Jul 12 13:17:51.137 INFO checking bio-0.15.0 against try#d39a6f7eddafd45dcc60e99001b8cd08c2bd3255 for pr-52234 Jul 12 13:17:51.137 INFO running: cargo +d39a6f7eddafd45dcc60e99001b8cd08c2bd3255-alt check --frozen --all --all-targets Jul 12 13:17:51.137 INFO creating container for: cargo +d39a6f7eddafd45dcc60e99001b8cd08c2bd3255-alt check --frozen --all --all-targets Jul 12 13:17:51.137 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-1/pr-52234/try#d39a6f7eddafd45dcc60e99001b8cd08c2bd3255:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-52234/worker-1/try#d39a6f7eddafd45dcc60e99001b8cd08c2bd3255:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +d39a6f7eddafd45dcc60e99001b8cd08c2bd3255-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "crater"` Jul 12 13:17:51.479 INFO blam! 5a746dfca18f3e37fec88be4f2756ff7c76b9167b689fd59c7decd5ac7893d58 Jul 12 13:17:51.480 INFO running `"docker" "start" "-a" "5a746dfca18f3e37fec88be4f2756ff7c76b9167b689fd59c7decd5ac7893d58"` Jul 12 13:17:52.772 INFO kablam! Compiling ndarray v0.9.1 Jul 12 13:17:52.778 INFO kablam! Checking csv-core v0.1.4 Jul 12 13:17:52.782 INFO kablam! Checking vec_map v0.8.1 Jul 12 13:17:52.785 INFO kablam! Checking multimap v0.4.0 Jul 12 13:17:56.133 INFO kablam! Checking csv v1.0.0 Jul 12 13:18:12.199 INFO kablam! Checking bio v0.15.0 (file:///source) Jul 12 13:18:16.658 INFO kablam! warning: doc comment not used by rustdoc Jul 12 13:18:16.658 INFO kablam! --> src/stats/pairhmm.rs:44:13 Jul 12 13:18:16.658 INFO kablam! | Jul 12 13:18:16.658 INFO kablam! 44 | /// For global alignment, this has to return 0.0. Jul 12 13:18:16.658 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:16.658 INFO kablam! | Jul 12 13:18:16.658 INFO kablam! = note: #[warn(unused_doc_comments)] on by default Jul 12 13:18:16.658 INFO kablam! Jul 12 13:18:16.810 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:16.810 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:16.810 INFO kablam! | Jul 12 13:18:16.810 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:16.810 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:16.810 INFO kablam! | Jul 12 13:18:16.811 INFO kablam! = note: #[warn(deprecated)] on by default Jul 12 13:18:16.811 INFO kablam! Jul 12 13:18:16.812 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:16.812 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:16.812 INFO kablam! | Jul 12 13:18:16.812 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:16.812 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:16.812 INFO kablam! Jul 12 13:18:17.933 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:17.933 INFO kablam! --> src/data_structures/interval_tree.rs:423:21 Jul 12 13:18:17.933 INFO kablam! | Jul 12 13:18:17.933 INFO kablam! 423 | tree.insert((start..end), name); Jul 12 13:18:17.933 INFO kablam! | ^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.933 INFO kablam! | Jul 12 13:18:17.933 INFO kablam! = note: #[warn(unused_parens)] on by default Jul 12 13:18:17.933 INFO kablam! Jul 12 13:18:17.934 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:17.934 INFO kablam! --> src/data_structures/interval_tree.rs:465:21 Jul 12 13:18:17.934 INFO kablam! | Jul 12 13:18:17.934 INFO kablam! 465 | tree.insert((50..51), "50:51".to_string()); Jul 12 13:18:17.934 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.934 INFO kablam! Jul 12 13:18:17.934 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.934 INFO kablam! --> src/data_structures/interval_tree.rs:466:33 Jul 12 13:18:17.934 INFO kablam! | Jul 12 13:18:17.934 INFO kablam! 466 | assert_not_found(&tree, (49..50)); Jul 12 13:18:17.934 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.934 INFO kablam! Jul 12 13:18:17.934 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.934 INFO kablam! --> src/data_structures/interval_tree.rs:467:37 Jul 12 13:18:17.934 INFO kablam! | Jul 12 13:18:17.935 INFO kablam! 467 | assert_intersections(&tree, (49..55), vec![(50..51)]); Jul 12 13:18:17.935 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.935 INFO kablam! Jul 12 13:18:17.935 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.935 INFO kablam! --> src/data_structures/interval_tree.rs:468:33 Jul 12 13:18:17.935 INFO kablam! | Jul 12 13:18:17.935 INFO kablam! 