Sep 01 08:14:14.504 INFO checking chemfiles-sys-0.5.0 against master#d0d81b7fc1421859ba0218e8a437af29ae3b0967 for pr-53578 Sep 01 08:14:14.504 INFO running: cargo +d0d81b7fc1421859ba0218e8a437af29ae3b0967-alt check --frozen --all --all-targets Sep 01 08:14:14.504 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-0/pr-53578/master#d0d81b7fc1421859ba0218e8a437af29ae3b0967:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53578/worker-0/master#d0d81b7fc1421859ba0218e8a437af29ae3b0967:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +d0d81b7fc1421859ba0218e8a437af29ae3b0967-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Sep 01 08:14:14.662 INFO blam! 03bdaf26b32304ac0e5ee49fd3cf77cb9c7544a0f1465e16a5ee7a284044784b Sep 01 08:14:14.663 INFO running `"docker" "start" "-a" "03bdaf26b32304ac0e5ee49fd3cf77cb9c7544a0f1465e16a5ee7a284044784b"` Sep 01 08:14:15.315 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 01 08:14:20.810 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 01 08:14:20.810 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-56b9dbfed6a333bf/build-script-build` (exit code: 101) Sep 01 08:14:20.810 INFO kablam! --- stdout Sep 01 08:14:20.810 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-3105160e8f367aec/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 01 08:14:20.810 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 01 08:14:20.810 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 01 08:14:20.810 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 01 08:14:20.810 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 01 08:14:20.810 INFO kablam! -- Detecting C compiler ABI info Sep 01 08:14:20.810 INFO kablam! -- Detecting C compiler ABI info - done Sep 01 08:14:20.810 INFO kablam! -- Detecting C compile features Sep 01 08:14:20.810 INFO kablam! -- Detecting C compile features - done Sep 01 08:14:20.811 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 01 08:14:20.811 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 01 08:14:20.811 INFO kablam! -- Detecting CXX compiler ABI info Sep 01 08:14:20.811 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 01 08:14:20.811 INFO kablam! -- Detecting CXX compile features Sep 01 08:14:20.811 INFO kablam! -- Detecting CXX compile features - done Sep 01 08:14:20.811 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 01 08:14:20.811 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 01 08:14:20.811 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 01 08:14:20.811 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 01 08:14:20.811 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 01 08:14:20.811 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 01 08:14:20.811 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 01 08:14:20.811 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 01 08:14:20.811 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 01 08:14:20.811 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 01 08:14:20.811 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 01 08:14:20.811 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 01 08:14:20.811 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 01 08:14:20.812 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 01 08:14:20.812 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 01 08:14:20.813 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 01 08:14:20.813 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 01 08:14:20.813 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 01 08:14:20.813 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 01 08:14:20.813 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 01 08:14:20.813 INFO kablam! -- Configuring incomplete, errors occurred! Sep 01 08:14:20.813 INFO kablam! See also "/target/debug/build/chemfiles-sys-3105160e8f367aec/out/build/CMakeFiles/CMakeOutput.log". Sep 01 08:14:20.813 INFO kablam! See also "/target/debug/build/chemfiles-sys-3105160e8f367aec/out/build/CMakeFiles/CMakeError.log". Sep 01 08:14:20.813 INFO kablam! Sep 01 08:14:20.813 INFO kablam! --- stderr Sep 01 08:14:20.813 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 01 08:14:20.813 INFO kablam! CMake Error: : System Error: Read-only file system Sep 01 08:14:20.813 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 01 08:14:20.814 INFO kablam! configure_file Problem configuring file Sep 01 08:14:20.814 INFO