[INFO] cloning repository https://github.com/fg-labs/mako
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/fg-labs/mako" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fmako", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fmako'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 25bb5c14a39c3ddcfb6bfe56d68100a43bee71a9
[INFO] checking fg-labs/mako against 0cefa27fe3deee26fc98ee44249406358d9f0d26 for pr-164789
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fmako" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-0-tc1/source/.cargo/config.toml
[INFO] removed /workspace/builds/worker-0-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/fg-labs/mako
[INFO] finished tweaking git repo https://github.com/fg-labs/mako
[INFO] tweaked toml for git repo https://github.com/fg-labs/mako written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/fg-labs/mako on toolchain 0cefa27fe3deee26fc98ee44249406358d9f0d26
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0cefa27fe3deee26fc98ee44249406358d9f0d26" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/fg-labs/mako already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0cefa27fe3deee26fc98ee44249406358d9f0d26" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:38:12
[INFO] [stderr]    |
[INFO] [stderr] 38 | homepage = "https://github.com/fg-labs/mako"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 43 | repository = "https://github.com/fg-labs/mako"
[INFO] [stderr]    |              ---------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `fg-mako` (manifest) generated 1 warning
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles-csi v0.60.0
[INFO] [stderr]   Downloaded noodles-vcf v0.92.0
[INFO] [stderr]   Downloaded noodles-core v0.20.0
[INFO] [stderr]   Downloaded mimalloc v0.1.52
[INFO] [stderr]   Downloaded noodles-tabix v0.66.0
[INFO] [stderr]   Downloaded read-structure v0.2.0
[INFO] [stderr]   Downloaded fgumi-dna v0.9.0
[INFO] [stderr]   Downloaded noodles-fasta v0.66.0
[INFO] [stderr]   Downloaded noodles v0.115.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.51.0
[INFO] [stderr]   Downloaded libdeflater v1.26.1
[INFO] [stderr]   Downloaded zstd-safe v8.2.0
[INFO] [stderr]   Downloaded generator v0.8.11
[INFO] [stderr]   Downloaded fgumi-tag v0.9.0
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[INFO] [stderr]   Downloaded fgoxide v0.6.0
[INFO] [stderr]   Downloaded fgumi-umi v0.9.0
[INFO] [stderr]   Downloaded zstd v0.14.3
[INFO] [stderr]   Downloaded noodles-bam v0.94.0
[INFO] [stderr]   Downloaded fgumi-bgzf v0.9.0
[INFO] [stderr]   Downloaded bgzf v0.5.0
[INFO] [stderr]   Downloaded fgumi-cli-macros v0.9.0
[INFO] [stderr]   Downloaded noodles-sam v0.89.0
[INFO] [stderr]   Downloaded fgumi-metrics v0.9.0
[INFO] [stderr]   Downloaded cargo-lock v11.1.0
[INFO] [stderr]   Downloaded fgumi-bam-io v0.9.0
[INFO] [stderr]   Downloaded fgumi-sam v0.9.0
[INFO] [stderr]   Downloaded libdeflate-sys v1.26.1
[INFO] [stderr]   Downloaded fgumi-raw-bam v0.9.0
[INFO] [stderr]   Downloaded git2 v0.21.0
[INFO] [stderr]   Downloaded voracious_radix_sort v1.2.0
[INFO] [stderr]   Downloaded fgumi-sort v0.9.0
[INFO] [stderr]   Downloaded fgumi-consensus v0.9.0
[INFO] [stderr]   Downloaded libmimalloc-sys v0.1.49
[INFO] [stderr]   Downloaded fgumi-pipeline-io v0.9.0
[INFO] [stderr]   Downloaded fgumi-pipeline-core v0.9.0
[INFO] [stderr]   Downloaded csv v1.1.6
[INFO] [stderr]   Downloaded zstd-sys v2.1.2+zstd.1.5.7
