Aug 18 01:50:03.305 INFO checking chemfiles-sys-0.5.0 against master#142bb27373126edf8367f526358b6c72ecf1d8df for pr-53426 Aug 18 01:50:03.305 INFO running: cargo +142bb27373126edf8367f526358b6c72ecf1d8df-alt check --frozen --all --all-targets Aug 18 01:50:03.305 INFO creating container for: cargo +142bb27373126edf8367f526358b6c72ecf1d8df-alt check --frozen --all --all-targets Aug 18 01:50:03.305 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-1/pr-53426/master#142bb27373126edf8367f526358b6c72ecf1d8df:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-53426/worker-1/master#142bb27373126edf8367f526358b6c72ecf1d8df:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +142bb27373126edf8367f526358b6c72ecf1d8df-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "crater"` Aug 18 01:50:03.535 INFO blam! 60fa8efd82d26cc1e41000d910c4c9b6a0e7eb0d4b31542a293ece491870afe2 Aug 18 01:50:03.537 INFO running `"docker" "start" "-a" "60fa8efd82d26cc1e41000d910c4c9b6a0e7eb0d4b31542a293ece491870afe2"` Aug 18 01:50:04.529 INFO kablam! Compiling chemfiles-sys v0.5.0 (file:///source) Aug 18 01:50:12.308 INFO kablam! error: failed to run custom build command for `chemfiles-sys v0.5.0 (file:///source)` Aug 18 01:50:12.308 INFO kablam! process didn't exit successfully: `/target/debug/build/chemfiles-sys-8126d08706990c0b/build-script-build` (exit code: 101) Aug 18 01:50:12.308 INFO kablam! --- stdout Aug 18 01:50:12.308 INFO kablam! running: "cmake" "/source/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/target/debug/build/chemfiles-sys-473eeb0c1b3dbaa0/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug" Aug 18 01:50:12.308 INFO kablam! -- The C compiler identification is GNU 5.4.0 Aug 18 01:50:12.308 INFO kablam! -- The CXX compiler identification is GNU 5.4.0 Aug 18 01:50:12.308 INFO kablam! -- Check for working C compiler: /usr/bin/cc Aug 18 01:50:12.308 INFO kablam! -- Check for working C compiler: /usr/bin/cc -- works Aug 18 01:50:12.308 INFO kablam! -- Detecting C compiler ABI info Aug 18 01:50:12.308 INFO kablam! -- Detecting C compiler ABI info - done Aug 18 01:50:12.308 INFO kablam! -- Detecting C compile features Aug 18 01:50:12.308 INFO kablam! -- Detecting C compile features - done Aug 18 01:50:12.308 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ Aug 18 01:50:12.308 INFO kablam! -- Check for working CXX compiler: /usr/bin/c++ -- works Aug 18 01:50:12.308 INFO kablam! -- Detecting CXX compiler ABI info Aug 18 01:50:12.308 INFO kablam! -- Detecting CXX compiler ABI info - done Aug 18 01:50:12.308 INFO kablam! -- Detecting CXX compile features Aug 18 01:50:12.308 INFO kablam! -- Detecting CXX compile features - done Aug 18 01:50:12.309 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 Aug 18 01:50:12.309 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX11 - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X Aug 18 01:50:12.309 INFO kablam! -- Performing Test COMPILER_SUPPORTS_CXX0X - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wall - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wall Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wall - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wuninitialized - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wuninitialized - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wconversion - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wconversion - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-conversion - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion Aug 18 01:50:12.309 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-conversion - Success Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo Aug 18 01:50:12.309 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsign-promo - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wsign-promo - Failed Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-override - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-override - Failed Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wsuggest-final-types - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wsuggest-final-types - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wpedantic - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wpedantic - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-pedantic - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-pedantic - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdocumentation - Failed Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wdocumentation - Failed Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated Aug 18 01:50:12.310 INFO kablam! -- Performing Test CXX_SUPPORTS-Wdeprecated - Success Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated Aug 18 01:50:12.310 INFO kablam! -- Performing Test CC_SUPPORTS-Wdeprecated - Success Aug 18 01:50:12.311 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi Aug 18 01:50:12.311 INFO kablam! -- Performing Test CXX_SUPPORTS-Wextra-semi - Failed Aug 18 01:50:12.311 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi Aug 18 01:50:12.311 INFO kablam! -- Performing Test CC_SUPPORTS-Wextra-semi - Failed Aug 18 01:50:12.311 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression Aug 18 01:50:12.311 INFO kablam! -- Performing Test CXX_SUPPORTS-Wno-potentially-evaluated-expression - Failed Aug 18 01:50:12.311 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression Aug 18 01:50:12.311 INFO kablam! -- Performing Test CC_SUPPORTS-Wno-potentially-evaluated-expression - Failed Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_SUPPORTS_C99 - Success Aug 18 01:50:12.311 INFO kablam! -- Found NetCDF: /usr/lib/x86_64-linux-gnu/libnetcdf.so Aug 18 01:50:12.311 INFO kablam! -- Found NetCDF library. Consider activating the associated format with -DENABLE_NETCDF=ON Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR Aug 18 01:50:12.311 INFO kablam! -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success Aug 18 01:50:12.311 INFO kablam! -- Configuring incomplete, errors occurred! Aug 18 01:50:12.311 INFO kablam! See also "/target/debug/build/chemfiles-sys-473eeb0c1b3dbaa0/out/build/CMakeFiles/CMakeOutput.log". Aug 18 01:50:12.311 INFO kablam! See also "/target/debug/build/chemfiles-sys-473eeb0c1b3dbaa0/out/build/CMakeFiles/CMakeError.log". Aug 18 01:50:12.312 INFO kablam! Aug 18 01:50:12.312 INFO kablam! --- stderr Aug 18 01:50:12.312 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/exports.hpp.tmp Aug 18 01:50:12.312 INFO kablam! CMake Error: : System Error: Read-only file system Aug 18 01:50:12.312 INFO kablam! CMake Error at /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:362 (configure_file): Aug 18 01:50:12.312 INFO kablam! configure_file Problem configuring file Aug 18 01:50:12.312 INFO kablam! Call Stack (most recent call first): Aug 18 01:50:12.312 INFO kablam! /usr/share/cmake-3.5/Modules/GenerateExportHeader.cmake:378 (_do_generate_export_header) Aug 18 01:50:12.312 INFO kablam! chemfiles/CMakeLists.txt:71 (generate_export_header) Aug 18 01:50:12.312 INFO kablam! Aug 18 01:50:12.312 INFO kablam! Aug 18 01:50:12.312 INFO kablam! CMake Error: Could not open file for write in copy operation /source/chemfiles/include/chemfiles/config.hpp.tmp Aug 18 01:50:12.312 INFO kablam! CMake Error: : System Error: Read-only file system Aug 18 01:50:12.312 INFO kablam! CMake Error at chemfiles/CMakeLists.txt:77 (configure_file): Aug 18 01:50:12.312 INFO kablam! configure_file Problem configuring file Aug 18 01:50:12.312 INFO kablam! Aug 18 01:50:12.312 INFO kablam! Aug 18 01:50:12.312 INFO kablam! CMake Warning (dev) in CMakeLists.txt: Aug 18 01:50:12.312 INFO kablam! No cmake_minimum_required command is present. A line of code such as Aug 18 01:50:12.312 INFO kablam! Aug 18 01:50:12.312 INFO kablam! cmake_minimum_required(VERSION 3.5) Aug 18 01:50:12.313 INFO kablam! Aug 18 01:50:12.313 INFO kablam! should be added at the top of the file. The version specified may be lower Aug 18 01:50:12.313 INFO kablam! if you wish to support older CMake versions for this project. For more Aug 18 01:50:12.313 INFO kablam! information run "cmake --help-policy CMP0000". Aug 18 01:50:12.313 INFO kablam! This warning is for project developers. Use -Wno-dev to suppress it. Aug 18 01:50:12.313 INFO kablam! Aug 18 01:50:12.313 INFO kablam! thread 'main' panicked at ' Aug 18 01:50:12.313 INFO kablam! command did not execute successfully, got: exit code: 1 Aug 18 01:50:12.313 INFO kablam! Aug 18 01:50:12.313 INFO kablam! build script failed, must exit now', /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773:5 Aug 18 01:50:12.313 INFO kablam! stack backtrace: Aug 18 01:50:12.313 INFO kablam! 