Aug 17 07:57:59.578 INFO checking transcriptome_translation-0.1.0 against try#a5d98b025f62ace80fe9d2a15781f900fc42515e for pr-53426
Aug 17 07:57:59.578 INFO running: cargo +a5d98b025f62ace80fe9d2a15781f900fc42515e-alt check --frozen --all --all-targets
Aug 17 07:57:59.578 INFO creating container for: cargo +a5d98b025f62ace80fe9d2a15781f900fc42515e-alt check --frozen --all --all-targets
Aug 17 07:57:59.578 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-3/pr-53426/try#a5d98b025f62ace80fe9d2a15781f900fc42515e:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53426/worker-3/try#a5d98b025f62ace80fe9d2a15781f900fc42515e:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +a5d98b025f62ace80fe9d2a15781f900fc42515e-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "crater"`
Aug 17 07:57:59.774 INFO blam! 29d48e5646c49bc67991c035420a63f32329ea11a4f20e97044178a09b3809e5
Aug 17 07:57:59.776 INFO running `"docker" "start" "-a" "29d48e5646c49bc67991c035420a63f32329ea11a4f20e97044178a09b3809e5"`
Aug 17 07:58:01.418 INFO kablam!     Checking nibble_vec v0.0.4
Aug 17 07:58:01.419 INFO kablam!    Compiling phf_macros v0.7.22
Aug 17 07:58:01.421 INFO kablam!     Checking fs2 v0.2.5
Aug 17 07:58:02.271 INFO kablam!     Checking memmap v0.2.3
Aug 17 07:58:02.279 INFO kablam!     Checking radix_trie v0.0.8
Aug 17 07:58:16.147 INFO kablam!     Checking transcriptome_translation v0.1.0 (file:///source)
Aug 17 07:58:16.981 INFO kablam! warning: unused import: `radix_trie::Trie`
Aug 17 07:58:16.981 INFO kablam!   --> src/main.rs:11:5
Aug 17 07:58:16.981 INFO kablam!    |
Aug 17 07:58:16.981 INFO kablam! 11 | use radix_trie::Trie;
Aug 17 07:58:16.981 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Aug 17 07:58:16.981 INFO kablam!    |
Aug 17 07:58:16.981 INFO kablam!    = note: #[warn(unused_imports)] on by default
Aug 17 07:58:16.981 INFO kablam! 
Aug 17 07:58:16.981 INFO kablam! warning: unused import: `std::fs::File`
Aug 17 07:58:16.981 INFO kablam!   --> src/main.rs:13:5
Aug 17 07:58:16.981 INFO kablam!    |
Aug 17 07:58:16.982 INFO kablam! 13 | use std::fs::File;
Aug 17 07:58:16.982 INFO kablam!    |     ^^^^^^^^^^^^^
Aug 17 07:58:16.982 INFO kablam! 
Aug 17 07:58:16.982 INFO kablam! warning: unused import: `std::prelude::*`
Aug 17 07:58:16.982 INFO kablam!   --> src/main.rs:14:5
Aug 17 07:58:16.982 INFO kablam!    |
Aug 17 07:58:16.982 INFO kablam! 14 | use std::prelude::*;
Aug 17 07:58:16.982 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:16.982 INFO kablam! 
Aug 17 07:58:16.982 INFO kablam! warning: unused import: `std::path::Path`
Aug 17 07:58:16.982 INFO kablam!   --> src/main.rs:15:5
Aug 17 07:58:16.982 INFO kablam!    |
Aug 17 07:58:16.982 INFO kablam! 15 | use std::path::Path;
Aug 17 07:58:16.982 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:16.982 INFO kablam! 
Aug 17 07:58:16.982 INFO kablam! warning: unused imports: `GetOutput`, `alphanumeric`, `eof`, `eol`, `multispace`, `newline`
Aug 17 07:58:16.982 INFO kablam!   --> src/main.rs:16:11
Aug 17 07:58:16.982 INFO kablam!    |
Aug 17 07:58:16.982 INFO kablam! 16 | use nom::{alphanumeric, not_line_ending,line_ending,eof,multispace, GetOutput, newline, eol};
Aug 17 07:58:16.982 INFO kablam!    |           ^^^^^^^^^^^^                              ^^^ ^^^^^^^^^^  ^^^^^^^^^  ^^^^^^^  ^^^
Aug 17 07:58:16.982 INFO kablam! 
Aug 17 07:58:16.982 INFO kablam! warning: unused import: `std::iter::Map`
Aug 17 07:58:16.983 INFO kablam!   --> src/main.rs:18:5
Aug 17 07:58:16.983 INFO kablam!    |
Aug 17 07:58:16.983 INFO kablam! 18 | use std::iter::Map;
Aug 17 07:58:16.983 INFO kablam!    |     ^^^^^^^^^^^^^^
Aug 17 07:58:16.983 INFO kablam! 
