311 INFO blam! b310a29d2adf71fd9bbb2951a25938b5448bb9de394293d0a4c1c01720ebed0f Sep 02 00:47:00.313 INFO running `"docker" "start" "-a" "b310a29d2adf71fd9bbb2951a25938b5448bb9de394293d0a4c1c01720ebed0f"` Sep 02 00:47:00.992 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 02 00:47:05.614 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 02 00:47:05.615 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-c421f39fda4f2d73/build-script-build` (exit code: 101) Sep 02 00:47:05.615 INFO kablam! --- stdout Sep 02 00:47:05.615 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-15b9f73c577993e0/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 02 00:47:05.615 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 02 00:47:05.615 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 02 00:47:05.615 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 02 00:47:05.615 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 02 00:47:05.615 INFO kablam! -- Detecting C compiler ABI info Sep 02 00:47:05.615 INFO kablam! -- Detecting C compiler ABI info - done Sep 02 00:47:05.615 INFO kablam! -- Detecting C compile features Sep 02 00:47:05.615 INFO kablam! -- Detecting C compile features - done Sep 02 00:47:05.615 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 02 00:47:05.615 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 02 00:47:05.615 INFO kablam! -- Detecting CXX compiler ABI info Sep 02 00:47:05.615 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 02 00:47:05.615 INFO kablam! -- Detecting CXX compile features Sep 02 00:47:05.615 INFO kablam! -- Detecting CXX compile features - done Sep 02 00:47:05.615 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 02 00:47:05.615 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 02 00:47:05.615 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 02 00:47:05.615 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 02 00:47:05.615 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 02 00:47:05.615 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 02 00:47:05.615 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 02 00:47:05.615 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 02 00:47:05.615 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 02 00:47:05.616 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 02 00:47:05.616 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 02 00:47:05.617 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 02 00:47:05.617 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 02 00:47:05.618 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 02 00:47:05.618 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 02 00:47:05.618 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 02 00:47:05.618 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 02 00:47:05.618 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 02 00:47:05.618 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 02 00:47:05.618 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 02 00:47:05.618 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 02 00:47:05.618 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 02 00:47:05.618 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 02 00:47:05.618 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 02 00:47:05.618 INFO kablam! -- Configuring incomplete, errors occurred! Sep 02 00:47:05.618 INFO kablam! See also "/target/debug/build/chemfiles-sys-15b9f73c577993e0/out/build/CMakeFiles/CMakeOutput.log". Sep 02 00:47:05.618 INFO kablam! See also "/target/debug/build/chemfiles-sys-15b9f73c577993e0/out/build/CMakeFiles/CMakeError.log". Sep 02 00:47:05.619 INFO kablam! Sep 02 00:47:05.619 INFO kablam! --- stderr Sep 02 00:47:05.619 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 02 00:47:05.619 INFO kablam! CMake Error: : System Error: Read-only file system Sep 02 00:47:05.619 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 02 00:47:05.619 INFO kablam! configure_file Problem configuring file Sep 02 00:47:05.619 INFO kablam! Call Stack (most recent call first): Sep 02 00:47:05.619 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 02 00:47:05.619 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 02 00:47:05.619 INFO kablam! Sep 02 00:47:05.619 INFO kablam! Sep 02 00:47:05.619 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 02 00:47:05.619 INFO kablam! CMake Error: : System Error: Read-only file system Sep 02 00:47:05.619 