0: 0x565537efa7ee - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::hee70e4814fe040ce Aug 18 01:50:12.313 INFO kablam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Aug 18 01:50:12.313 INFO kablam! 1: 0x565537eea416 - std::sys_common::backtrace::print::hd5d4c7080d4c6668 Aug 18 01:50:12.313 INFO kablam! at libstd/sys_common/backtrace.rs:71 Aug 18 01:50:12.313 INFO kablam! at libstd/sys_common/backtrace.rs:59 Aug 18 01:50:12.313 INFO kablam! 2: 0x565537ee8cdd - std::panicking::default_hook::{{closure}}::hf0861fbb75eeb626 Aug 18 01:50:12.313 INFO kablam! at libstd/panicking.rs:211 Aug 18 01:50:12.313 INFO kablam! 3: 0x565537ee8a50 - std::panicking::default_hook::h8fcd9d1d326500d7 Aug 18 01:50:12.313 INFO kablam! at libstd/panicking.rs:227 Aug 18 01:50:12.313 INFO kablam! 4: 0x565537ee92ec - std::panicking::rust_panic_with_hook::h288cacdc0047ca11 Aug 18 01:50:12.313 INFO kablam! at libstd/panicking.rs:475 Aug 18 01:50:12.313 INFO kablam! 5: 0x565537ee8ee9 - std::panicking::continue_panic_fmt::h4fd79658508ba4d2 Aug 18 01:50:12.313 INFO kablam! at libstd/panicking.rs:390 Aug 18 01:50:12.313 INFO kablam! 6: 0x565537ee8e4d - std::panicking::begin_panic_fmt::h1e26cb66ff2ac56e Aug 18 01:50:12.314 INFO kablam! at libstd/panicking.rs:345 Aug 18 01:50:12.314 INFO kablam! 7: 0x565537e8bdf1 - cmake::fail::h6800e07895238142 Aug 18 01:50:12.314 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:773 Aug 18 01:50:12.314 INFO kablam! 8: 0x565537e8b730 - cmake::run::haef01f425ed23ba5 Aug 18 01:50:12.314 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:754 Aug 18 01:50:12.314 INFO kablam! 9: 0x565537e872be - cmake::Config::build::h5fe5eccfc92c2e6e Aug 18 01:50:12.314 INFO kablam! at /cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.33/src/lib.rs:606 Aug 18 01:50:12.314 INFO kablam! 10: 0x565537e83425 - build_script_build::main::h322fde6527e0515b Aug 18 01:50:12.314 INFO kablam! at /source/build.rs:18 Aug 18 01:50:12.314 INFO kablam! 11: 0x565537e843ef - std::rt::lang_start::{{closure}}::hc153f8c2f27eac0b Aug 18 01:50:12.314 INFO kablam! at /checkout/src/libstd/rt.rs:74 Aug 18 01:50:12.314 INFO kablam! 12: 0x565537ee8d82 - std::panicking::try::do_call::h7dd2181ad400e896 Aug 18 01:50:12.314 INFO kablam! at libstd/rt.rs:59 Aug 18 01:50:12.314 INFO kablam! at libstd/panicking.rs:310 Aug 18 01:50:12.314 INFO kablam! 13: 0x565537f0c2c9 - __rust_maybe_catch_panic Aug 18 01:50:12.314 INFO kablam! at libpanic_unwind/lib.rs:105 Aug 18 01:50:12.314 INFO kablam! 14: 0x565537ef54f5 - std::rt::lang_start_internal::haca017aa1a7a6e2d Aug 18 01:50:12.314 INFO kablam! at libstd/panicking.rs:289 Aug 18 01:50:12.314 INFO kablam! at libstd/panic.rs:392 Aug 18 01:50:12.314 INFO kablam! at libstd/rt.rs:58 Aug 18 01:50:12.315 INFO kablam! 15: 0x565537e843c7 - std::rt::lang_start::h46e1729f874f8ac4 Aug 18 01:50:12.315 INFO kablam! at /checkout/src/libstd/rt.rs:74 Aug 18 01:50:12.315 INFO kablam! 16: 0x565537e83d69 - main Aug 18 01:50:12.315 INFO kablam! 17: 0x7f68390ba82f - __libc_start_main Aug 18 01:50:12.315 INFO kablam! 18: 0x565537e82a28 - _start Aug 18 01:50:12.315 INFO kablam! 19: 0x0 - Aug 18 01:50:12.315 INFO kablam! Aug 18 01:50:12.315 INFO kablam! su: No module specific data is present Aug 18 01:50:12.740 INFO running `"docker" "rm" "-f" "60fa8efd82d26cc1e41000d910c4c9b6a0e7eb0d4b31542a293ece491870afe2"` Aug 18 01:50:12.893 INFO blam! 60fa8efd82d26cc1e41000d910c4c9b6a0e7eb0d4b31542a293ece491870afe2