Sep 14 18:31:29.123 INFO checking chemfiles-sys-0.5.0 against try#87b8e7411c4f1267d0cac0d63fa9c21c943e2ea0 for pr-53578-1 Sep 14 18:31:29.123 INFO running: cargo +87b8e7411c4f1267d0cac0d63fa9c21c943e2ea0-alt check --frozen --all --all-targets Sep 14 18:31:29.123 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-4/pr-53578-1/try#87b8e7411c4f1267d0cac0d63fa9c21c943e2ea0:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53578-1/worker-4/try#87b8e7411c4f1267d0cac0d63fa9c21c943e2ea0:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +87b8e7411c4f1267d0cac0d63fa9c21c943e2ea0-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "2G" "crater"` Sep 14 18:31:29.288 INFO blam! 99db8c23a1c087ffae27bc341333ef7a41a6d4ecd82bcf0094a2444c0bb9f37a Sep 14 18:31:29.291 INFO running `"docker" "start" "-a" "99db8c23a1c087ffae27bc341333ef7a41a6d4ecd82bcf0094a2444c0bb9f37a"` Sep 14 18:31:30.099 INFO kablam! usermod: no changes Sep 14 18:31:30.132 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Sep 14 18:31:36.167 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Sep 14 18:31:36.167 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-fa52f38888ac6c68/build-script-build` (exit code: 101) Sep 14 18:31:36.167 INFO kablam! --- stdout Sep 14 18:31:36.167 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-11fa8ed72e4d2f5d/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Sep 14 18:31:36.167 INFO kablam! -- The C compiler identification is GNU 5.4.0 Sep 14 18:31:36.167 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Sep 14 18:31:36.167 INFO kablam! -- Check for working C compiler: /usr/bin/cc Sep 14 18:31:36.167 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Sep 14 18:31:36.167 INFO kablam! -- Detecting C compiler ABI info Sep 14 18:31:36.167 INFO kablam! -- Detecting C compiler ABI info - done Sep 14 18:31:36.167 INFO kablam! -- Detecting C compile features Sep 14 18:31:36.167 INFO kablam! -- Detecting C compile features - done Sep 14 18:31:36.167 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Sep 14 18:31:36.167 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Sep 14 18:31:36.167 INFO kablam! -- Detecting CXX compiler ABI info Sep 14 18:31:36.167 INFO kablam! -- Detecting CXX compiler ABI info - done Sep 14 18:31:36.167 INFO kablam! -- Detecting CXX compile features Sep 14 18:31:36.167 INFO kablam! -- Detecting CXX compile features - done Sep 14 18:31:36.167 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Sep 14 18:31:36.167 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Sep 14 18:31:36.168 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Sep 14 18:31:36.168 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Sep 14 18:31:36.168 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Sep 14 18:31:36.168 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Sep 14 18:31:36.168 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Sep 14 18:31:36.169 INFO kablam! -- Configuring incomplete, errors occurred! Sep 14 18:31:36.169 INFO kablam! See also "/target/debug/build/chemfiles-sys-11fa8ed72e4d2f5d/out/build/CMakeFiles/CMakeOutput.log". Sep 14 18:31:36.169 INFO kablam! See also "/target/debug/build/chemfiles-sys-11fa8ed72e4d2f5d/out/build/CMakeFiles/CMakeError.log". Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! --- stderr Sep 14 18:31:36.169 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Sep 14 18:31:36.169 INFO kablam! CMake Error: : System Error: Read-only file system Sep 14 18:31:36.169 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Sep 14 18:31:36.169 INFO kablam! configure_file Problem configuring file Sep 14 18:31:36.169 INFO kablam! Call Stack (most recent call first): Sep 14 18:31:36.169 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Sep 14 18:31:36.169 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Sep 14 18:31:36.169 INFO kablam! CMake Error: : System Error: Read-only file system Sep 14 18:31:36.169 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Sep 14 18:31:36.169 INFO kablam! configure_file Problem configuring file Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Sep 14 18:31:36.169 INFO kablam! No cmake_minimum_required command is present. A