Aug 17 07:58:16.983 INFO kablam! warning: unused import: `std::str::Chars`
Aug 17 07:58:16.983 INFO kablam!   --> src/main.rs:19:5
Aug 17 07:58:16.983 INFO kablam!    |
Aug 17 07:58:16.983 INFO kablam! 19 | use std::str::Chars;
Aug 17 07:58:16.983 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:16.983 INFO kablam! 
Aug 17 07:58:16.983 INFO kablam! warning: unused import: `std::fmt::Display`
Aug 17 07:58:16.983 INFO kablam!   --> src/main.rs:20:5
Aug 17 07:58:16.983 INFO kablam!    |
Aug 17 07:58:16.983 INFO kablam! 20 | use std::fmt::Display;
Aug 17 07:58:16.983 INFO kablam!    |     ^^^^^^^^^^^^^^^^^
Aug 17 07:58:16.983 INFO kablam! 
Aug 17 07:58:16.983 INFO kablam! warning: unused import: `std::iter::IntoIterator`
Aug 17 07:58:16.983 INFO kablam!   --> src/main.rs:22:5
Aug 17 07:58:16.983 INFO kablam!    |
Aug 17 07:58:16.983 INFO kablam! 22 | use std::iter::IntoIterator;
Aug 17 07:58:16.983 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^
Aug 17 07:58:16.983 INFO kablam! 
Aug 17 07:58:16.983 INFO kablam! warning: unused import: `std::boxed::Box`
Aug 17 07:58:16.983 INFO kablam!   --> src/main.rs:24:5
Aug 17 07:58:16.983 INFO kablam!    |
Aug 17 07:58:16.984 INFO kablam! 24 | use std::boxed::Box;
Aug 17 07:58:16.984 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:16.984 INFO kablam! 
Aug 17 07:58:17.073 INFO kablam! warning: unused import: `radix_trie::Trie`
Aug 17 07:58:17.073 INFO kablam!   --> src/main.rs:11:5
Aug 17 07:58:17.074 INFO kablam!    |
Aug 17 07:58:17.074 INFO kablam! 11 | use radix_trie::Trie;
Aug 17 07:58:17.074 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Aug 17 07:58:17.078 INFO kablam!    |
Aug 17 07:58:17.078 INFO kablam!    = note: #[warn(unused_imports)] on by default
Aug 17 07:58:17.079 INFO kablam! 
Aug 17 07:58:17.079 INFO kablam! warning: unused import: `std::fs::File`
Aug 17 07:58:17.079 INFO kablam!   --> src/main.rs:13:5
Aug 17 07:58:17.079 INFO kablam!    |
Aug 17 07:58:17.079 INFO kablam! 13 | use std::fs::File;
Aug 17 07:58:17.079 INFO kablam!    |     ^^^^^^^^^^^^^
Aug 17 07:58:17.079 INFO kablam! 
Aug 17 07:58:17.080 INFO kablam! warning: unused import: `std::prelude::*`
Aug 17 07:58:17.080 INFO kablam!   --> src/main.rs:14:5
Aug 17 07:58:17.080 INFO kablam!    |
Aug 17 07:58:17.080 INFO kablam! 14 | use std::prelude::*;
Aug 17 07:58:17.080 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:17.080 INFO kablam! 
Aug 17 07:58:17.081 INFO kablam! warning: unused import: `std::path::Path`
Aug 17 07:58:17.081 INFO kablam!   --> src/main.rs:15:5
Aug 17 07:58:17.081 INFO kablam!    |
Aug 17 07:58:17.081 INFO kablam! 15 | use std::path::Path;
Aug 17 07:58:17.081 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:17.081 INFO kablam! 
Aug 17 07:58:17.081 INFO kablam! warning: unused imports: `GetOutput`, `alphanumeric`, `eof`, `eol`, `multispace`, `newline`
Aug 17 07:58:17.081 INFO kablam!   --> src/main.rs:16:11
Aug 17 07:58:17.082 INFO kablam!    |
Aug 17 07:58:17.082 INFO kablam! 16 | use nom::{alphanumeric, not_line_ending,line_ending,eof,multispace, GetOutput, newline, eol};
Aug 17 07:58:17.082 INFO kablam!    |           ^^^^^^^^^^^^                              ^^^ ^^^^^^^^^^  ^^^^^^^^^  ^^^^^^^  ^^^
Aug 17 07:58:17.082 INFO kablam! 
Aug 17 07:58:17.082 INFO kablam! warning: unused import: `std::iter::Map`
Aug 17 07:58:17.082 INFO kablam!   --> src/main.rs:18:5
Aug 17 07:58:17.082 INFO kablam!    |
Aug 17 07:58:17.082 INFO kablam! 18 | use std::iter::Map;
Aug 17 07:58:17.082 INFO kablam!    |     ^^^^^^^^^^^^^^
Aug 17 07:58:17.082 INFO kablam! 
Aug 17 07:58:17.083 INFO kablam! warning: unused import: `std::str::Chars`
Aug 17 07:58:17.083 INFO kablam!   --> src/main.rs:19:5
Aug 17 07:58:17.083 INFO kablam!    |
Aug 17 07:58:17.083 INFO kablam! 19 | use std::str::Chars;
Aug 17 07:58:17.083 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:17.083 INFO kablam! 
