Jul 12 13:17:51.307 INFO checking bio-0.15.0 against master#ae5b629efd79de78e6ba7ef493c32857bd7f9cf9 for pr-52234 Jul 12 13:17:51.307 INFO running: cargo +ae5b629efd79de78e6ba7ef493c32857bd7f9cf9-alt check --frozen --all --all-targets Jul 12 13:17:51.307 INFO creating container for: cargo +ae5b629efd79de78e6ba7ef493c32857bd7f9cf9-alt check --frozen --all --all-targets Jul 12 13:17:51.308 INFO running `"docker" "create" "-v" "/home/ec2-user/crater/./work/local/test-source/worker-2/pr-52234/master#ae5b629efd79de78e6ba7ef493c32857bd7f9cf9:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/pr-52234/worker-2/master#ae5b629efd79de78e6ba7ef493c32857bd7f9cf9:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +ae5b629efd79de78e6ba7ef493c32857bd7f9cf9-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "crater"` Jul 12 13:17:51.555 INFO blam! 8c152e45f867489879fd7110fd43836a27295f4e87a3c4329abd08ba0cf31a1c Jul 12 13:17:51.562 INFO running `"docker" "start" "-a" "8c152e45f867489879fd7110fd43836a27295f4e87a3c4329abd08ba0cf31a1c"` Jul 12 13:17:52.876 INFO kablam! Compiling ndarray v0.9.1 Jul 12 13:17:52.880 INFO kablam! Compiling newtype_derive v0.1.6 Jul 12 13:17:52.883 INFO kablam! Checking csv-core v0.1.4 Jul 12 13:17:52.889 INFO kablam! Checking multimap v0.4.0 Jul 12 13:17:52.891 INFO kablam! Checking vec_map v0.8.1 Jul 12 13:17:56.654 INFO kablam! Checking csv v1.0.0 Jul 12 13:18:12.156 INFO kablam! Checking bio v0.15.0 (file:///source) Jul 12 13:18:16.380 INFO kablam! warning: doc comment not used by rustdoc Jul 12 13:18:16.380 INFO kablam! --> src/stats/pairhmm.rs:44:13 Jul 12 13:18:16.380 INFO kablam! | Jul 12 13:18:16.380 INFO kablam! 44 | /// For global alignment, this has to return 0.0. Jul 12 13:18:16.380 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:16.380 INFO kablam! | Jul 12 13:18:16.380 INFO kablam! = note: #[warn(unused_doc_comments)] on by default Jul 12 13:18:16.380 INFO kablam! Jul 12 13:18:16.579 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:16.579 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:16.579 INFO kablam! | Jul 12 13:18:16.579 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:16.579 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:16.579 INFO kablam! | Jul 12 13:18:16.579 INFO kablam! = note: #[warn(deprecated)] on by default Jul 12 13:18:16.579 INFO kablam! Jul 12 13:18:16.580 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:16.580 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:16.580 INFO kablam! | Jul 12 13:18:16.580 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:16.580 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:16.580 INFO kablam! Jul 12 13:18:17.595 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:17.595 INFO kablam! --> src/data_structures/interval_tree.rs:423:21 Jul 12 13:18:17.595 INFO kablam! | Jul 12 13:18:17.595 INFO kablam! 423 | tree.insert((start..end), name); Jul 12 13:18:17.595 INFO kablam! | ^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.595 INFO kablam! | Jul 12 13:18:17.595 INFO kablam! = note: #[warn(unused_parens)] on by default Jul 12 13:18:17.595 INFO kablam! Jul 12 13:18:17.595 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:17.596 INFO kablam! --> src/data_structures/interval_tree.rs:465:21 Jul 12 13:18:17.596 INFO kablam! | Jul 12 13:18:17.596 INFO kablam! 465 | tree.insert((50..51), "50:51".to_string()); Jul 12 13:18:17.596 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.596 INFO kablam! Jul 12 13:18:17.596 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.596 INFO kablam! --> src/data_structures/interval_tree.rs:466:33 Jul 12 13:18:17.596 INFO kablam! | Jul 12 13:18:17.596 INFO kablam! 