[INFO] fetching crate piscem 0.23.0...
[INFO] checking piscem-0.23.0 against d8df82673d5911b6112a85bf91d9adefb2c66a1a for pr-162242
[INFO] extracting crate piscem 0.23.0 into /workspace/builds/worker-1-tc1/source
[INFO] removed /workspace/builds/worker-1-tc1/source/.cargo/config.toml
[INFO] started tweaking crates.io crate piscem 0.23.0
[INFO] finished tweaking crates.io crate piscem 0.23.0
[INFO] tweaked toml for crates.io crate piscem 0.23.0 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate piscem 0.23.0 on toolchain d8df82673d5911b6112a85bf91d9adefb2c66a1a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d8df82673d5911b6112a85bf91d9adefb2c66a1a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate piscem 0.23.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d8df82673d5911b6112a85bf91d9adefb2c66a1a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: explicit `package.readme` can be inferred
[INFO] [stderr]   --> Cargo.toml:54:1
[INFO] [stderr]    |
[INFO] [stderr] 54 | readme = "README.md"
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::manual_readme` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.readme`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:50:12
[INFO] [stderr]    |
[INFO] [stderr] 50 | homepage = "https://github.com/COMBINE-lab/piscem"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 55 | repository = "https://github.com/COMBINE-lab/piscem"
[INFO] [stderr]    |              ---------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `piscem` (manifest) generated 2 warnings
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded sha2-asm v0.6.4
[INFO] [stderr]   Downloaded liblzma v0.3.6
[INFO] [stderr]   Downloaded path-tools v0.1.0
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[INFO] [stderr]   Downloaded value-traits-derive v0.2.1
[INFO] [stderr]   Downloaded stable_try_trait_v2 v1.75.1
[INFO] [stderr]   Downloaded sealed v0.6.0
[INFO] [stderr]   Downloaded block-pseudorand v0.1.2
[INFO] [stderr]   Downloaded partition v0.1.2
[INFO] [stderr]   Downloaded arbitrary-chunks v0.4.1
[INFO] [stderr]   Downloaded thread-priority v3.1.1
[INFO] [stderr]   Downloaded mem_dbg-derive v0.3.4
[INFO] [stderr]   Downloaded lender-derive v0.1.3
[INFO] [stderr]   Downloaded buffer-redux v1.1.0
[INFO] [stderr]   Downloaded num-primitive v0.2.1
[INFO] [stderr]   Downloaded mmap-rs v0.7.0
[INFO] [stderr]   Downloaded value-traits v0.2.1
[INFO] [stderr]   Downloaded chiapos-chacha8 v0.1.0
[INFO] [stderr]   Downloaded maybe-dangling v0.1.2
[INFO] [stderr]   Downloaded atomic-primitive v0.1.4
[INFO] [stderr]   Downloaded impl-tools v0.11.4
[INFO] [stderr]   Downloaded impl-tools-lib v0.11.4
[INFO] [stderr]   Downloaded epserde-derive v0.12.5
[INFO] [stderr]   Downloaded pluralizer v0.5.0
[INFO] [stderr]   Downloaded dsi-progress-logger v0.8.9
[INFO] [stderr]   Downloaded seedable_hash v0.2.3
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[INFO] [stderr]   Downloaded tiny-dict v0.7.1
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[INFO] [stderr]   Downloaded seq_geom_parser v1.1.0
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[INFO] [stderr]   Downloaded ambassador v0.5.1
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[INFO] [stderr]   Downloaded bitm v0.5.2
[INFO] [stderr]   Downloaded epserde v0.12.6
[INFO] [stderr]   Downloaded niffler v3.0.0
[INFO] [stderr]   Downloaded packed-seq v5.0.0
[INFO] [stderr]   Downloaded ph-temp v0.12.0
[INFO] [stderr]   Downloaded thread-broker v0.1.0
[INFO] [stderr]   Downloaded ph v0.11.0
[INFO] [stderr]   Downloaded libz-rs-sys v0.6.7
[INFO] [stderr]   Downloaded sshash-lib v0.7.1
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[INFO] [stderr]   Downloaded lender v0.6.2
[INFO] [stderr]   Downloaded needletail v0.6.3
[INFO] [stderr]   Downloaded paraseq-temp v0.5.0-pre.2
[INFO] [stderr]   Downloaded sysinfo v0.36.1
[INFO] [stderr]   Downloaded chumsky v0.12.0
[INFO] [stderr]   Downloaded rapidgzip-core v0.3.1
[INFO] [stderr]   Downloaded wide v1.7.0
[INFO] [stderr]   Downloaded voracious_radix_sort v1.2.0
[INFO] [stderr]   Downloaded piscem-rs v0.10.0
[INFO] [stderr]   Downloaded needletail v0.7.3
[INFO] [stderr]   Downloaded sux v0.14.0
[INFO] [stderr]   Downloaded succinctly v0.6.0
[INFO] [stderr]   Downloaded regex-automata v0.3.9