Aug 17 07:58:17.083 INFO kablam! warning: unused import: `std::fmt::Display`
Aug 17 07:58:17.084 INFO kablam!   --> src/main.rs:20:5
Aug 17 07:58:17.084 INFO kablam!    |
Aug 17 07:58:17.084 INFO kablam! 20 | use std::fmt::Display;
Aug 17 07:58:17.084 INFO kablam!    |     ^^^^^^^^^^^^^^^^^
Aug 17 07:58:17.084 INFO kablam! 
Aug 17 07:58:17.084 INFO kablam! warning: unused import: `std::iter::IntoIterator`
Aug 17 07:58:17.084 INFO kablam!   --> src/main.rs:22:5
Aug 17 07:58:17.084 INFO kablam!    |
Aug 17 07:58:17.084 INFO kablam! 22 | use std::iter::IntoIterator;
Aug 17 07:58:17.084 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^^^^
Aug 17 07:58:17.084 INFO kablam! 
Aug 17 07:58:17.084 INFO kablam! warning: unused import: `std::boxed::Box`
Aug 17 07:58:17.084 INFO kablam!   --> src/main.rs:24:5
Aug 17 07:58:17.084 INFO kablam!    |
Aug 17 07:58:17.084 INFO kablam! 24 | use std::boxed::Box;
Aug 17 07:58:17.085 INFO kablam!    |     ^^^^^^^^^^^^^^^
Aug 17 07:58:17.085 INFO kablam! 
Aug 17 07:58:18.266 INFO kablam! warning: unused variable: `o`
Aug 17 07:58:18.266 INFO kablam!    --> src/main.rs:293:27
Aug 17 07:58:18.267 INFO kablam!     |
Aug 17 07:58:18.267 INFO kablam! 293 |     if let IResult::Done( o, parsed) = FASTA_Read_AA(bytes) {
Aug 17 07:58:18.267 INFO kablam!     |                           ^ help: consider using `_o` instead
Aug 17 07:58:18.278 INFO kablam! warning: unused variable: `o`
Aug 17 07:58:18.278 INFO kablam!    --> src/main.rs:293:27
Aug 17 07:58:18.278 INFO kablam!     |
Aug 17 07:58:18.278 INFO kablam! 293 |     if let IResult::Done( o, parsed) = FASTA_Read_AA(bytes) {
Aug 17 07:58:18.278 INFO kablam!     |                           ^ help: consider using `_o` instead
Aug 17 07:58:18.278 INFO kablam!     |
Aug 17 07:58:18.279 INFO kablam!     = note: #[warn(unused_variables)] on by default
Aug 17 07:58:18.279 INFO kablam! 
Aug 17 07:58:18.279 INFO kablam!     |
Aug 17 07:58:18.279 INFO kablam!     = note: #[warn(unused_variables)] on by default
Aug 17 07:58:18.279 INFO kablam! 
Aug 17 07:58:18.374 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.374 INFO kablam!    --> src/main.rs:308:15
Aug 17 07:58:18.374 INFO kablam!     |
Aug 17 07:58:18.374 INFO kablam! 308 |           let mut id = s.id;
Aug 17 07:58:18.374 INFO kablam!     |               ----^^
Aug 17 07:58:18.374 INFO kablam!     |               |
Aug 17 07:58:18.374 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.382 INFO kablam!     |
Aug 17 07:58:18.382 INFO kablam!     = note: #[warn(unused_mut)] on by default
Aug 17 07:58:18.383 INFO kablam! 
Aug 17 07:58:18.383 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.383 INFO kablam!    --> src/main.rs:309:15
Aug 17 07:58:18.383 INFO kablam!     |
Aug 17 07:58:18.383 INFO kablam! 309 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.383 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.383 INFO kablam!     |               |
Aug 17 07:58:18.383 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.383 INFO kablam! 
Aug 17 07:58:18.384 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.384 INFO kablam!    --> src/main.rs:310:15
Aug 17 07:58:18.384 INFO kablam!     |
Aug 17 07:58:18.384 INFO kablam! 310 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.384 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.384 INFO kablam!     |               |
Aug 17 07:58:18.384 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.384 INFO kablam! 
Aug 17 07:58:18.384 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.384 INFO kablam!    --> src/main.rs:316:15
Aug 17 07:58:18.384 INFO kablam!     |
Aug 17 07:58:18.384 INFO kablam! 316 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.384 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.384 INFO kablam!     |               |
Aug 17 07:58:18.384 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.384 INFO kablam! 
Aug 17 07:58:18.384 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.384 INFO kablam!    --> src/main.rs:317:15
Aug 17 07:58:18.384 INFO kablam!     |
Aug 17 07:58:18.385 INFO kablam! 317 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.385 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.385 INFO kablam!     |               |
Aug 17 07:58:18.385 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.385 INFO kablam! 