466 | assert_not_found(&tree, (49..50)); Jul 12 13:18:17.596 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.596 INFO kablam! Jul 12 13:18:17.596 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.596 INFO kablam! --> src/data_structures/interval_tree.rs:467:37 Jul 12 13:18:17.596 INFO kablam! | Jul 12 13:18:17.596 INFO kablam! 467 | assert_intersections(&tree, (49..55), vec![(50..51)]); Jul 12 13:18:17.596 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.596 INFO kablam! Jul 12 13:18:17.597 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.597 INFO kablam! --> src/data_structures/interval_tree.rs:468:33 Jul 12 13:18:17.597 INFO kablam! | Jul 12 13:18:17.597 INFO kablam! 468 | assert_not_found(&tree, (51..55)); Jul 12 13:18:17.597 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.597 INFO kablam! Jul 12 13:18:17.597 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.597 INFO kablam! --> src/data_structures/interval_tree.rs:469:33 Jul 12 13:18:17.597 INFO kablam! | Jul 12 13:18:17.597 INFO kablam! 469 | assert_not_found(&tree, (52..55)); Jul 12 13:18:17.597 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.597 INFO kablam! Jul 12 13:18:17.598 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.598 INFO kablam! --> src/data_structures/interval_tree.rs:470:33 Jul 12 13:18:17.598 INFO kablam! | Jul 12 13:18:17.598 INFO kablam! 470 | assert_not_found(&tree, (40..45)); Jul 12 13:18:17.598 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.598 INFO kablam! Jul 12 13:18:17.598 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.598 INFO kablam! --> src/data_structures/interval_tree.rs:472:37 Jul 12 13:18:17.598 INFO kablam! | Jul 12 13:18:17.598 INFO kablam! 472 | assert_intersections(&tree, (80..83), vec![(80..81)]); Jul 12 13:18:17.598 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.599 INFO kablam! Jul 12 13:18:17.599 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.599 INFO kablam! --> src/data_structures/interval_tree.rs:473:37 Jul 12 13:18:17.599 INFO kablam! | Jul 12 13:18:17.599 INFO kablam! 473 | assert_intersections(&tree, (1..100), vec![(50..51), (80..81)]); Jul 12 13:18:17.599 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.599 INFO kablam! Jul 12 13:18:17.599 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.599 INFO kablam! --> src/data_structures/interval_tree.rs:474:33 Jul 12 13:18:17.599 INFO kablam! | Jul 12 13:18:17.599 INFO kablam! 474 | assert_not_found(&tree, (82..83)); Jul 12 13:18:17.599 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.599 INFO kablam! Jul 12 13:18:17.600 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.600 INFO kablam! --> src/data_structures/interval_tree.rs:476:37 Jul 12 13:18:17.600 INFO kablam! | Jul 12 13:18:17.600 INFO kablam! 476 | assert_intersections(&tree, (25..33), vec![(30..35)]); Jul 12 13:18:17.600 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.600 INFO kablam! Jul 12 13:18:17.600 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.600 INFO kablam! --> src/data_structures/interval_tree.rs:477:37 Jul 12 13:18:17.600 INFO kablam! | Jul 12 13:18:17.600 INFO kablam! 477 | assert_intersections(&tree, (1..100), vec![(30..35), (50..51), (80..81)]); Jul 12 13:18:17.600 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.600 INFO kablam! Jul 12 13:18:17.601 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.601 INFO kablam! --> src/data_structures/interval_tree.rs:478:33 Jul 12 13:18:17.601 INFO kablam! | Jul 12 13:18:17.601 INFO kablam! 