[INFO] cloning repository https://github.com/Clinical-Genomics/scout_loader [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Clinical-Genomics/scout_loader" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 40aad122877c2e7aa542bb88e21977cb4d6cf3c6 [INFO] checking Clinical-Genomics/scout_loader/40aad122877c2e7aa542bb88e21977cb4d6cf3c6 against 018018e881e2db0956f229dbb543e21f058d1ce7 for pr-162597 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FClinical-Genomics%2Fscout_loader" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-0-tc1/source/rust-toolchain.toml [INFO] started tweaking git repo https://github.com/Clinical-Genomics/scout_loader [INFO] finished tweaking git repo https://github.com/Clinical-Genomics/scout_loader [INFO] tweaked toml for git repo https://github.com/Clinical-Genomics/scout_loader written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/Clinical-Genomics/scout_loader on toolchain 018018e881e2db0956f229dbb543e21f058d1ce7 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+018018e881e2db0956f229dbb543e21f058d1ce7" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/Clinical-Genomics/scout_loader already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+018018e881e2db0956f229dbb543e21f058d1ce7" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: binary `scout_loader` should have a kebab-case name [INFO] [stderr] | [INFO] [stderr] 1 | /workspace/builds/worker-0-tc1/source/target/.../scout_loader [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `cargo::non_kebab_case_bins` is set to `warn` by default [INFO] [stderr] help: to change the binary name to `scout-loader`, convert `package.name` [INFO] [stderr] --> Cargo.toml:39:8 [INFO] [stderr] | [INFO] [stderr] 39 - name = "scout_loader" [INFO] [stderr] 39 + name = "scout-loader" [INFO] [stderr] | [INFO] [stderr] help: to change the binary name to `scout-loader`, specify `bin.name` [INFO] [stderr] --> Cargo.toml:40:19 [INFO] [stderr] | [INFO] [stderr] 40 ~ version = "0.1.1" [INFO] [stderr] 41 + [[bin]] [INFO] [stderr] 42 + name = "scout-loader" [INFO] [stderr] 43 + path = "src/main.rs" [INFO] [stderr] | [INFO] [stderr] warning: `scout_loader` (manifest) generated 1 warning [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded rust-htslib v1.0.1 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded derive-new v0.7.0 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded rustls-webpki v0.103.14 [INFO] [stderr] Downloaded md5 v0.8.1 [INFO] [stderr] Downloaded indicatif v0.18.6 [INFO] [stderr] Downloaded curl-sys v0.4.90+curl-8.21.0 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded openssl-src v300.6.1+3.6.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da [INFO] running `Command { std: "docker" "start" "e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da" "/opt/rustwide/cargo-home/bin/cargo" "+018018e881e2db0956f229dbb543e21f058d1ce7" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da" "/opt/rustwide/cargo-home/bin/cargo" "+018018e881e2db0956f229dbb543e21f058d1ce7" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] warning: binary `scout_loader` should have a kebab-case name [INFO] [stderr] | [INFO] [stderr] 1 | /opt/rustwide/target/.../scout_loader [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `cargo::non_kebab_case_bins` is set to `warn` by default [INFO] [stderr] help: to change the binary name to `scout-loader`, convert `package.name` [INFO] [stderr] --> Cargo.toml:39:8 [INFO] [stderr] | [INFO] [stderr] 39 - name = "scout_loader" [INFO] [stderr] 39 + name = "scout-loader" [INFO] [stderr] | [INFO] [stderr] help: to change the binary name to `scout-loader`, specify `bin.name` [INFO] [stderr] --> Cargo.toml:40:19 [INFO] [stderr] | [INFO] [stderr] 40 ~ version = "0.1.1" [INFO] [stderr] 41 + [[bin]] [INFO] [stderr] 42 + name = "scout-loader" [INFO] [stderr] 43 + path = "src/main.rs" [INFO] [stderr] | [INFO] [stderr] warning: `scout_loader` (manifest) generated 1 warning [INFO] [stderr] Compiling quote v1.0.46 [INFO] [stderr] Compiling portable-atomic v1.15.0 [INFO] [stderr] Checking critical-section v1.2.0 [INFO] [stderr] Checking