Aug 17 07:58:18.386 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.386 INFO kablam!    --> src/main.rs:323:15
Aug 17 07:58:18.386 INFO kablam!     |
Aug 17 07:58:18.386 INFO kablam! 323 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.386 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.386 INFO kablam!     |               |
Aug 17 07:58:18.386 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.386 INFO kablam! 
Aug 17 07:58:18.386 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.386 INFO kablam!    --> src/main.rs:324:15
Aug 17 07:58:18.386 INFO kablam!     |
Aug 17 07:58:18.386 INFO kablam! 324 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.387 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.387 INFO kablam!     |               |
Aug 17 07:58:18.387 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.387 INFO kablam! 
Aug 17 07:58:18.387 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.387 INFO kablam!    --> src/main.rs:330:15
Aug 17 07:58:18.387 INFO kablam!     |
Aug 17 07:58:18.387 INFO kablam! 330 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.387 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.387 INFO kablam!     |               |
Aug 17 07:58:18.387 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.387 INFO kablam! 
Aug 17 07:58:18.387 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.387 INFO kablam!    --> src/main.rs:331:15
Aug 17 07:58:18.387 INFO kablam!     |
Aug 17 07:58:18.387 INFO kablam! 331 |           let mut amino_seq = amino_seq.join("");
Aug 17 07:58:18.387 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.387 INFO kablam!     |               |
Aug 17 07:58:18.387 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.387 INFO kablam! 
Aug 17 07:58:18.387 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.387 INFO kablam!    --> src/main.rs:332:15
Aug 17 07:58:18.387 INFO kablam!     |
Aug 17 07:58:18.387 INFO kablam! 332 |           let mut amino_seq = amino_seq.into_bytes();
Aug 17 07:58:18.387 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.388 INFO kablam!     |               |
Aug 17 07:58:18.388 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.388 INFO kablam! 
Aug 17 07:58:18.388 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.388 INFO kablam!    --> src/main.rs:338:15
Aug 17 07:58:18.388 INFO kablam!     |
Aug 17 07:58:18.388 INFO kablam! 338 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.388 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.388 INFO kablam!     |               |
Aug 17 07:58:18.388 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.388 INFO kablam! 
Aug 17 07:58:18.388 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.388 INFO kablam!    --> src/main.rs:339:15
Aug 17 07:58:18.388 INFO kablam!     |
Aug 17 07:58:18.388 INFO kablam! 339 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.388 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.388 INFO kablam!     |               |
Aug 17 07:58:18.388 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.388 INFO kablam! 
Aug 17 07:58:18.388 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.388 INFO kablam!    --> src/main.rs:346:15
Aug 17 07:58:18.388 INFO kablam!     |
Aug 17 07:58:18.388 INFO kablam! 346 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.388 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.389 INFO kablam!     |               |
Aug 17 07:58:18.389 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.389 INFO kablam! 
Aug 17 07:58:18.389 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.389 INFO kablam!    --> src/main.rs:347:15
Aug 17 07:58:18.389 INFO kablam!     |
Aug 17 07:58:18.389 INFO kablam! 347 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.389 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.389 INFO kablam!     |               |
Aug 17 07:58:18.389 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.389 INFO kablam! 
Aug 17 07:58:18.448 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.448 INFO kablam!    --> src/main.rs:308:15
Aug 17 07:58:18.448 INFO kablam!     |
Aug 17 07:58:18.448 INFO kablam! 308 |           let mut id = s.id;
Aug 17 07:58:18.448 INFO kablam!     |               ----^^
Aug 17 07:58:18.448 INFO kablam!     |               |
Aug 17 07:58:18.448 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.449 INFO kablam!     |
Aug 17 07:58:18.449 INFO kablam!     = note: #[warn(unused_mut)] on by default
Aug 17 07:58:18.449 INFO kablam! 
Aug 17 07:58:18.449 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.449 INFO kablam!    --> src/main.rs:309:15
Aug 17 07:58:18.449 INFO kablam!     |
Aug 17 07:58:18.449 INFO kablam! 309 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.449 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.449 INFO kablam!     |               |
Aug 17 07:58:18.449 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.449 INFO kablam! 
Aug 17 07:58:18.449 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.450 INFO kablam!    --> src/main.rs:310:15
Aug 17 07:58:18.450 INFO kablam!     |
Aug 17 07:58:18.450 INFO kablam! 310 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.450 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.450 INFO kablam!     |               |
Aug 17 07:58:18.450 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.450 INFO kablam! 
Aug 17 07:58:18.450 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.450 INFO kablam!    --> src/main.rs:316:15
Aug 17 07:58:18.450 INFO kablam!     |
Aug 17 07:58:18.450 INFO kablam! 316 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.450 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.450 INFO kablam!     |               |
Aug 17 07:58:18.450 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.450 INFO kablam! 
Aug 17 07:58:18.450 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.450 INFO kablam!    --> src/main.rs:317:15
Aug 17 07:58:18.450 INFO kablam!     |
Aug 17 07:58:18.450 INFO kablam! 317 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.450 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.450 INFO kablam!     |               |
Aug 17 07:58:18.450 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.450 INFO kablam! 