478 | assert_not_found(&tree, (42..43)); Jul 12 13:18:17.601 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.601 INFO kablam! Jul 12 13:18:17.602 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.602 INFO kablam! --> src/data_structures/interval_tree.rs:479:33 Jul 12 13:18:17.602 INFO kablam! | Jul 12 13:18:17.602 INFO kablam! 479 | assert_not_found(&tree, (35..36)); Jul 12 13:18:17.602 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.602 INFO kablam! Jul 12 13:18:17.603 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.603 INFO kablam! --> src/data_structures/interval_tree.rs:480:33 Jul 12 13:18:17.603 INFO kablam! | Jul 12 13:18:17.603 INFO kablam! 480 | assert_not_found(&tree, (22..29)); Jul 12 13:18:17.603 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.603 INFO kablam! Jul 12 13:18:17.604 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.604 INFO kablam! --> src/data_structures/interval_tree.rs:482:37 Jul 12 13:18:17.604 INFO kablam! | Jul 12 13:18:17.604 INFO kablam! 482 | assert_intersections(&tree, (75..79), vec![(70..77)]); Jul 12 13:18:17.604 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.604 INFO kablam! Jul 12 13:18:17.605 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.605 INFO kablam! --> src/data_structures/interval_tree.rs:484:30 Jul 12 13:18:17.605 INFO kablam! | Jul 12 13:18:17.605 INFO kablam! 484 | (1..100), Jul 12 13:18:17.605 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.605 INFO kablam! Jul 12 13:18:17.606 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.606 INFO kablam! --> src/data_structures/interval_tree.rs:486:33 Jul 12 13:18:17.606 INFO kablam! | Jul 12 13:18:17.606 INFO kablam! 486 | assert_not_found(&tree, (62..68)); Jul 12 13:18:17.606 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.607 INFO kablam! Jul 12 13:18:17.607 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.607 INFO kablam! --> src/data_structures/interval_tree.rs:487:37 Jul 12 13:18:17.607 INFO kablam! | Jul 12 13:18:17.607 INFO kablam! 487 | assert_intersections(&tree, (75..77), vec![(70..77)]); Jul 12 13:18:17.607 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.608 INFO kablam! Jul 12 13:18:17.608 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.608 INFO kablam! --> src/data_structures/interval_tree.rs:488:33 Jul 12 13:18:17.608 INFO kablam! | Jul 12 13:18:17.608 INFO kablam! 488 | assert_not_found(&tree, (78..79)); Jul 12 13:18:17.608 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.609 INFO kablam! Jul 12 13:18:17.609 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.609 INFO kablam! --> src/data_structures/interval_tree.rs:489:37 Jul 12 13:18:17.609 INFO kablam! | Jul 12 13:18:17.609 INFO kablam! 489 | assert_intersections(&tree, (49..51), vec![(50..51)]); Jul 12 13:18:17.609 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.610 INFO kablam! Jul 12 13:18:17.611 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.611 INFO kablam! --> src/data_structures/interval_tree.rs:490:37 Jul 12 13:18:17.611 INFO kablam! | Jul 12 13:18:17.611 INFO kablam! 490 | assert_intersections(&tree, (49..55), vec![(50..51)]); Jul 12 13:18:17.611 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.611 INFO kablam! Jul 12 13:18:17.612 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.612 INFO kablam! --> src/data_structures/interval_tree.rs:491:33 Jul 12 13:18:17.612 INFO kablam! | Jul 12 13:18:17.612 INFO kablam! 491 | assert_not_found(&tree, (51..55)); Jul 12 13:18:17.612 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.613 INFO kablam! Jul 12 13:18:17.613 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.613 INFO kablam! --> src/data_structures/interval_tree.rs:492:33 Jul 12 13:18:17.613 INFO kablam! | Jul 12 13:18:17.613 INFO kablam! 