line of code such as Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! cmake_minimum_required(VERSION 3.5) Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! should be added at the top of the file. The version specified may be lower Sep 14 18:31:36.169 INFO kablam! if you wish to support older CMake versions for this project. For more Sep 14 18:31:36.169 INFO kablam! information run "cmake --help-policy CMP0000". Sep 14 18:31:36.169 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! thread 'main' panicked at ' Sep 14 18:31:36.169 INFO kablam! command did not execute successfully, got: exit code: 1 Sep 14 18:31:36.169 INFO kablam! Sep 14 18:31:36.169 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Sep 14 18:31:36.169 INFO kablam! stack backtrace: Sep 14 18:31:36.169 INFO kablam! 0: 0x562d5c4f245e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h41c993454ce21d81 Sep 14 18:31:36.169 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Sep 14 18:31:36.169 INFO kablam! 1: 0x562d5c4e20b6 - std::sys_common::backtrace::print::h589927f912fef2ff Sep 14 18:31:36.169 INFO kablam! at libstd/sys_common/backtrace.rs:71 Sep 14 18:31:36.169 INFO kablam! at libstd/sys_common/backtrace.rs:59 Sep 14 18:31:36.169 INFO kablam! 2: 0x562d5c4e09bd - std::panicking::default_hook::{{closure}}::h9291452627a7ea3e Sep 14 18:31:36.169 INFO kablam! at libstd/panicking.rs:211 Sep 14 18:31:36.170 INFO kablam! 3: 0x562d5c4e0730 - std::panicking::default_hook::h6c8627623d33d292 Sep 14 18:31:36.170 INFO kablam! at libstd/panicking.rs:227 Sep 14 18:31:36.170 INFO kablam! 4: 0x562d5c4e0fcc - std::panicking::rust_panic_with_hook::he648562e376b33df Sep 14 18:31:36.170 INFO kablam! at libstd/panicking.rs:477 Sep 14 18:31:36.170 INFO kablam! 5: 0x562d5c4e0bc9 - std::panicking::continue_panic_fmt::h3d208fe7124551fd Sep 14 18:31:36.170 INFO kablam! at libstd/panicking.rs:391 Sep 14 18:31:36.170 INFO kablam! 6: 0x562d5c4e0b2d - std::panicking::begin_panic_fmt::h549ad084f131a477 Sep 14 18:31:36.170 INFO kablam! at libstd/panicking.rs:346 Sep 14 18:31:36.170 INFO kablam! 7: 0x562d5c476c61 - cmake::fail::hdf166e85af5ef715 Sep 14 18:31:36.171 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Sep 14 18:31:36.171 INFO kablam! 8: 0x562d5c47659a - cmake::run::h180c6f555b9112f7 Sep 14 18:31:36.171 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Sep 14 18:31:36.171 INFO kablam! 9: 0x562d5c47217e - cmake::Config::build::h34cbb074d16b9787 Sep 14 18:31:36.171 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Sep 14 18:31:36.171 INFO kablam! 10: 0x562d5c46ee69 - build_script_build::main::h354fda0ba83f4b20 Sep 14 18:31:36.171 INFO kablam! at /source/build.rs:18 Sep 14 18:31:36.171 INFO kablam! 11: 0x562d5c46fbbf - std::rt::lang_start::{{closure}}::hae8525ed0e408fa7 Sep 14 18:31:36.171 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 14 18:31:36.171 INFO kablam! 12: 0x562d5c4e0a62 - std::panicking::try::do_call::h0a45ab634c47bf28 Sep 14 18:31:36.171 INFO kablam! at libstd/rt.rs:59 Sep 14 18:31:36.171 INFO kablam! at libstd/panicking.rs:310 Sep 14 18:31:36.171 INFO kablam! 13: 0x562d5c504a69 - __rust_maybe_catch_panic Sep 14 18:31:36.171 INFO kablam! at libpanic_unwind/lib.rs:102 Sep 14 18:31:36.171 INFO kablam! 14: 0x562d5c4ed1e5 - std::rt::lang_start_internal::he2cc69ced118af39 Sep 14 18:31:36.171 INFO kablam! at libstd/panicking.rs:289 Sep 14 18:31:36.171 INFO kablam! at libstd/panic.rs:392 Sep 14 18:31:36.171 INFO kablam! at libstd/rt.rs:58 Sep 14 18:31:36.171 INFO kablam! 15: 0x562d5c46fb97 - std::rt::lang_start::hefd2688f4eb786dc Sep 14 18:31:36.171 INFO kablam! at /checkout/src/libstd/rt.rs:74 Sep 14 18:31:36.171 INFO kablam! 16: 0x562d5c46f799 - main Sep 14 18:31:36.171 INFO kablam! 17: 0x7f4e48ab382f - __libc_start_main Sep 14 18:31:36.171 INFO kablam! 18: 0x562d5c46d968 - _start Sep 14 18:31:36.171 INFO kablam! 19: 0x0 - Sep 14 18:31:36.171 INFO kablam! Sep 14 18:31:36.172 INFO kablam! su: No module specific data is present Sep 14 18:31:36.625 INFO running `"docker" "rm" "-f" "99db8c23a1c087ffae27bc341333ef7a41a6d4ecd82bcf0094a2444c0bb9f37a"` Sep 14 18:31:36.751 INFO blam! 99db8c23a1c087ffae27bc341333ef7a41a6d4ecd82bcf0094a2444c0bb9f37a