Aug 17 07:58:18.451 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.451 INFO kablam!    --> src/main.rs:323:15
Aug 17 07:58:18.451 INFO kablam!     |
Aug 17 07:58:18.451 INFO kablam! 323 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.451 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.451 INFO kablam!     |               |
Aug 17 07:58:18.451 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.451 INFO kablam! 
Aug 17 07:58:18.453 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.453 INFO kablam!    --> src/main.rs:324:15
Aug 17 07:58:18.453 INFO kablam!     |
Aug 17 07:58:18.453 INFO kablam! 324 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.453 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.453 INFO kablam!     |               |
Aug 17 07:58:18.453 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.453 INFO kablam! 
Aug 17 07:58:18.453 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.453 INFO kablam!    --> src/main.rs:330:15
Aug 17 07:58:18.453 INFO kablam!     |
Aug 17 07:58:18.453 INFO kablam! 330 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.453 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.453 INFO kablam!     |               |
Aug 17 07:58:18.453 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.453 INFO kablam! 
Aug 17 07:58:18.453 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.453 INFO kablam!    --> src/main.rs:331:15
Aug 17 07:58:18.453 INFO kablam!     |
Aug 17 07:58:18.453 INFO kablam! 331 |           let mut amino_seq = amino_seq.join("");
Aug 17 07:58:18.453 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.453 INFO kablam!     |               |
Aug 17 07:58:18.453 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.454 INFO kablam! 
Aug 17 07:58:18.454 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.454 INFO kablam!    --> src/main.rs:332:15
Aug 17 07:58:18.454 INFO kablam!     |
Aug 17 07:58:18.454 INFO kablam! 332 |           let mut amino_seq = amino_seq.into_bytes();
Aug 17 07:58:18.454 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.454 INFO kablam!     |               |
Aug 17 07:58:18.454 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.454 INFO kablam! 
Aug 17 07:58:18.455 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.455 INFO kablam!    --> src/main.rs:338:15
Aug 17 07:58:18.455 INFO kablam!     |
Aug 17 07:58:18.455 INFO kablam! 338 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.455 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.455 INFO kablam!     |               |
Aug 17 07:58:18.456 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.456 INFO kablam! 
Aug 17 07:58:18.456 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.456 INFO kablam!    --> src/main.rs:339:15
Aug 17 07:58:18.456 INFO kablam!     |
Aug 17 07:58:18.456 INFO kablam! 339 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.456 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.456 INFO kablam!     |               |
Aug 17 07:58:18.456 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.456 INFO kablam! 
Aug 17 07:58:18.456 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.456 INFO kablam!    --> src/main.rs:346:15
Aug 17 07:58:18.456 INFO kablam!     |
Aug 17 07:58:18.456 INFO kablam! 346 |           let mut amino_seq: Vec<&str> = seq.drain(..).collect::<Vec<&str>>();
Aug 17 07:58:18.456 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.456 INFO kablam!     |               |
Aug 17 07:58:18.456 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.456 INFO kablam! 
Aug 17 07:58:18.456 INFO kablam! warning: variable does not need to be mutable
Aug 17 07:58:18.456 INFO kablam!    --> src/main.rs:347:15
Aug 17 07:58:18.456 INFO kablam!     |
Aug 17 07:58:18.456 INFO kablam! 347 |           let mut amino_seq = amino_seq.join("").into_bytes();
Aug 17 07:58:18.456 INFO kablam!     |               ----^^^^^^^^^
Aug 17 07:58:18.456 INFO kablam!     |               |
Aug 17 07:58:18.456 INFO kablam!     |               help: remove this `mut`
Aug 17 07:58:18.457 INFO kablam! 
Aug 17 07:58:18.620 INFO kablam! warning: the feature `type_macros` has been stable since 1.13.0 and no longer requires an attribute to enable
Aug 17 07:58:18.620 INFO kablam!  --> src/main.rs:2:12
Aug 17 07:58:18.620 INFO kablam!   |
Aug 17 07:58:18.620 INFO kablam! 2 | #![feature(type_macros)]
Aug 17 07:58:18.620 INFO kablam!   |            ^^^^^^^^^^^
Aug 17 07:58:18.620 INFO kablam!   |
Aug 17 07:58:18.621 INFO kablam!   = note: #[warn(stable_features)] on by default
Aug 17 07:58:18.621 INFO kablam! 
Aug 17 07:58:18.628 INFO kablam! warning: type `FASTA_AA` should have a camel case name such as `FastaAa`
Aug 17 07:58:18.628 INFO kablam!   --> src/main.rs:27:1
Aug 17 07:58:18.628 INFO kablam!    |
Aug 17 07:58:18.628 INFO kablam! 27 | / pub struct FASTA_AA<'a> {
Aug 17 07:58:18.628 INFO kablam! 28 | |     pub id: &'a str,
Aug 17 07:58:18.628 INFO kablam! 29 | |     pub sequence: Vec<&'a str>
Aug 17 07:58:18.628 INFO kablam! 30 | | }
Aug 17 07:58:18.628 INFO kablam!    | |_^
Aug 17 07:58:18.642 INFO kablam!    |
Aug 17 07:58:18.643 INFO kablam!    = note: #[warn(non_camel_case_types)] on by default
Aug 17 07:58:18.643 INFO kablam! 