kablam! Call Stack (most recent call first): Sep 01 08:14:20.814 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 01 08:14:20.814 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 01 08:14:20.814 INFO kablam! CMake Error: : System Error: Read-only file system Sep 01 08:14:20.814 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 01 08:14:20.814 INFO kablam! configure_file Problem configuring file Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 01 08:14:20.814 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 01 08:14:20.814 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 01 08:14:20.814 INFO kablam! information run "cmake --help-policy CMP0000". Sep 01 08:14:20.814 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! thread 'main' panicked at ' Sep 01 08:14:20.814 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 01 08:14:20.814 INFO kablam! Sep 01 08:14:20.814 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 01 08:14:20.814 INFO kablam! stack backtrace: Sep 01 08:14:20.814 INFO kablam! 0: 0x55a9673558be - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h8c3d0a2d42413513 Sep 01 08:14:20.814 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 01 08:14:20.814 INFO kablam! 1: 0x55a967345506 - std::sys_common::backtrace::print::h2501b31339c3d559 Sep 01 08:14:20.814 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 01 08:14:20.814 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 01 08:14:20.814 INFO kablam! 2: 0x55a967343dcd - std::panicking::default_hook::{{closure}}::h9550b067844d79de Sep 01 08:14:20.815 INFO kablam! at libstd/panicking.rs:211 Sep 01 08:14:20.815 INFO kablam! 3: 0x55a967343b40 - std::panicking::default_hook::h26bd688683b20acb Sep 01 08:14:20.815 INFO kablam! at libstd/panicking.rs:227 Sep 01 08:14:20.815 INFO kablam! 4: 0x55a9673443dc - std::panicking::rust_panic_with_hook::h0967a90ee06b4501 Sep 01 08:14:20.815 INFO kablam! at libstd/panicking.rs:475 Sep 01 08:14:20.815 INFO kablam! 5: 0x55a967343fd9 - std::panicking::continue_panic_fmt::h2246084f996cae26 Sep 01 08:14:20.815 INFO kablam! at libstd/panicking.rs:390 Sep 01 08:14:20.815 INFO kablam! 6: 0x55a967343f3d - std::panicking::begin_panic_fmt::h94668429cb9b1695 Sep 01 08:14:20.815 INFO kablam! at libstd/panicking.rs:345 Sep 01 08:14:20.815 INFO kablam! 7: 0x55a9672e1da1 - cmake::fail::h3688231cbf8bfa89 Sep 01 08:14:20.815 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 01 08:14:20.815 INFO kablam! 8: 0x55a9672e16e0 - cmake::run::h96f6e13a9cf518d0 Sep 01 08:14:20.815 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 01 08:14:20.815 INFO kablam! 9: 0x55a9672dd26e - cmake::Config::build::h14dc97235dcd5100 Sep 01 08:14:20.815 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 01 08:14:20.815 INFO kablam! 10: 0x55a9672d8d85 - build_script_build::main::hd6156820ab4e915f Sep 01 08:14:20.815 INFO kablam! at /source/build.rs:18 Sep 01 08:14:20.815 INFO kablam! 11: 0x55a9672d8bcf - std::rt::lang_start::{{closure}}::h10c3b809984adb5f Sep 01 08:14:20.815 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 01 08:14:20.815 INFO kablam! 12: 0x55a967343e72 - std::panicking::try::do_call::hc4206115bb2011fe Sep 01 08:14:20.815 INFO kablam! at libstd/rt.rs:59 Sep 01 08:14:20.815 INFO kablam! at libstd/panicking.rs:310 Sep 01 08:14:20.815 INFO kablam! 13: 0x55a9673673e9 - __rust_maybe_catch_panic Sep 01 08:14:20.815 INFO kablam! at libpanic_unwind/lib.rs:102 Sep 01 08:14:20.815 INFO kablam! 14: 0x55a9673505c5 - std::rt::lang_start_internal::h0f4e93d8d2604488 Sep 01 08:14:20.815 INFO kablam! at libstd/panicking.rs:289 Sep 01 08:14:20.815 INFO kablam! at libstd/panic.rs:392 Sep 01 08:14:20.815 INFO kablam! at libstd/rt.rs:58 Sep 01 08:14:20.815 INFO kablam! 15: 0x55a9672d8ba7 - std::rt::lang_start::hc59250152472f46c Sep 01 08:14:20.815 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 01 08:14:20.815 INFO kablam! 16: 0x55a9672d96c9 - main Sep 01 08:14:20.815 INFO kablam! 17: 0x7f3a2232c82f - __libc_start_main Sep 01 08:14:20.815 INFO kablam! 18: 0x55a9672d89d8 - _start Sep 01 08:14:20.815 INFO kablam! 19: 0x0 - Sep 01 08:14:20.815 INFO kablam! Sep 01 08:14:20.815 INFO kablam! su: No module specific data is present Sep 01 08:14:21.145 INFO running `"docker" "rm" "-f" "03bdaf26b32304ac0e5ee49fd3cf77cb9c7544a0f1465e16a5ee7a284044784b"` Sep 01 08:14:21.239 INFO blam! 03bdaf26b32304ac0e5ee49fd3cf77cb9c7544a0f1465e16a5ee7a284044784b