smallvec v1.15.2 [INFO] [stderr] Compiling crunchy v0.2.4 [INFO] [stderr] Compiling getrandom v0.4.3 [INFO] [stderr] Compiling libc v0.2.186 [INFO] [stderr] Compiling tiny-keccak v2.0.2 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Checking futures-sink v0.3.34 [INFO] [stderr] Checking cmov v0.5.4 [INFO] [stderr] Compiling once_cell v1.21.4 [INFO] [stderr] Checking futures-core v0.3.34 [INFO] [stderr] Checking aho-corasick v1.1.4 [INFO] [stderr] Checking futures-io v0.3.34 [INFO] [stderr] Compiling crossbeam-utils v0.8.22 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.8.11 [INFO] [stderr] Checking futures-task v0.3.34 [INFO] [stderr] Checking tinyvec v1.12.0 [INFO] [stderr] Checking futures-channel v0.3.34 [INFO] [stderr] Checking form_urlencoded v1.2.2 [INFO] [stderr] Checking ctutils v0.4.2 [INFO] [stderr] Checking indexmap v2.14.0 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Checking zerocopy v0.8.54 [INFO] [stderr] Compiling syn v2.0.118 [INFO] [stderr] Compiling syn v3.0.3 [INFO] [stderr] Checking digest v0.11.3 [INFO] [stderr] Compiling libloading v0.8.9 [INFO] [stderr] Compiling either v1.16.0 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Checking rustls-pki-types v1.15.1 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Checking chacha20 v0.10.1 [INFO] [stderr] Checking getrandom v0.2.17 [INFO] [stderr] Checking tracing-core v0.1.36 [INFO] [stderr] Compiling bitflags v2.13.0 [INFO] [stderr] Checking regex-automata v0.4.16 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling rustversion v1.0.23 [INFO] [stderr] Compiling crossbeam-epoch v0.9.20 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Checking rand v0.10.2 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking parking_lot_core v0.9.12 [INFO] [stderr] Checking uuid v1.24.0 [INFO] [stderr] Compiling rustls v0.23.43 [INFO] [stderr] Compiling serde_json v1.0.150 [INFO] [stderr] Checking data-encoding v2.11.0 [INFO] [stderr] Compiling time-macros v0.2.31 [INFO] [stderr] Checking tracing v0.1.44 [INFO] [stderr] Checking parking_lot v0.12.5 [INFO] [stderr] Compiling jobserver v0.1.35 [INFO] [stderr] Compiling const-random-macro v0.1.16 [INFO] [stderr] Checking crossbeam-channel v0.5.16 [INFO] [stderr] Compiling cc v1.2.66 [INFO] [stderr] Compiling const-random v0.1.18 [INFO] [stderr] Compiling rustc_version_runtime v0.3.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking time-core v0.1.9 [INFO] [stderr] Checking semver v1.0.28 [INFO] [stderr] Checking unicode-normalization v0.1.25 [INFO] [stderr] Checking moka v0.12.16 [INFO] [stderr] Checking serde_bytes v0.11.19 [INFO] [stderr] Checking rustc_version v0.4.1 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Checking unicode-width v0.2.2 [INFO] [stderr] Checking unicode-properties v0.1.4 [INFO] [stderr] Checking toml_write v0.1.2 [INFO] [stderr] Checking unicode-bidi v0.3.18 [INFO] [stderr] Checking simd-adler32 v0.3.10 [INFO] [stderr] Checking winnow v0.7.15 [INFO] [stderr] Checking resolv-conf v0.7.6 [INFO] [stderr] Checking miniz_oxide v0.8.9 [INFO] [stderr] Checking console v0.16.4 [INFO] [stderr] Checking stringprep v0.1.5 [INFO] [stderr] Checking webpki-roots v1.0.9 [INFO] [stderr] Checking time v0.3.53 [INFO] [stderr] Compiling cmake v0.1.58 [INFO] [stderr] Compiling openssl-src v300.6.1+3.6.3 [INFO] [stderr] Checking md-5 v0.11.0 [INFO] [stderr] Checking hmac v0.13.0 [INFO] [stderr] Checking pbkdf2 v0.13.0 [INFO] [stderr] Checking sha1 v0.11.0 [INFO] [stderr] Checking sha2 v0.11.0 [INFO] [stderr] Checking take_mut v0.2.2 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking unit-prefix v0.5.2 [INFO] [stderr] Checking predicates-core v1.0.10 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking unsafe-libyaml v0.2.11 [INFO] [stderr] Checking indicatif v0.18.6 [INFO] [stderr] Checking flate2 v1.1.9 [INFO] [stderr] Checking float-cmp v0.10.0 [INFO] [stderr] Compiling assert_cmd v2.2.2 [INFO] [stderr] Checking regex v1.13.1 [INFO] [stderr] Checking normalize-line-endings v0.3.0 [INFO] [stderr] Checking md5 v0.8.1 [INFO] [stderr] Checking difflib v0.4.0 [INFO] [stderr] Checking