492 | assert_not_found(&tree, (52..55)); Jul 12 13:18:17.613 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.614 INFO kablam! Jul 12 13:18:17.614 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.614 INFO kablam! --> src/data_structures/interval_tree.rs:493:33 Jul 12 13:18:17.614 INFO kablam! | Jul 12 13:18:17.615 INFO kablam! 493 | assert_not_found(&tree, (40..45)); Jul 12 13:18:17.615 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.616 INFO kablam! Jul 12 13:18:17.616 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.616 INFO kablam! --> src/data_structures/interval_tree.rs:503:33 Jul 12 13:18:17.616 INFO kablam! | Jul 12 13:18:17.617 INFO kablam! 503 | assert_not_found(&tree, (112..113)); Jul 12 13:18:17.617 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.617 INFO kablam! Jul 12 13:18:17.618 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.618 INFO kablam! --> src/data_structures/interval_tree.rs:504:33 Jul 12 13:18:17.618 INFO kablam! | Jul 12 13:18:17.618 INFO kablam! 504 | assert_not_found(&tree, (108..109)); Jul 12 13:18:17.618 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.618 INFO kablam! Jul 12 13:18:17.619 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.619 INFO kablam! --> src/data_structures/interval_tree.rs:505:37 Jul 12 13:18:17.619 INFO kablam! | Jul 12 13:18:17.619 INFO kablam! 505 | assert_intersections(&tree, (106..108), vec![(107..108)]); Jul 12 13:18:17.619 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.620 INFO kablam! Jul 12 13:18:17.620 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.620 INFO kablam! --> src/data_structures/interval_tree.rs:507:30 Jul 12 13:18:17.620 INFO kablam! | Jul 12 13:18:17.620 INFO kablam! 507 | (1..100), Jul 12 13:18:17.620 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.621 INFO kablam! Jul 12 13:18:17.622 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.622 INFO kablam! --> src/data_structures/interval_tree.rs:510:30 Jul 12 13:18:17.622 INFO kablam! | Jul 12 13:18:17.622 INFO kablam! 510 | (1..101), Jul 12 13:18:17.622 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.622 INFO kablam! Jul 12 13:18:17.623 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.623 INFO kablam! --> src/data_structures/interval_tree.rs:513:30 Jul 12 13:18:17.623 INFO kablam! | Jul 12 13:18:17.623 INFO kablam! 513 | (1..102), Jul 12 13:18:17.623 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.624 INFO kablam! Jul 12 13:18:17.624 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.624 INFO kablam! --> src/data_structures/interval_tree.rs:516:30 Jul 12 13:18:17.624 INFO kablam! | Jul 12 13:18:17.624 INFO kablam! 516 | (100..200), Jul 12 13:18:17.624 INFO kablam! | ^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.625 INFO kablam! Jul 12 13:18:17.626 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.626 INFO kablam! --> src/data_structures/interval_tree.rs:543:41 Jul 12 13:18:17.626 INFO kablam! | Jul 12 13:18:17.626 INFO kablam! 543 | assert_intersections(&tree, (lower_bound..upper_bound), expected_intersections); Jul 12 13:18:17.626 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.626 INFO kablam! Jul 12 13:18:17.627 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:17.627 INFO kablam! --> src/data_structures/interval_tree.rs:550:21 Jul 12 13:18:17.627 INFO kablam! | Jul 12 13:18:17.627 INFO kablam! 550 | tree.insert((10..10), "10:10".to_string()); Jul 12 13:18:17.627 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.628 INFO kablam! Jul 12 13:18:17.628 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.628 INFO kablam! --> src/data_structures/interval_tree.rs:552:33 Jul 12 13:18:17.628 INFO kablam! | Jul 12 13:18:17.628 INFO kablam! 