[INFO] [stderr]   Downloaded liblzma-sys v0.3.13
[INFO] [stderr]   Downloaded prepare_fasta v0.2.0
[INFO] [stderr]   Downloaded cf1-rs v0.5.1
[INFO] [stderr]   Downloaded seq-hash v0.2.0
[INFO] [stderr]   Downloaded simd-minimizers v3.0.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd
[INFO] running `Command { std: "docker" "start" "4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd" "/opt/rustwide/cargo-home/bin/cargo" "+d8df82673d5911b6112a85bf91d9adefb2c66a1a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd" "/opt/rustwide/cargo-home/bin/cargo" "+d8df82673d5911b6112a85bf91d9adefb2c66a1a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: explicit `package.readme` can be inferred
[INFO] [stderr]   --> Cargo.toml:54:1
[INFO] [stderr]    |
[INFO] [stderr] 54 | readme = "README.md"
[INFO] [stderr]    | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::manual_readme` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.readme`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:50:12
[INFO] [stderr]    |
[INFO] [stderr] 50 | homepage = "https://github.com/COMBINE-lab/piscem"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 55 | repository = "https://github.com/COMBINE-lab/piscem"
[INFO] [stderr]    |              ---------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `piscem` (manifest) generated 2 warnings
[INFO] [stderr]     Checking zlib-rs v0.6.7
[INFO] [stderr]    Compiling jobserver v0.1.35
[INFO] [stderr]    Compiling syn v3.0.4
[INFO] [stderr]    Compiling nix v0.30.1
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling enum-as-inner v0.6.1
[INFO] [stderr]     Checking combine v4.6.8
[INFO] [stderr]    Compiling mem_dbg-derive v0.3.4
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]     Checking getrandom v0.4.3
[INFO] [stderr]     Checking chacha20 v0.10.2
[INFO] [stderr]    Compiling serde v1.0.229
[INFO] [stderr]     Checking wyhash v0.5.0
[INFO] [stderr]    Compiling darling_core v0.21.3
[INFO] [stderr]    Compiling zerocopy-derive v0.8.56
[INFO] [stderr]    Compiling tracing-attributes v0.1.31
[INFO] [stderr]    Compiling cc v1.4.4
[INFO] [stderr]    Compiling serde_core v1.0.229
[INFO] [stderr]     Checking rand v0.10.2
[INFO] [stderr]     Checking crossbeam-channel v0.5.16
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]     Checking buffer-redux v1.1.0
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling prettyplease v0.3.0
[INFO] [stderr]     Checking rapidhash v1.4.0
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking dyn_size_of v0.4.5
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]     Checking seedable_hash v0.2.3
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]     Checking bitm v0.5.2
[INFO] [stderr]     Checking env_filter v2.0.0
[INFO] [stderr]    Compiling either v1.18.0
[INFO] [stderr]     Checking binout v0.3.2
[INFO] [stderr]     Checking xxhash-rust v0.8.18
[INFO] [stderr]     Checking libbz2-rs-sys v0.2.5
[INFO] [stderr]     Checking env_logger v0.11.11
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling impl-tools-lib v0.11.4
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking num-format v0.4.4
[INFO] [stderr]     Checking pluralizer v0.5.0
[INFO] [stderr]     Checking sysctl v0.6.0
[INFO] [stderr]     Checking bzip2 v0.6.1
[INFO] [stderr]    Compiling value-traits-derive v0.2.1
[INFO] [stderr]    Compiling epserde-derive v0.12.5
[INFO] [stderr]     Checking flate2 v1.1.10
[INFO] [stderr]    Compiling sealed v0.6.0
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling liblzma-sys v0.3.13
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]     Checking zerocopy v0.8.56
[INFO] [stderr]    Compiling psm v0.1.32
[INFO] [stderr]    Compiling stacker v0.1.25
[INFO] [stderr]     Checking voracious_radix_sort v1.2.0
[INFO] [stderr]     Checking liblzma v0.3.6
[INFO] [stderr]    Compiling lender-derive v0.1.3
[INFO] [stderr]     Checking sysinfo v0.36.1
[INFO] [stderr]     Checking partition v0.1.2
[INFO] [stderr]     Checking terminal_size v0.4.4
[INFO] [stderr]     Checking fallible-iterator v0.3.0
[INFO] [stderr]     Checking aliasable v0.1.3
[INFO] [stderr]     Checking clap_builder v4.6.6
[INFO] [stderr]     Checking stable_try_trait_v2 v1.75.1
[INFO] [stderr]     Checking maybe-dangling v0.1.2
[INFO] [stderr]     Checking arbitrary-chunks v0.4.1
