Sep 01 01:10:37.165 INFO checking heme-0.3.1 against master#d0d81b7fc1421859ba0218e8a437af29ae3b0967 for pr-53578
Sep 01 01:10:37.165 INFO running: cargo +d0d81b7fc1421859ba0218e8a437af29ae3b0967-alt check --frozen --all --all-targets
Sep 01 01:10:37.166 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-2/pr-53578/master#d0d81b7fc1421859ba0218e8a437af29ae3b0967:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53578/worker-2/master#d0d81b7fc1421859ba0218e8a437af29ae3b0967:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +d0d81b7fc1421859ba0218e8a437af29ae3b0967-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"`
Sep 01 01:10:37.370 INFO blam! cc0b2491129f44c64358f66d269c004b951abaa3dd2a57eaf768bf5ef64b099f
Sep 01 01:10:37.372 INFO running `"docker" "start" "-a" "cc0b2491129f44c64358f66d269c004b951abaa3dd2a57eaf768bf5ef64b099f"`
Sep 01 01:10:38.046 INFO kablam!     Checking heme v0.3.1 (file:///source)
Sep 01 01:10:38.675 INFO kablam! warning: unused import: `std::collections::HashMap`
Sep 01 01:10:38.675 INFO kablam!  --> src/sampling.rs:1:5
Sep 01 01:10:38.675 INFO kablam!   |
Sep 01 01:10:38.675 INFO kablam! 1 | use std::collections::HashMap; 
Sep 01 01:10:38.675 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Sep 01 01:10:38.675 INFO kablam!   |
Sep 01 01:10:38.675 INFO kablam!   = note: #[warn(unused_imports)] on by default
Sep 01 01:10:38.675 INFO kablam! 
Sep 01 01:10:38.813 INFO kablam! warning: unused import: `std::collections::HashMap`
Sep 01 01:10:38.813 INFO kablam!  --> src/sampling.rs:1:5
Sep 01 01:10:38.813 INFO kablam!   |
Sep 01 01:10:38.813 INFO kablam! 1 | use std::collections::HashMap; 
Sep 01 01:10:38.813 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Sep 01 01:10:38.814 INFO kablam!   |
Sep 01 01:10:38.814 INFO kablam!   = note: #[warn(unused_imports)] on by default
Sep 01 01:10:38.815 INFO kablam! 
Sep 01 01:10:38.850 INFO kablam! warning: unused variable: `protocol_name`
Sep 01 01:10:38.850 INFO kablam!   --> src/sampling.rs:20:21
Sep 01 01:10:38.850 INFO kablam!    |
Sep 01 01:10:38.850 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Sep 01 01:10:38.850 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Sep 01 01:10:38.851 INFO kablam!    |
Sep 01 01:10:38.851 INFO kablam!    = note: #[warn(unused_variables)] on by default
Sep 01 01:10:38.851 INFO kablam! 
Sep 01 01:10:38.851 INFO kablam! warning: unused variable: `a1`
Sep 01 01:10:38.851 INFO kablam!   --> src/scoring.rs:24:39
Sep 01 01:10:38.851 INFO kablam!    |
Sep 01 01:10:38.851 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 01 01:10:38.851 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Sep 01 01:10:38.851 INFO kablam! 
Sep 01 01:10:38.851 INFO kablam! warning: unused variable: `a2`
Sep 01 01:10:38.851 INFO kablam!   --> src/scoring.rs:24:50
Sep 01 01:10:38.851 INFO kablam!    |
Sep 01 01:10:38.851 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 01 01:10:38.851 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Sep 01 01:10:38.851 INFO kablam! 
Sep 01 01:10:38.880 INFO kablam! warning: field is never used: `atoms`
Sep 01 01:10:38.880 INFO kablam!   --> src/conformation.rs:52:5
Sep 01 01:10:38.880 INFO kablam!    |
Sep 01 01:10:38.880 INFO kablam! 52 |     atoms: Vec<Atom>,
Sep 01 01:10:38.880 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Sep 01 01:10:38.880 INFO kablam!    |
Sep 01 01:10:38.880 INFO kablam!    = note: #[warn(dead_code)] on by default
Sep 01 01:10:38.880 INFO kablam! 
Sep 01 01:10:38.880 INFO kablam! warning: field is never used: `residue_name`
Sep 01 01:10:38.881 INFO kablam!   --> src/conformation.rs:53:5
Sep 01 01:10:38.881 INFO kablam!    |
Sep 01 01:10:38.881 INFO kablam! 53 |     residue_name: String,
Sep 01 01:10:38.881 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Sep 01 01:10:38.881 INFO kablam! 