468 | assert_not_found(&tree, (51..55)); Jul 12 13:18:17.935 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.935 INFO kablam! Jul 12 13:18:17.935 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.935 INFO kablam! --> src/data_structures/interval_tree.rs:469:33 Jul 12 13:18:17.935 INFO kablam! | Jul 12 13:18:17.935 INFO kablam! 469 | assert_not_found(&tree, (52..55)); Jul 12 13:18:17.935 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.935 INFO kablam! Jul 12 13:18:17.935 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.935 INFO kablam! --> src/data_structures/interval_tree.rs:470:33 Jul 12 13:18:17.936 INFO kablam! | Jul 12 13:18:17.936 INFO kablam! 470 | assert_not_found(&tree, (40..45)); Jul 12 13:18:17.936 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.936 INFO kablam! Jul 12 13:18:17.936 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.936 INFO kablam! --> src/data_structures/interval_tree.rs:472:37 Jul 12 13:18:17.936 INFO kablam! | Jul 12 13:18:17.936 INFO kablam! 472 | assert_intersections(&tree, (80..83), vec![(80..81)]); Jul 12 13:18:17.936 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.936 INFO kablam! Jul 12 13:18:17.936 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.936 INFO kablam! --> src/data_structures/interval_tree.rs:473:37 Jul 12 13:18:17.936 INFO kablam! | Jul 12 13:18:17.936 INFO kablam! 473 | assert_intersections(&tree, (1..100), vec![(50..51), (80..81)]); Jul 12 13:18:17.936 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.936 INFO kablam! Jul 12 13:18:17.936 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.936 INFO kablam! --> src/data_structures/interval_tree.rs:474:33 Jul 12 13:18:17.936 INFO kablam! | Jul 12 13:18:17.936 INFO kablam! 474 | assert_not_found(&tree, (82..83)); Jul 12 13:18:17.937 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.937 INFO kablam! Jul 12 13:18:17.937 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.937 INFO kablam! --> src/data_structures/interval_tree.rs:476:37 Jul 12 13:18:17.937 INFO kablam! | Jul 12 13:18:17.937 INFO kablam! 476 | assert_intersections(&tree, (25..33), vec![(30..35)]); Jul 12 13:18:17.937 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.937 INFO kablam! Jul 12 13:18:17.937 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.937 INFO kablam! --> src/data_structures/interval_tree.rs:477:37 Jul 12 13:18:17.937 INFO kablam! | Jul 12 13:18:17.937 INFO kablam! 477 | assert_intersections(&tree, (1..100), vec![(30..35), (50..51), (80..81)]); Jul 12 13:18:17.937 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.937 INFO kablam! Jul 12 13:18:17.937 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.937 INFO kablam! --> src/data_structures/interval_tree.rs:478:33 Jul 12 13:18:17.938 INFO kablam! | Jul 12 13:18:17.938 INFO kablam! 478 | assert_not_found(&tree, (42..43)); Jul 12 13:18:17.938 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.938 INFO kablam! Jul 12 13:18:17.938 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.938 INFO kablam! --> src/data_structures/interval_tree.rs:479:33 Jul 12 13:18:17.938 INFO kablam! | Jul 12 13:18:17.938 INFO kablam! 479 | assert_not_found(&tree, (35..36)); Jul 12 13:18:17.938 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.938 INFO kablam! Jul 12 13:18:17.938 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.938 INFO kablam! --> src/data_structures/interval_tree.rs:480:33 Jul 12 13:18:17.938 INFO kablam! | Jul 12 13:18:17.939 INFO kablam! 480 | assert_not_found(&tree, (22..29)); Jul 12 13:18:17.939 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.939 INFO kablam! Jul 12 13:18:17.939 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.939 INFO kablam! --> src/data_structures/interval_tree.rs:482:37 Jul 12 13:18:17.939 INFO kablam! | Jul 12 13:18:17.939 INFO kablam! 482 | assert_intersections(&tree, (75..79), vec![(70..77)]); Jul 12 13:18:17.939 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.939 INFO kablam! Jul 12 13:18:17.939 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.939 INFO kablam! --> src/data_structures/interval_tree.rs:484:30 Jul 12 13:18:17.939 INFO kablam! | Jul 12 13:18:17.940 INFO kablam! 