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[INFO] [stderr]   Downloaded fgumi v0.9.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:c0af3998e971868164375a7dfb646c9933ddd1a3bdb00fa2041266763dc1eeab" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea
[INFO] running `Command { std: "docker" "start" "7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea" "/opt/rustwide/cargo-home/bin/cargo" "+0cefa27fe3deee26fc98ee44249406358d9f0d26" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea" "/opt/rustwide/cargo-home/bin/cargo" "+0cefa27fe3deee26fc98ee44249406358d9f0d26" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:38:12
[INFO] [stderr]    |
[INFO] [stderr] 38 | homepage = "https://github.com/fg-labs/mako"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 43 | repository = "https://github.com/fg-labs/mako"
[INFO] [stderr]    |              ---------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `fg-mako` (manifest) generated 1 warning
[INFO] [stderr]    Compiling libc v0.2.191
[INFO] [stderr]     Checking either v1.19.0
[INFO] [stderr]    Compiling quote v1.0.47
[INFO] [stderr]     Checking regex-automata v0.4.18
[INFO] [stderr]     Checking zlib-rs v0.6.8
[INFO] [stderr]     Checking bit-vec v0.10.1
[INFO] [stderr]     Checking crossbeam-channel v0.5.17
[INFO] [stderr]     Checking hashbrown v0.17.1
[INFO] [stderr]    Compiling serde_core v1.0.229
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]    Compiling icu_normalizer_data v2.3.0
[INFO] [stderr]    Compiling icu_properties_data v2.3.0
[INFO] [stderr]    Compiling smallvec v1.16.3
[INFO] [stderr]    Compiling rustix v1.1.5
[INFO] [stderr]     Checking linux-raw-sys v0.12.1
[INFO] [stderr]    Compiling winnow v1.0.4
[INFO] [stderr]    Compiling syn v3.0.9
[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]    Compiling serde v1.0.229
[INFO] [stderr]    Compiling foldhash v0.1.5
[INFO] [stderr]    Compiling indexmap v2.14.2
[INFO] [stderr]    Compiling hashbrown v0.15.5
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling fixedbitset v0.5.7
[INFO] [stderr]    Compiling toml_parser v1.1.5+spec-1.1.0
[INFO] [stderr]    Compiling toml_writer v1.1.3+spec-1.1.0
[INFO] [stderr]    Compiling bitflags v2.13.2
[INFO] [stderr]     Checking regex-automata v0.1.10
[INFO] [stderr]    Compiling serde_json v1.0.154
[INFO] [stderr]     Checking lazy_static v1.5.1
[INFO] [stderr]    Compiling jobserver v0.1.35
[INFO] [stderr]    Compiling nix v0.31.3
[INFO] [stderr]     Checking ordered-float v2.10.1
[INFO] [stderr]    Compiling zstd-safe v8.2.0
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[INFO] [stderr]    Compiling petgraph v0.8.3
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking crossbeam-queue v0.3.14
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[INFO] [stderr]     Checking rand v0.10.3
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[INFO] [stderr]     Checking itertools v0.14.0
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[INFO] [stderr]     Checking bstr v1.13.1
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[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling assert_cmd v2.2.2
[INFO] [stderr]     Checking predicates-tree v1.0.13
[INFO] [stderr]     Checking env_filter v2.0.0
[INFO] [stderr]     Checking predicates v3.1.4
[INFO] [stderr]     Checking wait-timeout v0.2.1
[INFO] [stderr]    Compiling toml_datetime v1.1.2+spec-1.1.0
[INFO] [stderr]    Compiling serde_spanned v1.1.2
[INFO] [stderr]    Compiling semver v1.0.28