Aug 17 07:58:18.643 INFO kablam! warning: type `FASTA_Nucleotide` should have a camel case name such as `FastaNucleotide`
Aug 17 07:58:18.644 INFO kablam!   --> src/main.rs:33:1
Aug 17 07:58:18.644 INFO kablam!    |
Aug 17 07:58:18.644 INFO kablam! 33 | / pub struct FASTA_Nucleotide<'a> {
Aug 17 07:58:18.644 INFO kablam! 34 | |     pub id: &'a str,
Aug 17 07:58:18.644 INFO kablam! 35 | |     pub sequence: Vec<Nucleotide_Base>
Aug 17 07:58:18.644 INFO kablam! 36 | | }
Aug 17 07:58:18.644 INFO kablam!    | |_^
Aug 17 07:58:18.644 INFO kablam! 
Aug 17 07:58:18.644 INFO kablam! warning: type `AA_Base` should have a camel case name such as `AaBase`
Aug 17 07:58:18.644 INFO kablam!   --> src/main.rs:39:1
Aug 17 07:58:18.644 INFO kablam!    |
Aug 17 07:58:18.644 INFO kablam! 39 | / pub struct AA_Base {
Aug 17 07:58:18.644 INFO kablam! 40 | |     pub key: AA_Key
Aug 17 07:58:18.644 INFO kablam! 41 | | }
Aug 17 07:58:18.644 INFO kablam!    | |_^
Aug 17 07:58:18.645 INFO kablam! 
Aug 17 07:58:18.645 INFO kablam! warning: type `Nucleotide_Base` should have a camel case name such as `NucleotideBase`
Aug 17 07:58:18.645 INFO kablam!   --> src/main.rs:43:1
Aug 17 07:58:18.645 INFO kablam!    |
Aug 17 07:58:18.645 INFO kablam! 43 | / pub struct Nucleotide_Base {
Aug 17 07:58:18.645 INFO kablam! 44 | |     pub key: FASTA_Nucleotide_Key
Aug 17 07:58:18.645 INFO kablam! 45 | | }
Aug 17 07:58:18.645 INFO kablam!    | |_^
Aug 17 07:58:18.645 INFO kablam! 
Aug 17 07:58:18.646 INFO kablam! warning: type `FASTA_Nucleotide_Key` should have a camel case name such as `FastaNucleotideKey`
Aug 17 07:58:18.646 INFO kablam!   --> src/main.rs:48:1
Aug 17 07:58:18.646 INFO kablam!    |
Aug 17 07:58:18.646 INFO kablam! 48 | / pub enum FASTA_Nucleotide_Key {
Aug 17 07:58:18.646 INFO kablam! 49 | |     A,
Aug 17 07:58:18.646 INFO kablam! 50 | |     C,
Aug 17 07:58:18.646 INFO kablam! 51 | |     G,
Aug 17 07:58:18.646 INFO kablam! ...  |
Aug 17 07:58:18.646 INFO kablam! 66 | |     Asterisk = b'*'
Aug 17 07:58:18.646 INFO kablam! 67 | | }
Aug 17 07:58:18.646 INFO kablam!    | |_^
Aug 17 07:58:18.646 INFO kablam! 
Aug 17 07:58:18.647 INFO kablam! warning: type `AA_Key` should have a camel case name such as `AaKey`
Aug 17 07:58:18.647 INFO kablam!    --> src/main.rs:70:1
Aug 17 07:58:18.647 INFO kablam!     |
Aug 17 07:58:18.647 INFO kablam! 70  | / pub enum AA_Key {
Aug 17 07:58:18.647 INFO kablam! 71  | |     A, //Alanine
Aug 17 07:58:18.647 INFO kablam! 72  | |     B, //Aspartic Acid (D) or Asparagine (N)
Aug 17 07:58:18.647 INFO kablam! 73  | |     C, //Cysteine
Aug 17 07:58:18.647 INFO kablam! ...   |
Aug 17 07:58:18.647 INFO kablam! 99  | |     Error
Aug 17 07:58:18.647 INFO kablam! 100 | | }
Aug 17 07:58:18.647 INFO kablam!     | |_^
Aug 17 07:58:18.647 INFO kablam! 
Aug 17 07:58:18.653 INFO kablam! warning: type `Human_Readable_AA` should have a camel case name such as `HumanReadableAa`
Aug 17 07:58:18.653 INFO kablam!    --> src/main.rs:278:1
Aug 17 07:58:18.653 INFO kablam!     |
Aug 17 07:58:18.653 INFO kablam! 278 | / pub enum Human_Readable_AA {
Aug 17 07:58:18.653 INFO kablam! 279 | |     Adenine,
Aug 17 07:58:18.653 INFO kablam! 280 | |     Cytosine,
Aug 17 07:58:18.653 INFO kablam! 281 | |     Guanine,
Aug 17 07:58:18.653 INFO kablam! ...   |
Aug 17 07:58:18.653 INFO kablam! 285 | |     Pyrimidines,
Aug 17 07:58:18.653 INFO kablam! 286 | | }
Aug 17 07:58:18.653 INFO kablam!     | |_^
Aug 17 07:58:18.670 INFO kablam! 