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 02 00:47:05.619 INFO kablam! configure_file Problem configuring file Sep 02 00:47:05.619 INFO kablam! Sep 02 00:47:05.619 INFO kablam! Sep 02 00:47:05.619 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 02 00:47:05.619 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 02 00:47:05.619 INFO kablam! Sep 02 00:47:05.619 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 02 00:47:05.620 INFO kablam! Sep 02 00:47:05.620 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 02 00:47:05.620 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 02 00:47:05.620 INFO kablam! information run "cmake --help-policy CMP0000". Sep 02 00:47:05.620 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 02 00:47:05.620 INFO kablam! Sep 02 00:47:05.620 INFO kablam! thread 'main' panicked at ' Sep 02 00:47:05.620 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 02 00:47:05.620 INFO kablam! Sep 02 00:47:05.620 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 02 00:47:05.620 INFO kablam! stack backtrace: Sep 02 00:47:05.620 INFO kablam! 0: 0x55574cc8987e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h9bce1f9a537b140d Sep 02 00:47:05.620 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 02 00:47:05.620 INFO kablam! 1: 0x55574cc794f6 - std::sys_common::backtrace::print::h7cc2650c15d0dddd Sep 02 00:47:05.620 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 02 00:47:05.620 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 02 00:47:05.620 INFO kablam! 2: 0x55574cc77dbd - std::panicking::default_hook::{{closure}}::hec52538d990412d0 Sep 02 00:47:05.620 INFO kablam! at libstd/panicking.rs:211 Sep 02 00:47:05.620 INFO kablam! 3: 0x55574cc77b30 - std::panicking::default_hook::h49c7c9d5f399092e Sep 02 00:47:05.620 INFO kablam! at libstd/panicking.rs:227 Sep 02 00:47:05.620 INFO kablam! 4: 0x55574cc783cc - std::panicking::rust_panic_with_hook::h56b934afa6264269 Sep 02 00:47:05.621 INFO kablam! at libstd/panicking.rs:477 Sep 02 00:47:05.621 INFO kablam! 5: 0x55574cc77fc9 - std::panicking::continue_panic_fmt::h80f959dff5011bfa Sep 02 00:47:05.621 INFO kablam! at libstd/panicking.rs:391 Sep 02 00:47:05.621 INFO kablam! 6: 0x55574cc77f2d - std::panicking::begin_panic_fmt::h1c504546adbc2178 Sep 02 00:47:05.621 INFO kablam! at libstd/panicking.rs:346 Sep 02 00:47:05.621 INFO kablam! 7: 0x55574cc15da1 - cmake::fail::hdf66fb2d2daf2feb Sep 02 00:47:05.621 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 02 00:47:05.621 INFO kablam! 8: 0x55574cc156e0 - cmake::run::h39d60cf4ac6f78ff Sep 02 00:47:05.621 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 02 00:47:05.621 INFO kablam! 9: 0x55574cc1126e - cmake::Config::build::h410a69f6f446fc42 Sep 02 00:47:05.621 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 02 00:47:05.621 INFO kablam! 10: 0x55574cc0cc75 - build_script_build::main::hb71a341ca0fdda9c Sep 02 00:47:05.621 INFO kablam! at /source/build.rs:18 Sep 02 00:47:05.621 INFO kablam! 11: 0x55574cc0e0bf - std::rt::lang_start::{{closure}}::h72ab364efc83538f Sep 02 00:47:05.621 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 02 00:47:05.621 INFO kablam! 12: 0x55574cc77e62 - std::panicking::try::do_call::h09be9541d3992dd3 Sep 02 00:47:05.621 INFO kablam! at libstd/rt.rs:59 Sep 02 00:47:05.621 INFO kablam! at libstd/panicking.rs:310 Sep 02 00:47:05.621 INFO kablam! 13: 0x55574cc9b3c9 - __rust_maybe_catch_panic Sep 02 00:47:05.621 INFO kablam! at libpanic_unwind/lib.rs:103 Sep 02 00:47:05.622 INFO kablam! 14: 0x55574cc845a5 - std::rt::lang_start_internal::h395b9eb1beda0e43 Sep 02 00:47:05.622 INFO kablam! at libstd/panicking.rs:289 Sep 02 00:47:05.622 INFO kablam! at libstd/panic.rs:392 Sep 02 00:47:05.622 INFO kablam! at libstd/rt.rs:58 Sep 02 00:47:05.622 INFO kablam! 15: 0x55574cc0e097 - std::rt::lang_start::ha357e68451a5969b Sep 02 00:47:05.622 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 02 00:47:05.622 INFO kablam! 16: 0x55574cc0d5b9 - main Sep 02 00:47:05.622 INFO kablam! 17: 0x7fb60178782f - __libc_start_main Sep 02 00:47:05.622 INFO kablam! 18: 0x55574cc0c9d8 - _start Sep 02 00:47:05.622 INFO kablam! 19: 0x0 - Sep 02 00:47:05.622 INFO kablam! Sep 02 00:47:05.622 INFO kablam! su: No module specific data is present Sep 02 00:47:06.092 INFO running `"docker" "rm" "-f" "b310a29d2adf71fd9bbb2951a25938b5448bb9de394293d0a4c1c01720ebed0f"` Sep 02 00:47:06.178 INFO blam! b310a29d2adf71fd9bbb2951a25938b5448bb9de394293d0a4c1c01720ebed0f