484 | (1..100), Jul 12 13:18:17.940 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.940 INFO kablam! Jul 12 13:18:17.940 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.940 INFO kablam! --> src/data_structures/interval_tree.rs:486:33 Jul 12 13:18:17.940 INFO kablam! | Jul 12 13:18:17.941 INFO kablam! 486 | assert_not_found(&tree, (62..68)); Jul 12 13:18:17.941 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.941 INFO kablam! Jul 12 13:18:17.941 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.941 INFO kablam! --> src/data_structures/interval_tree.rs:487:37 Jul 12 13:18:17.941 INFO kablam! | Jul 12 13:18:17.941 INFO kablam! 487 | assert_intersections(&tree, (75..77), vec![(70..77)]); Jul 12 13:18:17.941 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.941 INFO kablam! Jul 12 13:18:17.941 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.942 INFO kablam! --> src/data_structures/interval_tree.rs:488:33 Jul 12 13:18:17.942 INFO kablam! | Jul 12 13:18:17.942 INFO kablam! 488 | assert_not_found(&tree, (78..79)); Jul 12 13:18:17.942 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.942 INFO kablam! Jul 12 13:18:17.942 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.942 INFO kablam! --> src/data_structures/interval_tree.rs:489:37 Jul 12 13:18:17.942 INFO kablam! | Jul 12 13:18:17.942 INFO kablam! 489 | assert_intersections(&tree, (49..51), vec![(50..51)]); Jul 12 13:18:17.942 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.942 INFO kablam! Jul 12 13:18:17.942 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.942 INFO kablam! --> src/data_structures/interval_tree.rs:490:37 Jul 12 13:18:17.942 INFO kablam! | Jul 12 13:18:17.942 INFO kablam! 490 | assert_intersections(&tree, (49..55), vec![(50..51)]); Jul 12 13:18:17.942 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.942 INFO kablam! Jul 12 13:18:17.942 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.942 INFO kablam! --> src/data_structures/interval_tree.rs:491:33 Jul 12 13:18:17.942 INFO kablam! | Jul 12 13:18:17.942 INFO kablam! 491 | assert_not_found(&tree, (51..55)); Jul 12 13:18:17.943 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.943 INFO kablam! Jul 12 13:18:17.943 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.943 INFO kablam! --> src/data_structures/interval_tree.rs:492:33 Jul 12 13:18:17.943 INFO kablam! | Jul 12 13:18:17.943 INFO kablam! 492 | assert_not_found(&tree, (52..55)); Jul 12 13:18:17.943 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.943 INFO kablam! Jul 12 13:18:17.943 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.943 INFO kablam! --> src/data_structures/interval_tree.rs:493:33 Jul 12 13:18:17.943 INFO kablam! | Jul 12 13:18:17.943 INFO kablam! 493 | assert_not_found(&tree, (40..45)); Jul 12 13:18:17.943 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.943 INFO kablam! Jul 12 13:18:17.943 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.943 INFO kablam! --> src/data_structures/interval_tree.rs:503:33 Jul 12 13:18:17.943 INFO kablam! | Jul 12 13:18:17.943 INFO kablam! 503 | assert_not_found(&tree, (112..113)); Jul 12 13:18:17.943 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.943 INFO kablam! Jul 12 13:18:17.943 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.943 INFO kablam! --> src/data_structures/interval_tree.rs:504:33 Jul 12 13:18:17.943 INFO kablam! | Jul 12 13:18:17.944 INFO kablam! 504 | assert_not_found(&tree, (108..109)); Jul 12 13:18:17.944 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.944 INFO kablam! Jul 12 13:18:17.944 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.944 INFO kablam! --> src/data_structures/interval_tree.rs:505:37 Jul 12 13:18:17.944 INFO kablam! | Jul 12 13:18:17.944 INFO kablam! 505 | assert_intersections(&tree, (106..108), vec![(107..108)]); Jul 12 13:18:17.944 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.944 INFO kablam! Jul 12 13:18:17.944 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.944 INFO kablam! --> src/data_structures/interval_tree.rs:507:30 Jul 12 13:18:17.944 INFO kablam! | Jul 12 13:18:17.944 INFO kablam! 