[INFO] cloning repository https://github.com/tolkit/fasta_windows
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/tolkit/fasta_windows" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftolkit%2Ffasta_windows", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftolkit%2Ffasta_windows'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 2727556c715d7d1d0077ceccca96d700b3a587c2
[INFO] checking tolkit/fasta_windows against be3da1e8c043bb6f1f335463d3b1335cdf50b03c for pr-162597
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftolkit%2Ffasta_windows" "/workspace/builds/worker-6-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/tolkit/fasta_windows
[INFO] finished tweaking git repo https://github.com/tolkit/fasta_windows
[INFO] tweaked toml for git repo https://github.com/tolkit/fasta_windows written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/tolkit/fasta_windows on toolchain be3da1e8c043bb6f1f335463d3b1335cdf50b03c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+be3da1e8c043bb6f1f335463d3b1335cdf50b03c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/tolkit/fasta_windows already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+be3da1e8c043bb6f1f335463d3b1335cdf50b03c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: binary `fasta_windows` should have a kebab-case name
[INFO] [stderr]    |
[INFO] [stderr]  1 | /workspace/builds/worker-6-tc2/source/target/.../fasta_windows
[INFO] [stderr]    |                                                  ^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::non_kebab_case_bins` is set to `warn` by default
[INFO] [stderr] help: to change the binary name to `fasta-windows`, convert `package.name`
[INFO] [stderr]   --> Cargo.toml:28:8
[INFO] [stderr]    |
[INFO] [stderr] 28 - name = "fasta_windows"
[INFO] [stderr] 28 + name = "fasta-windows"
[INFO] [stderr]    |
[INFO] [stderr] help: to change the binary name to `fasta-windows`, specify `bin.name`
[INFO] [stderr]   --> Cargo.toml:30:19
[INFO] [stderr]    |
[INFO] [stderr] 30 ~ version = "0.2.6"
[INFO] [stderr] 31 + [[bin]]
[INFO] [stderr] 32 + name = "fasta-windows"
[INFO] [stderr] 33 + path = "src/main.rs"
[INFO] [stderr]    |
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:25:12
[INFO] [stderr]    |
[INFO] [stderr] 25 | homepage = "https://github.com/tolkit/fasta_windows"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 29 | repository = "https://github.com/tolkit/fasta_windows"
[INFO] [stderr]    |              -----------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `fasta_windows` (manifest) generated 2 warnings
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking tolkit/fasta_windows against be3da1e8c043bb6f1f335463d3b1335cdf50b03c for pr-162597
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftolkit%2Ffasta_windows" "/workspace/builds/worker-6-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/tolkit/fasta_windows
[INFO] finished tweaking git repo https://github.com/tolkit/fasta_windows
[INFO] tweaked toml for git repo https://github.com/tolkit/fasta_windows written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/tolkit/fasta_windows on toolchain be3da1e8c043bb6f1f335463d3b1335cdf50b03c
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+be3da1e8c043bb6f1f335463d3b1335cdf50b03c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/tolkit/fasta_windows already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+be3da1e8c043bb6f1f335463d3b1335cdf50b03c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: binary `fasta_windows` should have a kebab-case name
[INFO] [stderr]    |
[INFO] [stderr]  1 | /workspace/builds/worker-6-tc2/source/target/.../fasta_windows
[INFO] [stderr]    |                                                  ^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::non_kebab_case_bins` is set to `warn` by default
[INFO] [stderr] help: to change the binary name to `fasta-windows`, convert `package.name`
[INFO] [stderr]   --> Cargo.toml:28:8
[INFO] [stderr]    |
[INFO] [stderr] 28 - name = "fasta_windows"
[INFO] [stderr] 28 + name = "fasta-windows"
[INFO] [stderr]    |
[INFO] [stderr] help: to change the binary name to `fasta-windows`, specify `bin.name`
[INFO] [stderr]   --> Cargo.toml:30:19
[INFO] [stderr]    |
[INFO] [stderr] 30 ~ version = "0.2.6"
[INFO] [stderr] 31 + [[bin]]
[INFO] [stderr] 32 + name = "fasta-windows"
[INFO] [stderr] 33 + path = "src/main.rs"
[INFO] [stderr]    |
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:25:12
[INFO] [stderr]    |
[INFO] [stderr] 25 | homepage = "https://github.com/tolkit/fasta_windows"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 29 | repository = "https://github.com/tolkit/fasta_windows"
[INFO] [stderr]    |              -----------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `fasta_windows` (manifest) generated 2 warnings
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded buffer-redux v1.1.0
[INFO] [stderr]   Downloaded liblzma v0.3.6
[INFO] [stderr]   Downloaded once_cell v1.13.1