552 | assert_not_found(&tree, (5..15)); Jul 12 13:18:17.628 INFO kablam! | ^^^^^^^ help: remove these parentheses Jul 12 13:18:17.629 INFO kablam! Jul 12 13:18:17.629 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.629 INFO kablam! --> src/data_structures/interval_tree.rs:553:33 Jul 12 13:18:17.629 INFO kablam! | Jul 12 13:18:17.630 INFO kablam! 553 | assert_not_found(&tree, (10..10)); Jul 12 13:18:17.630 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.630 INFO kablam! Jul 12 13:18:17.631 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:17.631 INFO kablam! --> src/data_structures/interval_tree.rs:556:33 Jul 12 13:18:17.631 INFO kablam! | Jul 12 13:18:17.631 INFO kablam! 556 | assert_not_found(&tree, (55..55)); Jul 12 13:18:17.631 INFO kablam! | ^^^^^^^^ help: remove these parentheses Jul 12 13:18:17.631 INFO kablam! Jul 12 13:18:17.680 INFO kablam! warning: doc comment not used by rustdoc Jul 12 13:18:17.680 INFO kablam! --> src/stats/pairhmm.rs:44:13 Jul 12 13:18:17.680 INFO kablam! | Jul 12 13:18:17.680 INFO kablam! 44 | /// For global alignment, this has to return 0.0. Jul 12 13:18:17.680 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:17.681 INFO kablam! | Jul 12 13:18:17.681 INFO kablam! = note: #[warn(unused_doc_comments)] on by default Jul 12 13:18:17.682 INFO kablam! Jul 12 13:18:17.986 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:17.986 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:17.986 INFO kablam! | Jul 12 13:18:17.987 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:17.987 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:17.987 INFO kablam! | Jul 12 13:18:17.987 INFO kablam! = note: #[warn(deprecated)] on by default Jul 12 13:18:17.987 INFO kablam! Jul 12 13:18:17.988 INFO kablam! warning: use of deprecated item 'std::ascii::AsciiExt': use inherent methods instead Jul 12 13:18:17.988 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:17.988 INFO kablam! | Jul 12 13:18:17.988 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:17.988 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:17.988 INFO kablam! Jul 12 13:18:23.991 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:23.992 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:23.992 INFO kablam! | Jul 12 13:18:23.992 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:23.992 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:23.992 INFO kablam! | Jul 12 13:18:23.992 INFO kablam! = note: #[warn(unused_imports)] on by default Jul 12 13:18:23.992 INFO kablam! Jul 12 13:18:23.992 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:23.992 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:23.992 INFO kablam! | Jul 12 13:18:23.993 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:23.993 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:23.993 INFO kablam! Jul 12 13:18:25.749 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:25.749 INFO kablam! --> src/data_structures/interval_tree.rs:293:21 Jul 12 13:18:25.749 INFO kablam! | Jul 12 13:18:25.749 INFO kablam! 293 | let mut right = self.right Jul 12 13:18:25.749 INFO kablam! | ----^^^^^ Jul 12 13:18:25.749 INFO kablam! | | Jul 12 13:18:25.749 INFO kablam! | help: remove this `mut` Jul 12 13:18:25.750 INFO kablam! | Jul 12 13:18:25.750 INFO kablam! = note: #[warn(unused_mut)] on by default Jul 12 13:18:25.750 INFO kablam! Jul 12 13:18:25.750 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:25.750 INFO kablam! --> src/data_structures/interval_tree.rs:305:21 Jul 12 13:18:25.750 INFO kablam! | Jul 12 13:18:25.750 INFO kablam! 