507 | (1..100), Jul 12 13:18:17.944 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.944 INFO kablam! Jul 12 13:18:17.944 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.944 INFO kablam! --> src/data_structures/interval_tree.rs:510:30 Jul 12 13:18:17.944 INFO kablam! | Jul 12 13:18:17.944 INFO kablam! 510 | (1..101), Jul 12 13:18:17.944 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.945 INFO kablam! Jul 12 13:18:17.945 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.945 INFO kablam! --> src/data_structures/interval_tree.rs:513:30 Jul 12 13:18:17.945 INFO kablam! | Jul 12 13:18:17.945 INFO kablam! 513 | (1..102), Jul 12 13:18:17.945 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.945 INFO kablam! Jul 12 13:18:17.945 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.945 INFO kablam! --> src/data_structures/interval_tree.rs:516:30 Jul 12 13:18:17.945 INFO kablam! | Jul 12 13:18:17.945 INFO kablam! 516 | (100..200), Jul 12 13:18:17.945 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.945 INFO kablam! Jul 12 13:18:17.945 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.945 INFO kablam! --> src/data_structures/interval_tree.rs:543:41 Jul 12 13:18:17.945 INFO kablam! | Jul 12 13:18:17.945 INFO kablam! 543 | assert_intersections(&tree, (lower_bound..upper_bound), expected_intersections); Jul 12 13:18:17.945 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.946 INFO kablam! Jul 12 13:18:17.946 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:17.946 INFO kablam! --> src/data_structures/interval_tree.rs:550:21 Jul 12 13:18:17.946 INFO kablam! | Jul 12 13:18:17.946 INFO kablam! 550 | tree.insert((10..10), "10:10".to_string()); Jul 12 13:18:17.946 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.946 INFO kablam! Jul 12 13:18:17.946 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.946 INFO kablam! --> src/data_structures/interval_tree.rs:552:33 Jul 12 13:18:17.946 INFO kablam! | Jul 12 13:18:17.946 INFO kablam! 552 | assert_not_found(&tree, (5..15)); Jul 12 13:18:17.946 INFO kablam! | ^^^^^^^ help: remove these parentheses Jul 12 13:18:17.946 INFO kablam! Jul 12 13:18:17.946 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.946 INFO kablam! --> src/data_structures/interval_tree.rs:553:33 Jul 12 13:18:17.946 INFO kablam! | Jul 12 13:18:17.946 INFO kablam! 553 | assert_not_found(&tree, (10..10)); Jul 12 13:18:17.947 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.947 INFO kablam! Jul 12 13:18:17.947 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.947 INFO kablam! --> src/data_structures/interval_tree.rs:556:33 Jul 12 13:18:17.947 INFO kablam! | Jul 12 13:18:17.947 INFO kablam! 556 | assert_not_found(&tree, (55..55)); Jul 12 13:18:17.947 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.947 INFO kablam! Jul 12 13:18:17.977 INFO kablam! warning: doc comment not used by rustdoc Jul 12 13:18:17.977 INFO kablam! --> src/stats/pairhmm.rs:44:13 Jul 12 13:18:17.977 INFO kablam! | Jul 12 13:18:17.977 INFO kablam! 44 | /// For global alignment, this has to return 0.0. Jul 12 13:18:17.977 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:17.977 INFO kablam! | Jul 12 13:18:17.977 INFO kablam! = note: #[warn(unused_doc_comments)] on by default Jul 12 13:18:17.977 INFO kablam! Jul 12 13:18:18.332 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:18.332 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:18.332 INFO kablam! | Jul 12 13:18:18.332 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:18.332 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:18.332 INFO kablam! | Jul 12 13:18:18.333 INFO kablam! = note: #[warn(deprecated)] on by default Jul 12 13:18:18.333 INFO kablam! Jul 12 13:18:18.333 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:18.333 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:18.333 INFO kablam! | Jul 12 13:18:18.333 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:18.333 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:18.333 INFO kablam! Jul 12 13:18:23.909 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:23.909 