[INFO] cloning repository https://github.com/OscarAspelin95/bam_rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/OscarAspelin95/bam_rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fbam_rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fbam_rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 40398d322e4be1de2deb9c5d1a5c81f9a27a5482
[INFO] checking OscarAspelin95/bam_rs against 4fcf39725a9c99bd495d8c73af83628a256ff9a9 for pr-162233-crater-rollup
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fbam_rs" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/OscarAspelin95/bam_rs
[INFO] finished tweaking git repo https://github.com/OscarAspelin95/bam_rs
[INFO] tweaked toml for git repo https://github.com/OscarAspelin95/bam_rs written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/OscarAspelin95/bam_rs on toolchain 4fcf39725a9c99bd495d8c73af83628a256ff9a9
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4fcf39725a9c99bd495d8c73af83628a256ff9a9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/OscarAspelin95/bam_rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4fcf39725a9c99bd495d8c73af83628a256ff9a9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: binary `bam_rs` should have a kebab-case name
[INFO] [stderr]    |
[INFO] [stderr]  1 | /workspace/builds/worker-2-tc1/source/target/.../bam_rs
[INFO] [stderr]    |                                                  ^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::non_kebab_case_bins` is set to `warn` by default
[INFO] [stderr] help: to change the binary name to `bam-rs`, convert `package.name`
[INFO] [stderr]   --> Cargo.toml:17:8
[INFO] [stderr]    |
[INFO] [stderr] 17 - name = "bam_rs"
[INFO] [stderr] 17 + name = "bam-rs"
[INFO] [stderr]    |
[INFO] [stderr] help: to change the binary name to `bam-rs`, specify `bin.name`
[INFO] [stderr]   --> Cargo.toml:18:19
[INFO] [stderr]    |
[INFO] [stderr] 18 ~ version = "0.0.1"
[INFO] [stderr] 19 + [[bin]]
[INFO] [stderr] 20 + name = "bam-rs"
[INFO] [stderr] 21 + path = "src/main.rs"
[INFO] [stderr]    |
[INFO] [stderr] warning: `bam_rs` (manifest) generated 1 warning
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded zerofrom v0.1.7
[INFO] [stderr]   Downloaded simple_logger v5.2.0
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded relative-path v1.9.3
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded rstest v0.26.1
[INFO] [stderr]   Downloaded clap v4.6.4
[INFO] [stderr]   Downloaded openssl-sys v0.9.114
[INFO] [stderr]   Downloaded rstest_macros v0.26.1
[INFO] [stderr]   Downloaded toml_edit v0.25.11+spec-1.1.0
[INFO] [stderr]   Downloaded rust-htslib v1.0.1
[INFO] [stderr]   Downloaded clap_builder v4.6.2
[INFO] [stderr]   Downloaded bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]   Downloaded libc v0.2.185
[INFO] [stderr]   Downloaded libz-sys v1.1.28
[INFO] [stderr]   Downloaded curl-sys v0.4.87+curl-8.19.0
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v300.6.0+3.6.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f
[INFO] running `Command { std: "docker" "start" "22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f" "/opt/rustwide/cargo-home/bin/cargo" "+4fcf39725a9c99bd495d8c73af83628a256ff9a9" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f" "/opt/rustwide/cargo-home/bin/cargo" "+4fcf39725a9c99bd495d8c73af83628a256ff9a9" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: binary `bam_rs` should have a kebab-case name
[INFO] [stderr]    |
[INFO] [stderr]  1 | /opt/rustwide/target/.../bam_rs
[INFO] [stderr]    |                          ^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::non_kebab_case_bins` is set to `warn` by default
[INFO] [stderr] help: to change the binary name to `bam-rs`, convert `package.name`
[INFO] [stderr]   --> Cargo.toml:17:8
[INFO] [stderr]    |
[INFO] [stderr] 17 - name = "bam_rs"
[INFO] [stderr] 17 + name = "bam-rs"
[INFO] [stderr]    |
[INFO] [stderr] help: to change the binary name to `bam-rs`, specify `bin.name`
[INFO] [stderr]   --> Cargo.toml:18:19
[INFO] [stderr]    |
[INFO] [stderr] 18 ~ version = "0.0.1"
[INFO] [stderr] 19 + [[bin]]
[INFO] [stderr] 20 + name = "bam-rs"
[INFO] [stderr] 21 + path = "src/main.rs"
[INFO] [stderr]    |
[INFO] [stderr] warning: `bam_rs` (manifest) generated 1 warning
[INFO] [stderr]    Compiling libc v0.2.185
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling winnow v1.0.1
[INFO] [stderr]    Compiling cc v1.2.60
[INFO] [stderr]     Checking utf8parse v0.2.2
[INFO] [stderr]    Compiling hashbrown v0.17.0
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]     Checking anstyle-parse v1.0.0
[INFO] [stderr]    Compiling cmake v0.1.58
[INFO] [stderr]    Compiling openssl-src v300.6.0+3.6.2
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling toml_parser v1.1.2+spec-1.1.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling openssl-sys v0.9.114
[INFO] [stderr]    Compiling libz-sys v1.1.28
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling curl-sys v0.4.87+curl-8.19.0
[INFO] [stderr]     Checking colorchoice v1.0.5
[INFO] [stderr]    Compiling time-core v0.1.8
[INFO] [stderr]     Checking anstyle v1.0.14
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]     Checking percent-encoding v2.3.2
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.2
[INFO] [stderr]     Checking anstyle-query v1.1.5
[INFO] [stderr]    Compiling num-conv v0.2.1
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling toml_edit v0.25.11+spec-1.1.0
[INFO] [stderr]    Compiling time-macros v0.2.27
[INFO] [stderr]     Checking anstream v1.0.0
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]     Checking zerofrom v0.1.7
[INFO] [stderr]     Checking yoke v0.8.2
[INFO] [stderr]     Checking deranged v0.5.8
[INFO] [stderr]     Checking zerovec v0.11.6
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]    Compiling rstest_macros v0.26.1
[INFO] [stderr]    Compiling syn v3.0.3
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking potential_utf v0.1.5
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking strsim v0.11.1
[INFO] [stderr]     Checking clap_lex v1.1.0
[INFO] [stderr]     Checking num_threads v0.1.7
[INFO] [stderr]     Checking clap_builder v4.6.2
[INFO] [stderr]     Checking time v0.3.47
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking thiserror v2.0.18
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling futures-macro v0.3.32
[INFO] [stderr]    Compiling proc-macro-crate v3.5.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling relative-path v1.9.3
[INFO] [stderr]     Checking futures-core v0.3.32
[INFO] [stderr]     Checking log v0.4.33
[INFO] [stderr]     Checking colored v3.1.1
[INFO] [stderr]     Checking slab v0.4.12
[INFO] [stderr]     Checking idna_adapter v1.2.1
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]     Checking simple_logger v5.2.0
[INFO] [stderr]     Checking futures-timer v3.0.3
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling clap_derive v4.6.4
[INFO] [stderr]     Checking rstest v0.26.1
[INFO] [stderr]     Checking clap v4.6.4
[ERROR] error running command: no output for 300 seconds
[INFO] running `Command { std: "docker" "inspect" "22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f", kill_on_drop: false }`
[INFO] [stdout] 22530f667b3b32b2f521b7bfb5c92fd5f3bc0b6f0763e5d4164d84040469ab4f
