[INFO] cloning repository https://github.com/MrObadiahEJ/NeuroKmer
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/MrObadiahEJ/NeuroKmer" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMrObadiahEJ%2FNeuroKmer", kill_on_drop: false }`
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[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b9a9ec248f411710f52bc2370358b9f556bfb9a3
[INFO] checking MrObadiahEJ/NeuroKmer against 7211ea594cbf137ef6118b1752b959dea7cb9088 for pr-164148-crater-rollup
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMrObadiahEJ%2FNeuroKmer" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }`
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[INFO] started tweaking git repo https://github.com/MrObadiahEJ/NeuroKmer
[INFO] finished tweaking git repo https://github.com/MrObadiahEJ/NeuroKmer
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[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7211ea594cbf137ef6118b1752b959dea7cb9088" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/MrObadiahEJ/NeuroKmer already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7211ea594cbf137ef6118b1752b959dea7cb9088" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] [stdout] warning: unused import: `Array1`
[INFO] [stdout]  --> src/associative.rs:5:23
[INFO] [stdout]   |
[INFO] [stdout] 5 | use ndarray::{Array2, Array1};
[INFO] [stdout]   |                       ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Array1`
[INFO] [stdout]  --> src/associative.rs:5:23
[INFO] [stdout]   |
[INFO] [stdout] 5 | use ndarray::{Array2, Array1};
[INFO] [stdout]   |                       ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `v` is never read
[INFO] [stdout]    --> src/spiking_hash.rs:570:29
[INFO] [stdout]     |
[INFO] [stdout] 570 |                 let mut v = _mm256_setzero_ps();
[INFO] [stdout]     |                             ^^^^^^^^^^^^^^^^^^^ this value is reassigned later and never used
[INFO] [stdout] ...
[INFO] [stdout] 583 |                 v = _mm256_loadu_ps(v_arr.as_ptr());
[INFO] [stdout]     |                 ----------------------------------- `v` is overwritten here before the previous value is read
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `v` is never read
[INFO] [stdout]    --> src/spiking_hash.rs:570:29
[INFO] [stdout]     |
[INFO] [stdout] 570 |                 let mut v = _mm256_setzero_ps();
[INFO] [stdout]     |                             ^^^^^^^^^^^^^^^^^^^ this value is reassigned later and never used
[INFO] [stdout] ...
[INFO] [stdout] 583 |                 v = _mm256_loadu_ps(v_arr.as_ptr());
[INFO] [stdout]     |                 ----------------------------------- `v` is overwritten here before the previous value is read
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `count`
[INFO] [stdout]   --> src/associative.rs:98:45
[INFO] [stdout]    |
[INFO] [stdout] 98 |     pub fn store_kmer(&mut self, kmer: u64, count: u32) -> NeuroResult<()> {
[INFO] [stdout]    |                                             ^^^^^ help: if this is intentional, prefix it with an underscore: `_count`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `count`
[INFO] [stdout]   --> src/associative.rs:98:45
[INFO] [stdout]    |
[INFO] [stdout] 98 |     pub fn store_kmer(&mut self, kmer: u64, count: u32) -> NeuroResult<()> {
[INFO] [stdout]    |                                             ^^^^^ help: if this is intentional, prefix it with an underscore: `_count`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `neuron_to_kmers`, `batch_voltages`, `batch_thresholds`, `batch_leaks`, `batch_refractory`, and `current_multiplier` are never read
[INFO] [stdout]   --> src/spiking_hash.rs:28:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | pub struct SpikingKmerCounter {
[INFO] [stdout]    |            ------------------ fields in this struct
[INFO] [stdout] ...
[INFO] [stdout] 28 |     neuron_to_kmers: Vec<Vec<u64>>, // Track which k-mers mapped to each neuron
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 32 |     batch_voltages: Vec<f32>,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout] 33 |     batch_thresholds: Vec<f32>,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] 34 |     batch_leaks: Vec<f32>,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout] 35 |     batch_refractory: Vec<u32>,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] 36 |     current_multiplier: f32,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `neuron_to_kmers`, `batch_voltages`, `batch_thresholds`, `batch_leaks`, `batch_refractory`, and `current_multiplier` are never read
[INFO] [stdout]   --> src/spiking_hash.rs:28:5
[INFO] [stdout]    |
[INFO] [stdout] 16 | pub struct SpikingKmerCounter {
[INFO] [stdout]    |            ------------------ fields in this struct
[INFO] [stdout] ...