Sep 01 01:10:38.881 INFO kablam! warning: field is never used: `residue_index`
Sep 01 01:10:38.881 INFO kablam!   --> src/conformation.rs:54:5
Sep 01 01:10:38.881 INFO kablam!    |
Sep 01 01:10:38.881 INFO kablam! 54 |     residue_index: i32,
Sep 01 01:10:38.881 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Sep 01 01:10:38.881 INFO kablam! 
Sep 01 01:10:39.026 INFO kablam! warning: unused variable: `protocol_name`
Sep 01 01:10:39.026 INFO kablam!   --> src/sampling.rs:20:21
Sep 01 01:10:39.026 INFO kablam!    |
Sep 01 01:10:39.026 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Sep 01 01:10:39.026 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Sep 01 01:10:39.027 INFO kablam!    |
Sep 01 01:10:39.027 INFO kablam!    = note: #[warn(unused_variables)] on by default
Sep 01 01:10:39.028 INFO kablam! 
Sep 01 01:10:39.028 INFO kablam! warning: unused variable: `a1`
Sep 01 01:10:39.028 INFO kablam!   --> src/scoring.rs:24:39
Sep 01 01:10:39.028 INFO kablam!    |
Sep 01 01:10:39.028 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 01 01:10:39.028 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Sep 01 01:10:39.029 INFO kablam! 
Sep 01 01:10:39.029 INFO kablam! warning: unused variable: `a2`
Sep 01 01:10:39.029 INFO kablam!   --> src/scoring.rs:24:50
Sep 01 01:10:39.029 INFO kablam!    |
Sep 01 01:10:39.029 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Sep 01 01:10:39.029 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Sep 01 01:10:39.030 INFO kablam! 
Sep 01 01:10:39.074 INFO kablam! warning: field is never used: `atoms`
Sep 01 01:10:39.074 INFO kablam!   --> src/conformation.rs:52:5
Sep 01 01:10:39.074 INFO kablam!    |
Sep 01 01:10:39.074 INFO kablam! 52 |     atoms: Vec<Atom>,
Sep 01 01:10:39.074 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Sep 01 01:10:39.075 INFO kablam!    |
Sep 01 01:10:39.075 INFO kablam!    = note: #[warn(dead_code)] on by default
Sep 01 01:10:39.076 INFO kablam! 
Sep 01 01:10:39.076 INFO kablam! warning: field is never used: `residue_name`
Sep 01 01:10:39.076 INFO kablam!   --> src/conformation.rs:53:5
Sep 01 01:10:39.076 INFO kablam!    |
Sep 01 01:10:39.076 INFO kablam! 53 |     residue_name: String,
Sep 01 01:10:39.076 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Sep 01 01:10:39.077 INFO kablam! 
Sep 01 01:10:39.077 INFO kablam! warning: field is never used: `residue_index`
Sep 01 01:10:39.077 INFO kablam!   --> src/conformation.rs:54:5
Sep 01 01:10:39.077 INFO kablam!    |
Sep 01 01:10:39.077 INFO kablam! 54 |     residue_index: i32,
Sep 01 01:10:39.077 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Sep 01 01:10:39.078 INFO kablam! 
Sep 01 01:10:39.083 INFO kablam! warning: function `H` should have a snake case name such as `h`
Sep 01 01:10:39.083 INFO kablam!    --> src/io.rs:152:9
Sep 01 01:10:39.083 INFO kablam!     |
Sep 01 01:10:39.083 INFO kablam! 152 | /         fn H(l: &f64) -> f64 {
Sep 01 01:10:39.083 INFO kablam! 153 | |
Sep 01 01:10:39.083 INFO kablam! 154 | |             // bounds of N choose lN
Sep 01 01:10:39.083 INFO kablam! 155 | |             // can be found by 2^(n*H(l))
Sep 01 01:10:39.083 INFO kablam! ...   |
Sep 01 01:10:39.083 INFO kablam! 161 | |             l.ln() - value * value.ln()
Sep 01 01:10:39.083 INFO kablam! 162 | |         }
Sep 01 01:10:39.083 INFO kablam!     | |_________^
Sep 01 01:10:39.084 INFO kablam!     |
Sep 01 01:10:39.084 INFO kablam!     = note: #[warn(non_snake_case)] on by default
Sep 01 01:10:39.085 INFO kablam! 
Sep 01 01:10:39.955 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 1.92s
Sep 01 01:10:39.966 INFO kablam! su: No module specific data is present
Sep 01 01:10:40.520 INFO running `"docker" "rm" "-f" "cc0b2491129f44c64358f66d269c004b951abaa3dd2a57eaf768bf5ef64b099f"`
Sep 01 01:10:40.718 INFO blam! cc0b2491129f44c64358f66d269c004b951abaa3dd2a57eaf768bf5ef64b099f