Aug 17 07:58:18.673 INFO kablam! warning: function `FASTA_Read_AA` should have a snake case name such as `fasta_read_aa`
Aug 17 07:58:18.673 INFO kablam!    --> src/main.rs:649:1
Aug 17 07:58:18.673 INFO kablam!     |
Aug 17 07:58:18.673 INFO kablam! 649 | / pub fn FASTA_Read_AA(input:&[u8]) -> IResult<&[u8], Vec<FASTA_AA>>  {
Aug 17 07:58:18.673 INFO kablam! 650 | |     many0!(input,
Aug 17 07:58:18.674 INFO kablam! 651 | |       chain!(
Aug 17 07:58:18.674 INFO kablam! 652 | |         tag!(">") ~
Aug 17 07:58:18.674 INFO kablam! ...   |
Aug 17 07:58:18.674 INFO kablam! 662 | |    )
Aug 17 07:58:18.674 INFO kablam! 663 | | }
Aug 17 07:58:18.674 INFO kablam!     | |_^
Aug 17 07:58:18.674 INFO kablam!     |
Aug 17 07:58:18.674 INFO kablam!     = note: #[warn(non_snake_case)] on by default
Aug 17 07:58:18.674 INFO kablam! 
Aug 17 07:58:18.716 INFO kablam! warning: the feature `type_macros` has been stable since 1.13.0 and no longer requires an attribute to enable
Aug 17 07:58:18.716 INFO kablam!  --> src/main.rs:2:12
Aug 17 07:58:18.716 INFO kablam!   |
Aug 17 07:58:18.716 INFO kablam! 2 | #![feature(type_macros)]
Aug 17 07:58:18.716 INFO kablam!   |            ^^^^^^^^^^^
Aug 17 07:58:18.716 INFO kablam!   |
Aug 17 07:58:18.716 INFO kablam!   = note: #[warn(stable_features)] on by default
Aug 17 07:58:18.716 INFO kablam! 
Aug 17 07:58:18.724 INFO kablam! warning: type `FASTA_AA` should have a camel case name such as `FastaAa`
Aug 17 07:58:18.725 INFO kablam!   --> src/main.rs:27:1
Aug 17 07:58:18.725 INFO kablam!    |
Aug 17 07:58:18.725 INFO kablam! 27 | / pub struct FASTA_AA<'a> {
Aug 17 07:58:18.725 INFO kablam! 28 | |     pub id: &'a str,
Aug 17 07:58:18.725 INFO kablam! 29 | |     pub sequence: Vec<&'a str>
Aug 17 07:58:18.725 INFO kablam! 30 | | }
Aug 17 07:58:18.725 INFO kablam!    | |_^
Aug 17 07:58:18.725 INFO kablam!    |
Aug 17 07:58:18.725 INFO kablam!    = note: #[warn(non_camel_case_types)] on by default
Aug 17 07:58:18.725 INFO kablam! 
Aug 17 07:58:18.726 INFO kablam! warning: type `FASTA_Nucleotide` should have a camel case name such as `FastaNucleotide`
Aug 17 07:58:18.726 INFO kablam!   --> src/main.rs:33:1
Aug 17 07:58:18.726 INFO kablam!    |
Aug 17 07:58:18.726 INFO kablam! 33 | / pub struct FASTA_Nucleotide<'a> {
Aug 17 07:58:18.726 INFO kablam! 34 | |     pub id: &'a str,
Aug 17 07:58:18.726 INFO kablam! 35 | |     pub sequence: Vec<Nucleotide_Base>
Aug 17 07:58:18.726 INFO kablam! 36 | | }
Aug 17 07:58:18.726 INFO kablam!    | |_^
Aug 17 07:58:18.726 INFO kablam! 
Aug 17 07:58:18.726 INFO kablam! warning: type `AA_Base` should have a camel case name such as `AaBase`
Aug 17 07:58:18.726 INFO kablam!   --> src/main.rs:39:1
Aug 17 07:58:18.726 INFO kablam!    |
Aug 17 07:58:18.726 INFO kablam! 39 | / pub struct AA_Base {
Aug 17 07:58:18.726 INFO kablam! 40 | |     pub key: AA_Key
Aug 17 07:58:18.726 INFO kablam! 41 | | }
Aug 17 07:58:18.726 INFO kablam!    | |_^
Aug 17 07:58:18.726 INFO kablam! 
Aug 17 07:58:18.727 INFO kablam! warning: type `Nucleotide_Base` should have a camel case name such as `NucleotideBase`
Aug 17 07:58:18.727 INFO kablam!   --> src/main.rs:43:1
Aug 17 07:58:18.727 INFO kablam!    |
Aug 17 07:58:18.727 INFO kablam! 43 | / pub struct Nucleotide_Base {
Aug 17 07:58:18.727 INFO kablam! 44 | |     pub key: FASTA_Nucleotide_Key
Aug 17 07:58:18.727 INFO kablam! 45 | | }
Aug 17 07:58:18.727 INFO kablam!    | |_^
Aug 17 07:58:18.727 INFO kablam! 