[INFO] [stdout] 28 |     neuron_to_kmers: Vec<Vec<u64>>, // Track which k-mers mapped to each neuron
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 32 |     batch_voltages: Vec<f32>,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout] 33 |     batch_thresholds: Vec<f32>,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] 34 |     batch_leaks: Vec<f32>,
[INFO] [stdout]    |     ^^^^^^^^^^^
[INFO] [stdout] 35 |     batch_refractory: Vec<u32>,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] 36 |     current_multiplier: f32,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `simulate_spikes` is never used
[INFO] [stdout]    --> src/spiking_hash.rs:488:8
[INFO] [stdout]     |
[INFO] [stdout]  39 | impl SpikingKmerCounter {
[INFO] [stdout]     | ----------------------- method in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 488 |     fn simulate_spikes(&mut self) {
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `simulate_spikes` is never used
[INFO] [stdout]    --> src/spiking_hash.rs:488:8
[INFO] [stdout]     |
[INFO] [stdout]  39 | impl SpikingKmerCounter {
[INFO] [stdout]     | ----------------------- method in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 488 |     fn simulate_spikes(&mut self) {
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `neurokmer::utils::canonical_kmer`
[INFO] [stdout]  --> tests/test_counting.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use neurokmer::utils::canonical_kmer;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `SpikingKmerCounter`, `pack_canonical`, and `pack_kmer`
[INFO] [stdout]  --> tests/test_counting.rs:2:17
[INFO] [stdout]   |
[INFO] [stdout] 2 | use neurokmer::{SpikingKmerCounter, pack_canonical, pack_kmer};
[INFO] [stdout]   |                 ^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^  ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `BenchmarkId`
[INFO] [stdout]  --> benches/compare_counters.rs:1:17
[INFO] [stdout]   |
[INFO] [stdout] 1 | use criterion::{BenchmarkId, Criterion, black_box, criterion_group, criterion_main};
[INFO] [stdout]   |                 ^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `criterion::black_box`: use `std::hint::black_box()` instead
[INFO] [stdout]  --> benches/compare_counters.rs:1:41
[INFO] [stdout]   |
[INFO] [stdout] 1 | use criterion::{BenchmarkId, Criterion, black_box, criterion_group, criterion_main};
[INFO] [stdout]   |                                         ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `criterion::black_box`: use `std::hint::black_box()` instead
[INFO] [stdout]   --> benches/compare_counters.rs:41:17
[INFO] [stdout]    |
[INFO] [stdout] 41 |                 black_box(counter.energy.total_spikes);
[INFO] [stdout]    |                 ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `criterion::black_box`: use `std::hint::black_box()` instead
[INFO] [stdout]   --> benches/compare_counters.rs:52:17
[INFO] [stdout]    |
[INFO] [stdout] 52 |                 black_box(counter.energy.total_spikes);
[INFO] [stdout]    |                 ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] warning: unused dependency `bio`
[INFO] [stderr]  --> Cargo.toml:2:1
[INFO] [stderr]   |
[INFO] [stderr] 2 | bio = "3.0.0"
[INFO] [stderr]   | ^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `cargo::unused_dependencies` is set to `warn` by default
[INFO] [stderr] help: consider removing the dependency on `bio`
[INFO] [stderr] warning: unused dependency `rand`
[INFO] [stderr]   --> Cargo.toml:11:1
[INFO] [stderr]    |
[INFO] [stderr] 11 | rand = "0.10.0"
[INFO] [stderr]    | ^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr] help: consider removing the dependency on `rand`
[INFO] [stderr] warning: `neurokmer` (manifest) generated 2 warnings
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 18s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "9e2793d200d05b637976112b965d546f0c0e2dd55595c859fbaff454ed91373b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9e2793d200d05b637976112b965d546f0c0e2dd55595c859fbaff454ed91373b", kill_on_drop: false }`
[INFO] [stdout] 9e2793d200d05b637976112b965d546f0c0e2dd55595c859fbaff454ed91373b