305 | let mut left = self.left Jul 12 13:18:25.750 INFO kablam! | ----^^^^ Jul 12 13:18:25.750 INFO kablam! | | Jul 12 13:18:25.750 INFO kablam! | help: remove this `mut` Jul 12 13:18:25.750 INFO kablam! Jul 12 13:18:28.236 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:28.236 INFO kablam! --> src/io/fastq.rs:18:5 Jul 12 13:18:28.237 INFO kablam! | Jul 12 13:18:28.237 INFO kablam! 18 | use std::ascii::AsciiExt; Jul 12 13:18:28.237 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:28.237 INFO kablam! | Jul 12 13:18:28.237 INFO kablam! = note: #[warn(unused_imports)] on by default Jul 12 13:18:28.237 INFO kablam! Jul 12 13:18:28.237 INFO kablam! warning: unused import: `std::ascii::AsciiExt` Jul 12 13:18:28.237 INFO kablam! --> src/io/fasta.rs:20:5 Jul 12 13:18:28.237 INFO kablam! | Jul 12 13:18:28.237 INFO kablam! 20 | use std::ascii::AsciiExt; Jul 12 13:18:28.237 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:28.237 INFO kablam! Jul 12 13:18:30.460 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:30.460 INFO kablam! --> src/data_structures/interval_tree.rs:293:21 Jul 12 13:18:30.460 INFO kablam! | Jul 12 13:18:30.460 INFO kablam! 293 | let mut right = self.right Jul 12 13:18:30.460 INFO kablam! | ----^^^^^ Jul 12 13:18:30.460 INFO kablam! | | Jul 12 13:18:30.460 INFO kablam! | help: remove this `mut` Jul 12 13:18:30.462 INFO kablam! | Jul 12 13:18:30.462 INFO kablam! = note: #[warn(unused_mut)] on by default Jul 12 13:18:30.462 INFO kablam! Jul 12 13:18:30.463 INFO kablam! warning: variable does not need to be mutable Jul 12 13:18:30.463 INFO kablam! --> src/data_structures/interval_tree.rs:305:21 Jul 12 13:18:30.463 INFO kablam! | Jul 12 13:18:30.463 INFO kablam! 305 | let mut left = self.left Jul 12 13:18:30.463 INFO kablam! | ----^^^^ Jul 12 13:18:30.463 INFO kablam! | | Jul 12 13:18:30.463 INFO kablam! | help: remove this `mut` Jul 12 13:18:30.463 INFO kablam! Jul 12 13:18:38.565 INFO kablam! warning: function is never used: `prob_emit_xy` Jul 12 13:18:38.565 INFO kablam! --> src/stats/pairhmm.rs:227:5 Jul 12 13:18:38.565 INFO kablam! | Jul 12 13:18:38.565 INFO kablam! 227 | fn prob_emit_xy(x: &[u8], y: &[u8], i: usize, j: usize) -> LogProb { Jul 12 13:18:38.565 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:38.571 INFO kablam! | Jul 12 13:18:38.571 INFO kablam! = note: #[warn(dead_code)] on by default Jul 12 13:18:38.571 INFO kablam! Jul 12 13:18:41.027 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:41.027 INFO kablam! --> benches/pattern_matching.rs:231:16 Jul 12 13:18:41.027 INFO kablam! | Jul 12 13:18:41.027 INFO kablam! 231 | shiftand.find_all(TEXT.iter()).collect::>(); Jul 12 13:18:41.027 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:41.027 INFO kablam! | Jul 12 13:18:41.028 INFO kablam! = note: #[warn(unused_must_use)] on by default Jul 12 13:18:41.028 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:41.028 INFO kablam! Jul 12 13:18:41.028 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:41.028 INFO kablam! --> benches/pattern_matching.rs:239:16 Jul 12 13:18:41.028 INFO kablam! | Jul 12 13:18:41.028 INFO kablam! 239 | bndm.find_all(TEXT).collect::>(); Jul 12 13:18:41.028 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:41.028 INFO kablam! | Jul 12 13:18:41.028 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:41.028 INFO kablam! Jul 12 13:18:41.029 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:41.029 INFO kablam! --> benches/pattern_matching.rs:247:16 Jul 12 13:18:41.029 INFO kablam! | Jul 12 13:18:41.029 INFO kablam! 