Aug 30 22:02:30.257 INFO checking chemfiles-sys-0.5.0 against try#2d477f9981361618ac78253c28051a66b6cea125 for pr-53707 Aug 30 22:02:30.257 INFO running: cargo +2d477f9981361618ac78253c28051a66b6cea125-alt check --frozen --all --all-targets Aug 30 22:02:30.257 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-1/pr-53707/try#2d477f9981361618ac78253c28051a66b6cea125:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53707/worker-1/try#2d477f9981361618ac78253c28051a66b6cea125:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +2d477f9981361618ac78253c28051a66b6cea125-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Aug 30 22:02:30.422 INFO blam! 938e0356394c658a47c9590cd1ece81780ac3e2630f726feed4ac79add4bdd4d Aug 30 22:02:30.424 INFO running `"docker" "start" "-a" "938e0356394c658a47c9590cd1ece81780ac3e2630f726feed4ac79add4bdd4d"` Aug 30 22:02:31.173 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Aug 30 22:02:35.910 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Aug 30 22:02:35.910 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-3015bd0663c1a262/build-script-build` (exit code: 101) Aug 30 22:02:35.910 INFO kablam! --- stdout Aug 30 22:02:35.910 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-3a4cf4ca5b33bcf9/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Aug 30 22:02:35.910 INFO kablam! -- The C compiler identification is GNU 5.4.0 Aug 30 22:02:35.910 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Aug 30 22:02:35.910 INFO kablam! -- Check for working C compiler: /usr/bin/cc Aug 30 22:02:35.910 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Aug 30 22:02:35.910 INFO kablam! -- Detecting C compiler ABI info Aug 30 22:02:35.910 INFO kablam! -- Detecting C compiler ABI info - done Aug 30 22:02:35.910 INFO kablam! -- Detecting C compile features Aug 30 22:02:35.910 INFO kablam! -- Detecting C compile features - done Aug 30 22:02:35.910 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Aug 30 22:02:35.910 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Aug 30 22:02:35.910 INFO kablam! -- Detecting CXX compiler ABI info Aug 30 22:02:35.910 INFO kablam! -- Detecting CXX compiler ABI info - done Aug 30 22:02:35.910 INFO kablam! -- Detecting CXX compile features Aug 30 22:02:35.910 INFO kablam! -- Detecting CXX compile features - done Aug 30 22:02:35.910 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Aug 30 22:02:35.910 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Aug 30 22:02:35.910 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Aug 30 22:02:35.910 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Aug 30 22:02:35.911 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Aug 30 22:02:35.911 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Aug 30 22:02:35.912 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Aug 30 22:02:35.912 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Aug 30 22:02:35.912 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Aug 30 22:02:35.912 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Aug 30 22:02:35.912 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Aug 30 22:02:35.912 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Aug 30 22:02:35.912 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Aug 30 22:02:35.912 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Aug 30 22:02:35.912 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Aug 30 22:02:35.912 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Aug 30 22:02:35.912 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Aug 30 22:02:35.913 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Aug 30 22:02:35.913 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Aug 30 22:02:35.913 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Aug 30 22:02:35.913 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Aug 30 22:02:35.913 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Aug 30 22:02:35.913 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Aug 30 22:02:35.913 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Aug 30 22:02:35.913 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Aug 30 22:02:35.913 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Aug 30 22:02:35.913 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Aug 30 22:02:35.913 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Aug 30 22:02:35.913 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Aug 30 22:02:35.914 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Aug 30 22:02:35.914 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Aug 30 22:02:35.914 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Aug 30 22:02:35.914 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Aug 30 22:02:35.914 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Aug 30 22:02:35.914 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Aug 30 22:02:35.914 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Aug 30 22:02:35.914 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Aug 30 22:02:35.914 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Aug 30 22:02:35.914 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Aug 30 22:02:35.914 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Aug 30 22:02:35.914 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Aug 30 22:02:35.914 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Aug 30 22:02:35.915 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Aug 30 22:02:35.915 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Aug 30 22:02:35.915 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Aug 30 22:02:35.915 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Aug 30 22:02:35.915 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Aug 30 22:02:35.915 INFO