Aug 17 07:58:18.727 INFO kablam! warning: type `FASTA_Nucleotide_Key` should have a camel case name such as `FastaNucleotideKey`
Aug 17 07:58:18.728 INFO kablam!   --> src/main.rs:48:1
Aug 17 07:58:18.728 INFO kablam!    |
Aug 17 07:58:18.728 INFO kablam! 48 | / pub enum FASTA_Nucleotide_Key {
Aug 17 07:58:18.728 INFO kablam! 49 | |     A,
Aug 17 07:58:18.728 INFO kablam! 50 | |     C,
Aug 17 07:58:18.728 INFO kablam! 51 | |     G,
Aug 17 07:58:18.728 INFO kablam! ...  |
Aug 17 07:58:18.728 INFO kablam! 66 | |     Asterisk = b'*'
Aug 17 07:58:18.728 INFO kablam! 67 | | }
Aug 17 07:58:18.728 INFO kablam!    | |_^
Aug 17 07:58:18.728 INFO kablam! 
Aug 17 07:58:18.728 INFO kablam! warning: type `AA_Key` should have a camel case name such as `AaKey`
Aug 17 07:58:18.728 INFO kablam!    --> src/main.rs:70:1
Aug 17 07:58:18.728 INFO kablam!     |
Aug 17 07:58:18.728 INFO kablam! 70  | / pub enum AA_Key {
Aug 17 07:58:18.729 INFO kablam! 71  | |     A, //Alanine
Aug 17 07:58:18.729 INFO kablam! 72  | |     B, //Aspartic Acid (D) or Asparagine (N)
Aug 17 07:58:18.729 INFO kablam! 73  | |     C, //Cysteine
Aug 17 07:58:18.729 INFO kablam! ...   |
Aug 17 07:58:18.729 INFO kablam! 99  | |     Error
Aug 17 07:58:18.729 INFO kablam! 100 | | }
Aug 17 07:58:18.729 INFO kablam!     | |_^
Aug 17 07:58:18.729 INFO kablam! 
Aug 17 07:58:18.735 INFO kablam! warning: type `Human_Readable_AA` should have a camel case name such as `HumanReadableAa`
Aug 17 07:58:18.735 INFO kablam!    --> src/main.rs:278:1
Aug 17 07:58:18.735 INFO kablam!     |
Aug 17 07:58:18.735 INFO kablam! 278 | / pub enum Human_Readable_AA {
Aug 17 07:58:18.735 INFO kablam! 279 | |     Adenine,
Aug 17 07:58:18.735 INFO kablam! 280 | |     Cytosine,
Aug 17 07:58:18.735 INFO kablam! 281 | |     Guanine,
Aug 17 07:58:18.735 INFO kablam! ...   |
Aug 17 07:58:18.735 INFO kablam! 285 | |     Pyrimidines,
Aug 17 07:58:18.735 INFO kablam! 286 | | }
Aug 17 07:58:18.735 INFO kablam!     | |_^
Aug 17 07:58:18.735 INFO kablam! 
Aug 17 07:58:18.738 INFO kablam! warning: function `FASTA_Read_AA` should have a snake case name such as `fasta_read_aa`
Aug 17 07:58:18.738 INFO kablam!    --> src/main.rs:649:1
Aug 17 07:58:18.738 INFO kablam!     |
Aug 17 07:58:18.738 INFO kablam! 649 | / pub fn FASTA_Read_AA(input:&[u8]) -> IResult<&[u8], Vec<FASTA_AA>>  {
Aug 17 07:58:18.738 INFO kablam! 650 | |     many0!(input,
Aug 17 07:58:18.738 INFO kablam! 651 | |       chain!(
Aug 17 07:58:18.739 INFO kablam! 652 | |         tag!(">") ~
Aug 17 07:58:18.739 INFO kablam! ...   |
Aug 17 07:58:18.739 INFO kablam! 662 | |    )
Aug 17 07:58:18.739 INFO kablam! 663 | | }
Aug 17 07:58:18.739 INFO kablam!     | |_^
Aug 17 07:58:18.739 INFO kablam!     |
Aug 17 07:58:18.739 INFO kablam!     = note: #[warn(non_snake_case)] on by default
Aug 17 07:58:18.739 INFO kablam! 
Aug 17 07:58:18.795 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 17.47s
Aug 17 07:58:18.819 INFO kablam! su: No module specific data is present
Aug 17 07:58:19.431 INFO running `"docker" "rm" "-f" "29d48e5646c49bc67991c035420a63f32329ea11a4f20e97044178a09b3809e5"`
Aug 17 07:58:19.621 INFO blam! 29d48e5646c49bc67991c035420a63f32329ea11a4f20e97044178a09b3809e5