247 | bom.find_all(TEXT).collect::>(); Jul 12 13:18:41.029 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:41.029 INFO kablam! | Jul 12 13:18:41.029 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:41.029 INFO kablam! Jul 12 13:18:41.030 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:41.030 INFO kablam! --> benches/pattern_matching.rs:255:16 Jul 12 13:18:41.030 INFO kablam! | Jul 12 13:18:41.030 INFO kablam! 255 | horspool.find_all(TEXT).collect::>(); Jul 12 13:18:41.030 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:41.030 INFO kablam! | Jul 12 13:18:41.030 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:41.030 INFO kablam! Jul 12 13:18:41.030 INFO kablam! warning: unused return value of `std::iter::Iterator::collect` which must be used Jul 12 13:18:41.030 INFO kablam! --> benches/pattern_matching.rs:263:16 Jul 12 13:18:41.030 INFO kablam! | Jul 12 13:18:41.030 INFO kablam! 263 | kmp.find_all(TEXT.iter()).collect::>(); Jul 12 13:18:41.030 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ Jul 12 13:18:41.030 INFO kablam! | Jul 12 13:18:41.030 INFO kablam! = note: if you really need to exhaust the iterator, consider `.for_each(drop)` instead Jul 12 13:18:41.030 INFO kablam! Jul 12 13:18:41.625 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:41.625 INFO kablam! --> benches/interval_tree.rs:17:64 Jul 12 13:18:41.625 INFO kablam! | Jul 12 13:18:41.625 INFO kablam! 17 | b.iter(|| test_insert_query(10, &(100_000..200_000), 1000, (105_000..106_000))); Jul 12 13:18:41.625 INFO kablam! | ^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:41.625 INFO kablam! | Jul 12 13:18:41.625 INFO kablam! = note: #[warn(unused_parens)] on by default Jul 12 13:18:41.625 INFO kablam! Jul 12 13:18:41.625 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:41.625 INFO kablam! --> benches/interval_tree.rs:24:62 Jul 12 13:18:41.625 INFO kablam! | Jul 12 13:18:41.625 INFO kablam! 24 | b.iter(|| test_insert_query(10, &(100_000..200_000), 10, (99_995..199_995))); Jul 12 13:18:41.625 INFO kablam! | ^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:41.625 INFO kablam! Jul 12 13:18:41.625 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:41.625 INFO kablam! --> benches/interval_tree.rs:35:21 Jul 12 13:18:41.625 INFO kablam! | Jul 12 13:18:41.626 INFO kablam! 35 | tree.insert((i..i + insert_size), (i..i + insert_size)); Jul 12 13:18:41.626 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:41.626 INFO kablam! Jul 12 13:18:41.626 INFO kablam! warning: unnecessary parentheses around method argument Jul 12 13:18:41.626 INFO kablam! --> benches/interval_tree.rs:35:43 Jul 12 13:18:41.626 INFO kablam! | Jul 12 13:18:41.626 INFO kablam! 35 | tree.insert((i..i + insert_size), (i..i + insert_size)); Jul 12 13:18:41.626 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:41.626 INFO kablam! Jul 12 13:18:41.626 INFO kablam! warning: unnecessary parentheses around function argument Jul 12 13:18:41.626 INFO kablam! --> benches/interval_tree.rs:46:37 Jul 12 13:18:41.626 INFO kablam! | Jul 12 13:18:41.626 INFO kablam! 46 | assert_intersections(&tree, (lower_bound..upper_bound), &expected_intersections); Jul 12 13:18:41.626 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses Jul 12 13:18:41.626 INFO kablam! Jul 12 13:18:41.987 INFO kablam! Finished dev [unoptimized + debuginfo] target(s) in 49.30s Jul 12 13:18:42.011 INFO kablam! su: No module specific data is present Jul 12 13:18:42.536 INFO running `"docker" "rm" "-f" "8c152e45f867489879fd7110fd43836a27295f4e87a3c4329abd08ba0cf31a1c"` Jul 12 13:18:42.700 INFO blam! 8c152e45f867489879fd7110fd43836a27295f4e87a3c4329abd08ba0cf31a1c