kablam! -- Configuring incomplete, errors occurred! Aug 30 22:02:35.915 INFO kablam! See also "/target/debug/build/chemfiles-sys-3a4cf4ca5b33bcf9/out/build/CMakeFiles/CMakeOutput.log". Aug 30 22:02:35.915 INFO kablam! See also "/target/debug/build/chemfiles-sys-3a4cf4ca5b33bcf9/out/build/CMakeFiles/CMakeError.log". Aug 30 22:02:35.915 INFO kablam! Aug 30 22:02:35.915 INFO kablam! --- stderr Aug 30 22:02:35.915 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Aug 30 22:02:35.915 INFO kablam! CMake Error: : System Error: Read-only file system Aug 30 22:02:35.916 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Aug 30 22:02:35.916 INFO kablam! configure_file Problem configuring file Aug 30 22:02:35.916 INFO kablam! Call Stack (most recent call first): Aug 30 22:02:35.916 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Aug 30 22:02:35.916 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Aug 30 22:02:35.916 INFO kablam! Aug 30 22:02:35.916 INFO kablam! Aug 30 22:02:35.917 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Aug 30 22:02:35.917 INFO kablam! CMake Error: : System Error: Read-only file system Aug 30 22:02:35.917 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Aug 30 22:02:35.917 INFO kablam! configure_file Problem configuring file Aug 30 22:02:35.917 INFO kablam! Aug 30 22:02:35.917 INFO kablam! Aug 30 22:02:35.917 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Aug 30 22:02:35.917 INFO kablam! No cmake_minimum_required command is present. A line of code such as Aug 30 22:02:35.917 INFO kablam! Aug 30 22:02:35.917 INFO kablam! cmake_minimum_required(VERSION 3.5) Aug 30 22:02:35.918 INFO kablam! Aug 30 22:02:35.918 INFO kablam! should be added at the top of the file. The version specified may be lower Aug 30 22:02:35.919 INFO kablam! if you wish to support older CMake versions for this project. For more Aug 30 22:02:35.919 INFO kablam! information run "cmake --help-policy CMP0000". Aug 30 22:02:35.919 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Aug 30 22:02:35.919 INFO kablam! Aug 30 22:02:35.920 INFO kablam! thread 'main' panicked at ' Aug 30 22:02:35.920 INFO kablam! command did not execute successfully, got: exit code: 1 Aug 30 22:02:35.920 INFO kablam! Aug 30 22:02:35.920 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Aug 30 22:02:35.920 INFO kablam! stack backtrace: Aug 30 22:02:35.921 INFO kablam! 0: 0x555644bbc75e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h8f71f310d118facb Aug 30 22:02:35.921 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Aug 30 22:02:35.921 INFO kablam! 1: 0x555644bac3b6 - std::sys_common::backtrace::print::hfdcfd1f104fe4840 Aug 30 22:02:35.921 INFO kablam! at libstd/sys_common/backtrace.rs:71 Aug 30 22:02:35.921 INFO kablam! at libstd/sys_common/backtrace.rs:59 Aug 30 22:02:35.921 INFO kablam! 2: 0x555644baac7d - std::panicking::default_hook::{{closure}}::heac6c2569094f14c Aug 30 22:02:35.921 INFO kablam! at libstd/panicking.rs:211 Aug 30 22:02:35.921 INFO kablam! 3: 0x555644baa9f0 - std::panicking::default_hook::h172730ec656eb3f4 Aug 30 22:02:35.921 INFO kablam! at libstd/panicking.rs:227 Aug 30 22:02:35.921 INFO kablam! 4: 0x555644bab28c - std::panicking::rust_panic_with_hook::h4baee0ff6b4c8d5f Aug 30 22:02:35.921 INFO kablam! at libstd/panicking.rs:477 Aug 30 22:02:35.921 INFO kablam! 5: 0x555644baae89 - std::panicking::continue_panic_fmt::he85e6162abe63ff8 Aug 30 22:02:35.921 INFO kablam! at libstd/panicking.rs:391 Aug 30 22:02:35.922 INFO kablam! 6: 0x555644baaded - std::panicking::begin_panic_fmt::h75293e919fd296a2 Aug 30 22:02:35.922 INFO kablam! at libstd/panicking.rs:346 Aug 30 22:02:35.922 INFO kablam! 7: 0x555644b48da1 - cmake::fail::h09d9865fa7de537b Aug 30 22:02:35.922 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Aug 30 22:02:35.922 INFO kablam! 8: 0x555644b486e0 - cmake::run::hd26ae279463f7374 Aug 30 22:02:35.922 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Aug 30 22:02:35.922 INFO kablam! 9: 0x555644b4426e - cmake::Config::build::h17c7f4f009ac6820 Aug 30 22:02:35.922 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Aug 30 22:02:35.922 INFO kablam! 10: 0x555644b402c5 - build_script_build::main::h6c7d38f13b81a946 Aug 30 22:02:35.922 INFO kablam! at /source/build.rs:18 Aug 30 22:02:35.922 INFO kablam! 11: 0x555644b40c8f - std::rt::lang_start::{{closure}}::h6fd72244a2f9fe79 Aug 30 22:02:35.922 INFO kablam! at /checkout/src/libstd/rt.rs:74 Aug 30 22:02:35.922 INFO kablam! 12: 0x555644baad22 - std::panicking::try::do_call::h09d1819b0274af73 Aug 30 22:02:35.922 INFO kablam! at libstd/rt.rs:59 Aug 30 22:02:35.922 INFO kablam! at libstd/panicking.rs:310 Aug 30 22:02:35.922 INFO kablam! 13: 0x555644bce829 - __rust_maybe_catch_panic Aug 30 22:02:35.922 INFO kablam! at libpanic_unwind/lib.rs:102 Aug 30 22:02:35.922 INFO kablam! 14: 0x555644bb7475 - std::rt::lang_start_internal::hf36d29744825ff5e Aug 30 22:02:35.922 INFO kablam! at libstd/panicking.rs:289 Aug 30 22:02:35.922 INFO kablam! at libstd/panic.rs:392 Aug 30 22:02:35.923 INFO kablam! at libstd/rt.rs:58 Aug 30 22:02:35.923 INFO kablam! 15: 0x555644b40c67 - std::rt::lang_start::hc4eccbbf0c0887ec Aug 30 22:02:35.923 INFO kablam! at /checkout/src/libstd/rt.rs:74 Aug 30 22:02:35.923 INFO kablam! 16: 0x555644b40c09 - main Aug 30 22:02:35.923 INFO kablam! 17: 0x7f95cedb482f - __libc_start_main Aug 30 22:02:35.923 INFO kablam! 18: 0x555644b3f9d8 - _start Aug 30 22:02:35.923 INFO kablam! 19: 0x0 - Aug 30 22:02:35.923 INFO kablam! Aug 30 22:02:35.923 INFO kablam! su: No module specific data is present Aug 30 22:02:36.509 INFO running `"docker" "rm" "-f" "938e0356394c658a47c9590cd1ece81780ac3e2630f726feed4ac79add4bdd4d"` Aug 30 22:02:36.594 INFO blam! 938e0356394c658a47c9590cd1ece81780ac3e2630f726feed4ac79add4bdd4d