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:23.909 INFO kablam! | Jul 12 13:18:23.909 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:23.909 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:23.909 INFO kablam! | Jul 12 13:18:23.909 INFO kablam! = note: #[warn(unused_imports)] on by default Jul 12 13:18:23.909 INFO kablam! Jul 12 13:18:23.909 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:23.909 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:23.909 INFO kablam! | Jul 12 13:18:23.909 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:23.909 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:23.909 INFO kablam! Jul 12 13:18:26.230 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:26.230 INFO kablam! --> src/data_structures/interval_tree.rs:293:21 Jul 12 13:18:26.230 INFO kablam! | Jul 12 13:18:26.230 INFO kablam! 293 | let mut right = self.right Jul 12 13:18:26.230 INFO kablam! | ----^^^^^ Jul 12 13:18:26.230 INFO kablam! | | Jul 12 13:18:26.231 INFO kablam! | help: remove this `mut` Jul 12 13:18:26.231 INFO kablam! | Jul 12 13:18:26.231 INFO kablam! = note: #[warn(unused_mut)] on by default Jul 12 13:18:26.231 INFO kablam! Jul 12 13:18:26.231 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:26.231 INFO kablam! --> src/data_structures/interval_tree.rs:305:21 Jul 12 13:18:26.231 INFO kablam! | Jul 12 13:18:26.231 INFO kablam! 305 | let mut left = self.left Jul 12 13:18:26.231 INFO kablam! | ----^^^^ Jul 12 13:18:26.231 INFO kablam! | | Jul 12 13:18:26.231 INFO kablam! | help: remove this `mut` Jul 12 13:18:26.231 INFO kablam! Jul 12 13:18:28.067 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:28.067 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:28.067 INFO kablam! | Jul 12 13:18:28.067 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:28.068 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:28.068 INFO kablam! | Jul 12 13:18:28.068 INFO kablam! = note: #[warn(unused_imports)] on by default Jul 12 13:18:28.068 INFO kablam! Jul 12 13:18:28.068 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:28.068 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:28.068 INFO kablam! | Jul 12 13:18:28.068 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:28.068 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:28.068 INFO kablam! Jul 12 13:18:30.341 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:30.341 INFO kablam! --> src/data_structures/interval_tree.rs:293:21 Jul 12 13:18:30.341 INFO kablam! | Jul 12 13:18:30.341 INFO kablam! 293 | let mut right = self.right Jul 12 13:18:30.341 INFO kablam! | ----^^^^^ Jul 12 13:18:30.341 INFO kablam! | | Jul 12 13:18:30.341 INFO kablam! | help: remove this `mut` Jul 12 13:18:30.341 INFO kablam! | Jul 12 13:18:30.341 INFO kablam! = note: #[warn(unused_mut)] on by default Jul 12 13:18:30.341 INFO kablam! Jul 12 13:18:30.341 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:30.341 INFO kablam! --> src/data_structures/interval_tree.rs:305:21 Jul 12 13:18:30.341 INFO kablam! | Jul 12 13:18:30.341 INFO kablam! 305 | let mut left = self.left Jul 12 13:18:30.341 INFO kablam! | ----^^^^ Jul 12 13:18:30.342 INFO kablam! | | Jul 12 13:18:30.342 INFO kablam! | help: remove this `mut` Jul 12 13:18:30.342 INFO kablam! Jul 12 13:18:36.827 INFO kablam! warning: function is never used: `prob_emit_xy` Jul 12 13:18:36.827 INFO kablam! --> src/stats/pairhmm.rs:227:5 Jul 12 13:18:36.827 INFO kablam! | Jul 12 13:18:36.827 INFO kablam! 227 | fn prob_emit_xy(x: &[u8], y: &[u8], i: usize, j: usize) -> LogProb { Jul 12 13:18:36.827 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:36.827 INFO kablam! | Jul 12 13:18:36.827 INFO kablam! = note: #[warn(dead_code)] on by default Jul 12 13:18:36.827 INFO kablam! Jul 12 13:18:40.304 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:40.304 INFO kablam! --> benches/interval_tree.rs:17:64 Jul 12 13:18:40.304 INFO kablam! | Jul 12 13:18:40.304 INFO kablam! 