termtree v0.5.1 [INFO] [stderr] Checking rustix v1.1.4 [INFO] [stderr] Checking predicates-tree v1.0.13 [INFO] [stderr] Checking predicates v3.1.4 [INFO] [stderr] Checking bstr v1.13.0 [INFO] [stderr] Compiling openssl-sys v0.9.117 [INFO] [stderr] Compiling ring v0.17.14 [INFO] [stderr] Compiling libz-sys v1.1.29 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling curl-sys v0.4.90+curl-8.21.0 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Checking wait-timeout v0.2.1 [INFO] [stderr] Compiling serde_derive v1.0.229 [INFO] [stderr] Compiling futures-macro v0.3.34 [INFO] [stderr] Compiling clap_derive v4.6.4 [INFO] [stderr] Checking futures-util v0.3.34 [INFO] [stderr] Checking tempfile v3.27.0 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling darling_core v0.23.0 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Checking ahash v0.8.12 [INFO] [stderr] Checking rand_chacha v0.9.0 [INFO] [stderr] Checking clap v4.6.4 [INFO] [stderr] Checking rand v0.9.5 [INFO] [stderr] Compiling zerofrom-derive v0.1.7 [INFO] [stderr] Compiling yoke-derive v0.8.2 [INFO] [stderr] Compiling zerovec-derive v0.11.3 [INFO] [stderr] Compiling displaydoc v0.2.6 [INFO] [stderr] Compiling macro_magic_core_macros v0.5.1 [INFO] [stderr] Compiling derive-syn-parse v0.2.0 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling tokio-macros v2.7.0 [INFO] [stderr] Compiling async-trait v0.1.89 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Checking serde v1.0.229 [INFO] [stderr] Checking tokio v1.52.3 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling macro_magic_core v0.5.1 [INFO] [stderr] Compiling macro_magic_macros v0.5.1 [INFO] [stderr] Compiling typed-builder-macro v0.22.0 [INFO] [stderr] Compiling derive_more-impl v2.1.1 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Checking ipnet v2.12.0 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Checking zerofrom v0.1.8 [INFO] [stderr] Checking thiserror v2.0.18 [INFO] [stderr] Checking toml_datetime v0.6.11 [INFO] [stderr] Checking serde_spanned v0.6.9 [INFO] [stderr] Checking yoke v0.8.3 [INFO] [stderr] Compiling macro_magic v0.5.1 [INFO] [stderr] Checking zerotrie v0.2.4 [INFO] [stderr] Compiling mongodb-internal-macros v3.8.0 [INFO] [stderr] Checking bson v2.15.0 [INFO] [stderr] Checking toml_edit v0.22.27 [INFO] [stderr] Checking prefix-trie v0.8.4 [INFO] [stderr] Compiling derive-where v1.6.1 [INFO] [stderr] Checking zerovec v0.11.6 [INFO] [stderr] Checking rustls-webpki v0.103.14 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Checking tinystr v0.8.3 [INFO] [stderr] Checking potential_utf v0.1.5 [INFO] [stderr] Checking serde_yaml v0.9.34+deprecated [INFO] [stderr] Checking icu_collections v2.2.0 [INFO] [stderr] Compiling darling_macro v0.23.0 [INFO] [stderr] Checking icu_locale_core v2.2.0 [INFO] [stderr] Compiling darling v0.23.0 [INFO] [stderr] Compiling serde_with_macros v3.22.0 [INFO] [stderr] Checking typed-builder v0.22.0 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking futures-executor v0.3.34 [INFO] [stderr] Checking derive_more v2.1.1 [INFO] [stderr] Checking futures v0.3.34 [INFO] [stderr] Checking toml v0.8.23 [INFO] [stderr] Checking serde_with v3.22.0 [INFO] [stderr] Checking icu_provider v2.2.0 [INFO] [stderr] Checking icu_properties v2.2.0 [INFO] [stderr] Checking icu_normalizer v2.2.0 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Checking idna_adapter v1.2.2 [INFO] [stderr] Checking idna v1.1.0 [INFO] [stderr] Checking url v2.5.8 [INFO] [stderr] Checking tokio-util v0.7.18 [INFO] [stderr] Checking hickory-proto v0.26.1 [INFO] [stderr] Checking tokio-rustls v0.26.4 [INFO] [stderr] Checking hickory-net v0.26.1 [INFO] [stderr] Checking hickory-resolver v0.26.1 [INFO] [stderr] Checking mongodb v3.8.0 [INFO] [stderr] Checking rust-htslib v1.0.1 [INFO] [stderr] Checking scout_loader v0.1.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 37s [INFO] running `Command { std: "docker" "inspect" "e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da", kill_on_drop: false }` [INFO] [stdout] e30f6b4182b41d2b6f7b13c3c1580e21af44a050e61994911a3544ad2417b8da