[INFO] [stderr]    Compiling libdeflate-sys v1.26.1
[INFO] [stderr]    Compiling libz-sys v1.1.30
[INFO] [stderr]     Checking noodles-core v0.20.0
[INFO] [stderr]    Compiling libgit2-sys v0.18.8+1.9.7
[INFO] [stderr]    Compiling zstd-sys v2.1.2+zstd.1.5.7
[INFO] [stderr]    Compiling toml v1.1.8+spec-1.1.0
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.49
[INFO] [stderr]    Compiling synstructure v0.14.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling fgumi-cli-macros v0.9.0
[INFO] [stderr]    Compiling enum_dispatch v0.3.13
[INFO] [stderr]    Compiling strum_macros v0.24.3
[INFO] [stderr]     Checking libdeflater v1.26.1
[INFO] [stderr]     Checking noodles-bgzf v0.51.0
[INFO] [stderr]     Checking noodles-csi v0.60.0
[INFO] [stderr]     Checking noodles-fasta v0.66.0
[INFO] [stderr]     Checking noodles-tabix v0.66.0
[INFO] [stderr]     Checking noodles-sam v0.89.0
[INFO] [stderr]    Compiling zerofrom-derive v0.1.8
[INFO] [stderr]    Compiling yoke-derive v0.8.4
[INFO] [stderr]    Compiling zerovec-derive v0.11.6
[INFO] [stderr]    Compiling displaydoc v0.2.7
[INFO] [stderr]    Compiling serde_derive v1.0.229
[INFO] [stderr]    Compiling bytemuck_derive v1.12.1
[INFO] [stderr]     Checking noodles-vcf v0.92.0
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]    Compiling clap_derive v4.6.7
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[INFO] [stderr]     Checking mimalloc v0.1.52
[INFO] [stderr]     Checking env_logger v0.11.11
[INFO] [stderr]    Compiling zerofrom v0.1.8
[INFO] [stderr]    Compiling yoke v0.8.3
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[INFO] [stderr]     Checking noodles v0.115.0
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[INFO] [stderr]     Checking fgumi-pipeline-core v0.9.0
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[INFO] [stderr]    Compiling icu_collections v2.3.0
[INFO] [stderr]    Compiling icu_locale_core v2.3.0
[INFO] [stderr]     Checking zstd v0.14.3
[INFO] [stderr]    Compiling icu_provider v2.3.1
[INFO] [stderr]     Checking bstr v0.2.17
[INFO] [stderr]     Checking serde-value v0.7.0
[INFO] [stderr]    Compiling icu_properties v2.3.0
[INFO] [stderr]    Compiling icu_normalizer v2.3.0
[INFO] [stderr]     Checking serde-aux v4.7.0
[INFO] [stderr]     Checking simba v0.9.1
[INFO] [stderr]     Checking csv v1.1.6
[INFO] [stderr]     Checking read-structure v0.2.0
[INFO] [stderr]     Checking fgoxide v0.6.0
[INFO] [stderr]    Compiling idna_adapter v1.2.2
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]    Compiling git2 v0.21.0
[INFO] [stderr]    Compiling url v2.5.8
[INFO] [stderr]    Compiling cargo-lock v11.1.0
[INFO] [stderr]    Compiling built v0.8.1
[INFO] [stderr]     Checking nalgebra v0.33.3
[INFO] [stderr]    Compiling fgumi v0.9.0
[INFO] [stderr]    Compiling fg-mako v0.1.8 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking fgumi-raw-bam v0.9.0
[INFO] [stderr]     Checking fgumi-bam-io v0.9.0
[INFO] [stderr]     Checking fgumi-sam v0.9.0
[INFO] [stderr]     Checking fgumi-sort v0.9.0
[INFO] [stderr]     Checking fgumi-pipeline-io v0.9.0
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking fgumi-metrics v0.9.0
[INFO] [stderr]     Checking fgumi-consensus v0.9.0
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 52s
[INFO] running `Command { std: "docker" "inspect" "7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea", kill_on_drop: false }`
[INFO] [stdout] 7f52f9c3ab1891cbfdc02f5b7f0802a4928cebb6e6f1ee4a71a3b319c0547aea