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]     Checking rdst v0.20.14
[INFO] [stderr]    Compiling darling_macro v0.21.3
[INFO] [stderr]     Checking dsi-progress-logger v0.8.9
[INFO] [stderr]    Compiling ambassador v0.5.1
[INFO] [stderr]     Checking value-traits v0.2.1
[INFO] [stderr]    Compiling sha2-asm v0.6.4
[INFO] [stderr]     Checking lambert_w v1.2.34
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]    Compiling darling v0.21.3
[INFO] [stderr]     Checking thread-priority v3.1.1
[INFO] [stderr]    Compiling derive_setters v0.1.9
[INFO] [stderr]     Checking atomic-primitive v0.1.4
[INFO] [stderr]     Checking num-primitive v0.2.1
[INFO] [stderr]    Compiling portable-atomic v1.15.0
[INFO] [stderr]     Checking lender v0.6.2
[INFO] [stderr]     Checking ensure_simd v0.1.0
[INFO] [stderr]     Checking sync-cell-slice v0.9.14
[INFO] [stderr]     Checking ph-temp v0.12.0
[INFO] [stderr]     Checking bgzip v0.3.1
[INFO] [stderr]    Compiling impl-tools v0.11.4
[INFO] [stderr]     Checking bzip2 v0.5.2
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.49
[INFO] [stderr]     Checking rapidhash v4.5.1
[INFO] [stderr]     Checking ariadne v0.5.1
[INFO] [stderr]     Checking console v0.16.4
[INFO] [stderr]     Checking chumsky v0.12.0
[INFO] [stderr]     Checking tracing-subscriber v0.3.23
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]     Checking bzip2 v0.4.4
[INFO] [stderr]     Checking libz-rs-sys v0.6.7
[INFO] [stderr]     Checking num_cpus v1.17.0
[INFO] [stderr]     Checking cpu-time v1.0.0
[INFO] [stderr]     Checking itertools v0.15.0
[INFO] [stderr]     Checking unit-prefix v0.5.2
[INFO] [stderr]    Compiling derivative v2.2.0
[INFO] [stderr]     Checking hashbrown v0.14.5
[INFO] [stderr]     Checking sha2 v0.10.9
[INFO] [stderr]     Checking crossbeam v0.8.4
[INFO] [stderr]     Checking ph v0.11.0
[INFO] [stderr]     Checking indicatif v0.18.6
[INFO] [stderr]     Checking path-tools v0.1.0
[INFO] [stderr]    Compiling toml_datetime v0.6.11
[INFO] [stderr]    Compiling serde_spanned v0.6.9
[INFO] [stderr]    Compiling toml_edit v0.22.27
[INFO] [stderr]     Checking dashmap v6.2.1
[INFO] [stderr]     Checking mimalloc v0.1.52
[INFO] [stderr]    Compiling darling_core v0.24.1
[INFO] [stderr]    Compiling thiserror-impl v2.0.20
[INFO] [stderr]    Compiling bytemuck_derive v1.12.0
[INFO] [stderr]    Compiling clap_derive v4.6.4
[INFO] [stderr]    Compiling serde_derive v1.0.229
[INFO] [stderr]     Checking bytemuck v1.25.2
[INFO] [stderr]     Checking safe_arch v1.2.0
[INFO] [stderr]     Checking succinctly v0.6.0
[INFO] [stderr]     Checking thiserror v2.0.20
[INFO] [stderr]     Checking mmap-rs v0.7.0
[INFO] [stderr]     Checking clap v4.6.6
[INFO] [stderr]     Checking wide v1.7.0
[INFO] [stderr]     Checking mem_dbg v0.4.4
[INFO] [stderr]    Compiling darling_macro v0.24.1
[INFO] [stderr]    Compiling toml v0.8.23
[INFO] [stderr]    Compiling darling v0.24.1
[INFO] [stderr]    Compiling bon-macros v3.10.0
[INFO] [stderr]     Checking ahash v0.8.12
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]     Checking epserde v0.12.6
[INFO] [stderr]    Compiling piscem v0.23.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking needletail v0.7.3
[INFO] [stderr]     Checking niffler v3.0.0
[INFO] [stderr]     Checking needletail v0.6.3
[INFO] [stderr]     Checking paraseq-temp v0.5.0-pre.2
[INFO] [stderr]     Checking prepare_fasta v0.2.0
[INFO] [stderr]     Checking thread-broker v0.1.0
[INFO] [stderr]     Checking seq_geom_parser v1.1.0
[INFO] [stderr]     Checking sux v0.14.0
[INFO] [stderr]     Checking bon v3.10.0
[INFO] [stderr]     Checking rapidgzip-core v0.3.1
[INFO] [stderr]     Checking packed-seq v5.0.0
[INFO] [stderr]     Checking seq-hash v0.2.0
[INFO] [stderr]     Checking simd-minimizers v3.0.0
[INFO] [stderr]     Checking cf1-rs v0.5.1
[INFO] [stderr]     Checking sshash-lib v0.7.1
[INFO] [stderr]     Checking tiny-dict v0.7.1
[INFO] [stderr]     Checking piscem-rs v0.10.0
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 56.29s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 3`
[INFO] running `Command { std: "docker" "inspect" "4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd", kill_on_drop: false }`
[INFO] [stdout] 4f741375dfe9ca9b6090985762086602ef69c8fee96e239eb602861225a55efd
