[INFO] fetching crate bramble-cli 0.1.8...
[INFO] checking bramble-cli-0.1.8 against eca445e5ae4a6679cc27d3a09106ce245e13a5a6 for pr-162478
[INFO] extracting crate bramble-cli 0.1.8 into /workspace/builds/worker-3-tc1/source
[INFO] started tweaking crates.io crate bramble-cli 0.1.8
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate bramble-cli 0.1.8
[INFO] tweaked toml for crates.io crate bramble-cli 0.1.8 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate bramble-cli 0.1.8 on toolchain eca445e5ae4a6679cc27d3a09106ce245e13a5a6
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+eca445e5ae4a6679cc27d3a09106ce245e13a5a6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate bramble-cli 0.1.8 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+eca445e5ae4a6679cc27d3a09106ce245e13a5a6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: explicit `package.readme` can be inferred
[INFO] [stderr]   --> Cargo.toml:54:1
[INFO] [stderr]    |
[INFO] [stderr] 54 | readme = "README.md"
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::manual_readme` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.readme`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:50:12
[INFO] [stderr]    |
[INFO] [stderr] 50 | homepage = "https://github.com/zrudnick/bramble"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 55 | repository = "https://github.com/zrudnick/bramble"
[INFO] [stderr]    |              -------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `bramble-cli` (manifest) generated 2 warnings
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded rust-htslib v1.0.1
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded noodles-gtf v0.56.0
[INFO] [stderr]   Downloaded buffer-redux v1.1.0
[INFO] [stderr]   Downloaded bit-vec v0.10.1
[INFO] [stderr]   Downloaded noodles v0.115.0
[INFO] [stderr]   Downloaded noodles-gff v0.61.0
[INFO] [stderr]   Downloaded noodles-csi v0.60.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.51.0
[INFO] [stderr]   Downloaded coitrees v0.4.0
[INFO] [stderr]   Downloaded bramble-rs v0.1.8
[INFO] [stderr]   Downloaded ksw2rs v0.2.0
[INFO] [stderr]   Downloaded noodles-sam v0.89.0
[INFO] [stderr]   Downloaded needletail v0.7.3
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4
[INFO] running `Command { std: "docker" "start" "4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4" "/opt/rustwide/cargo-home/bin/cargo" "+eca445e5ae4a6679cc27d3a09106ce245e13a5a6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4" "/opt/rustwide/cargo-home/bin/cargo" "+eca445e5ae4a6679cc27d3a09106ce245e13a5a6" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: explicit `package.readme` can be inferred
[INFO] [stderr]   --> Cargo.toml:54:1
[INFO] [stderr]    |
[INFO] [stderr] 54 | readme = "README.md"
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::manual_readme` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.readme`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:50:12
[INFO] [stderr]    |
[INFO] [stderr] 50 | homepage = "https://github.com/zrudnick/bramble"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 55 | repository = "https://github.com/zrudnick/bramble"
[INFO] [stderr]    |              -------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `bramble-cli` (manifest) generated 2 warnings
[INFO] [stderr]     Checking memchr v2.8.1
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]     Checking either v1.16.0
[INFO] [stderr]     Checking zlib-rs v0.6.3
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]     Checking bit-vec v0.10.1
[INFO] [stderr]    Compiling cc v1.2.63
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]    Compiling displaydoc v0.2.6
[INFO] [stderr]     Checking crossbeam-deque v0.8.7
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]     Checking yoke v0.8.2
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking rayon-core v1.13.0
[INFO] [stderr]    Compiling bitflags v2.11.1
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling zerocopy v0.8.50
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling portable-atomic v1.14.0
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking buffer-redux v1.1.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]     Checking zerovec v0.11.6
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling syn v3.0.3
[INFO] [stderr]     Checking noodles-core v0.20.0
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking potential_utf v0.1.5
[INFO] [stderr]     Checking log v0.4.30
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking clap_builder v4.6.2
[INFO] [stderr]     Checking tracing-log v0.2.0
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking needletail v0.7.3
[INFO] [stderr]     Checking console v0.16.4
[INFO] [stderr]    Compiling cmake v0.1.58
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking thiserror v2.0.18
[INFO] [stderr]     Checking futures-sink v0.3.32
[INFO] [stderr]     Checking coitrees v0.4.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking flume v0.12.0
[INFO] [stderr]     Checking indicatif v0.18.6
[INFO] [stderr]    Compiling libz-sys v1.1.28
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.49
[INFO] [stderr]    Compiling ksw2rs v0.2.0
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]     Checking noodles-bgzf v0.51.0
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]     Checking noodles-csi v0.60.0
[INFO] [stderr]     Checking noodles-gff v0.61.0
[INFO] [stderr]     Checking noodles-sam v0.89.0
[INFO] [stderr]     Checking noodles-gtf v0.56.0
[INFO] [stderr]     Checking idna_adapter v1.2.2
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking mimalloc v0.1.52
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]    Compiling clap_derive v4.6.4
[INFO] [stderr]     Checking noodles v0.115.0
[INFO] [stderr]     Checking matchers v0.2.0
[INFO] [stderr]     Checking tracing-subscriber v0.3.23
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking ahash v0.8.12
[INFO] [stderr]     Checking clap v4.6.4
[INFO] [stderr]     Checking bramble-rs v0.1.8
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking rust-htslib v1.0.1
[INFO] [stderr]     Checking bramble-cli v0.1.8 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 31.23s
[INFO] running `Command { std: "docker" "inspect" "4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4", kill_on_drop: false }`
[INFO] [stdout] 4678acbd2581bddf8bd8ce195202874fa8b937569022af2d613bb864d255d1d4