17 | b.iter(|| test_insert_query(10, &(100_000..200_000), 1000, (105_000..106_000))); Jul 12 13:18:40.304 INFO kablam! | ^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:40.305 INFO kablam! | Jul 12 13:18:40.306 INFO kablam! = note: #[warn(unused_parens)] on by default Jul 12 13:18:40.306 INFO kablam! Jul 12 13:18:40.307 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:40.307 INFO kablam! --> benches/interval_tree.rs:24:62 Jul 12 13:18:40.307 INFO kablam! | Jul 12 13:18:40.307 INFO kablam! 24 | b.iter(|| test_insert_query(10, &(100_000..200_000), 10, (99_995..199_995))); Jul 12 13:18:40.307 INFO kablam! | ^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:40.308 INFO kablam! Jul 12 13:18:40.308 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:40.308 INFO kablam! --> benches/interval_tree.rs:35:21 Jul 12 13:18:40.308 INFO kablam! | Jul 12 13:18:40.308 INFO kablam! 35 | tree.insert((i..i + insert_size), (i..i + insert_size)); Jul 12 13:18:40.308 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:40.309 INFO kablam! Jul 12 13:18:40.310 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:40.310 INFO kablam! --> benches/interval_tree.rs:35:43 Jul 12 13:18:40.310 INFO kablam! | Jul 12 13:18:40.310 INFO kablam! 35 | tree.insert((i..i + insert_size), (i..i + insert_size)); Jul 12 13:18:40.310 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:40.310 INFO kablam! Jul 12 13:18:40.311 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:40.311 INFO kablam! --> benches/interval_tree.rs:46:37 Jul 12 13:18:40.311 INFO kablam! | Jul 12 13:18:40.311 INFO kablam! 46 | assert_intersections(&tree, (lower_bound..upper_bound), &expected_intersections); Jul 12 13:18:40.311 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:40.312 INFO kablam! Jul 12 13:18:42.108 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:42.108 INFO kablam! --> benches/pattern_matching.rs:231:16 Jul 12 13:18:42.108 INFO kablam! | Jul 12 13:18:42.108 INFO kablam! 231 | shiftand.find_all(TEXT.iter()).collect::>(); Jul 12 13:18:42.108 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:42.108 INFO kablam! | Jul 12 13:18:42.108 INFO kablam! = note: #[warn(unused_must_use)] on by default Jul 12 13:18:42.108 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:42.108 INFO kablam! Jul 12 13:18:42.108 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:42.108 INFO kablam! --> benches/pattern_matching.rs:239:16 Jul 12 13:18:42.108 INFO kablam! | Jul 12 13:18:42.108 INFO kablam! 239 | bndm.find_all(TEXT).collect::>(); Jul 12 13:18:42.108 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:42.108 INFO kablam! | Jul 12 13:18:42.109 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:42.109 INFO kablam! Jul 12 13:18:42.109 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:42.109 INFO kablam! --> benches/pattern_matching.rs:247:16 Jul 12 13:18:42.109 INFO kablam! | Jul 12 13:18:42.109 INFO kablam! 247 | bom.find_all(TEXT).collect::>(); Jul 12 13:18:42.109 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:42.109 INFO kablam! | Jul 12 13:18:42.109 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:42.109 INFO kablam! Jul 12 13:18:42.109 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:42.109 INFO kablam! --> benches/pattern_matching.rs:255:16 Jul 12 13:18:42.109 INFO kablam! | Jul 12 13:18:42.109 INFO kablam! 255 | horspool.find_all(TEXT).collect::>(); Jul 12 13:18:42.109 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:42.109 INFO kablam! | Jul 12 13:18:42.109 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:42.109 INFO kablam! Jul 12 13:18:42.109 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:42.109 INFO kablam! --> benches/pattern_matching.rs:263:16 Jul 12 13:18:42.109 INFO kablam! | Jul 12 13:18:42.109 INFO kablam! 263 | kmp.find_all(TEXT.iter()).collect::>(); Jul 12 13:18:42.109 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:42.110 INFO kablam! | Jul 12 13:18:42.110 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:42.110 INFO kablam! Jul 12 13:18:42.462 INFO kablam! Finished dev [unoptimized + debuginfo] target(s) in 49.89s Jul 12 13:18:42.487 INFO kablam! su: No module specific data is present Jul 12 13:18:42.982 INFO running `"docker" "rm" "-f" "5a746dfca18f3e37fec88be4f2756ff7c76b9167b689fd59c7decd5ac7893d58"` Jul 12 13:18:43.166 INFO blam! 5a746dfca18f3e37fec88be4f2756ff7c76b9167b689fd59c7decd5ac7893d58