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded enum-map v1.1.1
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded enum-map-derive v0.6.0
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded serde_derive v1.0.159
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded serde v1.0.159
[INFO] [stderr]   Downloaded statrs v0.16.0
[INFO] [stderr]   Downloaded bio v2.3.0
[INFO] [stderr]   Downloaded needletail v0.7.3
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded csv v1.2.1
[INFO] [stderr]   Downloaded liblzma-sys v0.3.13
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21
[INFO] running `Command { std: "docker" "start" "bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21" "/opt/rustwide/cargo-home/bin/cargo" "+be3da1e8c043bb6f1f335463d3b1335cdf50b03c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21" "/opt/rustwide/cargo-home/bin/cargo" "+be3da1e8c043bb6f1f335463d3b1335cdf50b03c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: binary `fasta_windows` should have a kebab-case name
[INFO] [stderr]    |
[INFO] [stderr]  1 | /opt/rustwide/target/.../fasta_windows
[INFO] [stderr]    |                          ^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::non_kebab_case_bins` is set to `warn` by default
[INFO] [stderr] help: to change the binary name to `fasta-windows`, convert `package.name`
[INFO] [stderr]   --> Cargo.toml:28:8
[INFO] [stderr]    |
[INFO] [stderr] 28 - name = "fasta_windows"
[INFO] [stderr] 28 + name = "fasta-windows"
[INFO] [stderr]    |
[INFO] [stderr] help: to change the binary name to `fasta-windows`, specify `bin.name`
[INFO] [stderr]   --> Cargo.toml:30:19
[INFO] [stderr]    |
[INFO] [stderr] 30 ~ version = "0.2.6"
[INFO] [stderr] 31 + [[bin]]
[INFO] [stderr] 32 + name = "fasta-windows"
[INFO] [stderr] 33 + path = "src/main.rs"
[INFO] [stderr]    |
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:25:12
[INFO] [stderr]    |
[INFO] [stderr] 25 | homepage = "https://github.com/tolkit/fasta_windows"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 29 | repository = "https://github.com/tolkit/fasta_windows"
[INFO] [stderr]    |              -----------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `fasta_windows` (manifest) generated 2 warnings
[INFO] [stderr]    Compiling libm v0.2.6
[INFO] [stderr]    Compiling libc v0.2.140
[INFO] [stderr]    Compiling serde_derive v1.0.159
[INFO] [stderr]    Compiling proc-macro2 v1.0.101
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling serde v1.0.159
[INFO] [stderr]     Checking bytemuck v1.13.1
[INFO] [stderr]    Compiling paste v1.0.12
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking matrixmultiply v0.3.2
[INFO] [stderr]     Checking safe_arch v0.6.0
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking regex-syntax v0.8.6
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]     Checking wide v0.7.8
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking getrandom v0.2.8
[INFO] [stderr]    Compiling rustversion v1.0.12
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling syn v2.0.106
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]    Compiling portable-atomic v1.11.1
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking num-complex v0.4.3
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling thiserror v2.0.16
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]     Checking ryu v1.0.13
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking once_cell v1.13.1
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking console v0.16.0
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking petgraph v0.6.3
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking clap_builder v4.5.47
[INFO] [stderr]     Checking regex-automata v0.4.10
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking ordered-float v5.0.0
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.40
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]     Checking regex v1.11.2
[INFO] [stderr]    Compiling thiserror-impl v2.0.16
[INFO] [stderr]     Checking bytecount v0.6.3
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking thiserror v1.0.40
[INFO] [stderr]     Checking unit-prefix v0.5.1
[INFO] [stderr]     Checking strum v0.24.1
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking indicatif v0.18.0
[INFO] [stderr]     Checking clap v4.5.47
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling enum-map-derive v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.24.3
[INFO] [stderr]     Checking enum-map v1.1.1
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking csv v1.2.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.8.3
[INFO] [stderr]     Checking statrs v0.16.0
[INFO] [stderr]     Checking bio v2.3.0
[INFO] [stderr]     Checking fasta_windows v0.2.6 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 11s
[INFO] running `Command { std: "docker" "inspect" "bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21", kill_on_drop: false }`
[INFO] [stdout] bd954801142adc153fdf15502887fdf15a3330fe084dc234d490c0d5cfaa7e21
