[INFO] cloning repository https://github.com/broadinstitute/gnomad-lr
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/broadinstitute/gnomad-lr" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fgnomad-lr", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fgnomad-lr'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4d38525fba925b0956b94e484bc03a600a75c5d1
[INFO] checking broadinstitute/gnomad-lr against bd72bf234a6bb5da5aa1550a318f391e3fbad54f for pr-161319
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fgnomad-lr" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-1-tc2/source/.cargo/config.toml
[INFO] started tweaking git repo https://github.com/broadinstitute/gnomad-lr
[INFO] finished tweaking git repo https://github.com/broadinstitute/gnomad-lr
[INFO] tweaked toml for git repo https://github.com/broadinstitute/gnomad-lr written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/broadinstitute/gnomad-lr on toolchain bd72bf234a6bb5da5aa1550a318f391e3fbad54f
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+bd72bf234a6bb5da5aa1550a318f391e3fbad54f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/broadinstitute/gnomad-lr already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+bd72bf234a6bb5da5aa1550a318f391e3fbad54f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129
[INFO] running `Command { std: "docker" "start" "98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129" "/opt/rustwide/cargo-home/bin/cargo" "+bd72bf234a6bb5da5aa1550a318f391e3fbad54f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129" "/opt/rustwide/cargo-home/bin/cargo" "+bd72bf234a6bb5da5aa1550a318f391e3fbad54f" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]     Checking memchr v2.8.1
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling zerocopy v0.8.49
[INFO] [stderr]     Checking hashbrown v0.17.1
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]     Checking socket2 v0.6.4
[INFO] [stderr]     Checking mio v1.2.1
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling zerocopy-derive v0.8.49
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]    Compiling displaydoc v0.2.6
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]     Checking arrow-schema v53.4.1
[INFO] [stderr]     Checking http v1.4.1
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]    Compiling serde_json v1.0.150
[INFO] [stderr]     Checking rustls-pki-types v1.14.1
[INFO] [stderr]     Checking simd-adler32 v0.3.9
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]     Checking tokio v1.52.3
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking http v0.2.12
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling rustls v0.23.40
[INFO] [stderr]    Compiling rustls v0.21.12
[INFO] [stderr]     Checking serde_urlencoded v0.7.1
[INFO] [stderr]     Checking indexmap v2.14.0
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]     Checking http-body v1.0.1
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking http-body-util v0.1.3
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]    Compiling flatbuffers v24.12.23
[INFO] [stderr]     Checking either v1.16.0
[INFO] [stderr]     Checking noodles-bgzf v0.36.0
[INFO] [stderr]     Checking http-body v0.4.6
[INFO] [stderr]     Checking uuid v1.23.2
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]    Compiling cc v1.2.63
[INFO] [stderr]     Checking crossbeam-deque v0.8.6
[INFO] [stderr]     Checking socket2 v0.5.10
[INFO] [stderr]     Checking alloc-no-stdlib v2.0.4
[INFO] [stderr]    Compiling zstd-safe v7.2.1
[INFO] [stderr]     Checking typenum v1.20.1
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]     Checking rustls-native-certs v0.8.3
[INFO] [stderr]     Checking event-listener v5.4.1
[INFO] [stderr]     Checking noodles-core v0.16.0
[INFO] [stderr]     Checking alloc-stdlib v0.2.2
[INFO] [stderr]     Checking rayon-core v1.13.0
[INFO] [stderr]     Checking csv-core v0.1.13
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]     Checking noodles-csi v0.44.0
[INFO] [stderr]     Checking bitflags v2.11.1
[INFO] [stderr]     Checking borrow-or-share v0.2.4
[INFO] [stderr]     Checking event-listener-strategy v0.5.4
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]     Checking fluent-uri v0.3.2
[INFO] [stderr]     Checking brotli-decompressor v4.0.3
[INFO] [stderr]    Compiling snafu-derive v0.8.9
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking outref v0.5.2
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking chrono v0.4.39
[INFO] [stderr]     Checking atoi v2.0.0
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]     Checking noodles-tabix v0.50.0
[INFO] [stderr]     Checking num-bigint v0.4.6
[INFO] [stderr]     Checking num-iter v0.1.45
[INFO] [stderr]     Checking ordered-float v2.10.1
[INFO] [stderr]     Checking integer-encoding v3.0.4
[INFO] [stderr]     Checking twox-hash v2.1.2
[INFO] [stderr]     Checking webpki-roots v0.25.4
[INFO] [stderr]     Checking unicode-width v0.2.2
[INFO] [stderr]     Checking static_assertions v1.1.0
[INFO] [stderr]     Checking vsimd v0.8.0
[INFO] [stderr]     Checking twox-hash v1.6.3
[INFO] [stderr]     Checking thrift v0.17.0
[INFO] [stderr]     Checking console v0.15.11
[INFO] [stderr]     Checking generic-array v0.14.7
[INFO] [stderr]     Checking lz4_flex v0.11.6
[INFO] [stderr]     Checking brotli v7.0.0
[INFO] [stderr]     Checking noodles-vcf v0.74.0
[INFO] [stderr]     Checking uuid-simd v0.8.0
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr] error: could not compile `tokio` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/bd72bf234a6bb5da5aa1550a318f391e3fbad54f/bin/rustc --crate-name tokio --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/tokio-1.52.3/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="bytes"' --cfg 'feature="default"' --cfg 'feature="fs"' --cfg 'feature="io-util"' --cfg 'feature="libc"' --cfg 'feature="macros"' --cfg 'feature="mio"' --cfg 'feature="net"' --cfg 'feature="process"' --cfg 'feature="rt"' --cfg 'feature="rt-multi-thread"' --cfg 'feature="signal"' --cfg 'feature="signal-hook-registry"' --cfg 'feature="socket2"' --cfg 'feature="sync"' --cfg 'feature="time"' --cfg 'feature="tokio-macros"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("bytes", "default", "fs", "full", "io-std", "io-uring", "io-util", "libc", "macros", "mio", "net", "parking_lot", "process", "rt", "rt-multi-thread", "signal", "signal-hook-registry", "socket2", "sync", "taskdump", "test-util", "time", "tokio-macros", "tracing", "windows-sys"))' -C metadata=e301da97fdcd93fb -C extra-filename=-e06eaa9f71f5aab3 --out-dir /opt/rustwide/target/debug/build/tokio/e06eaa9f71f5aab3/out -L dependency=/opt/rustwide/target/debug/build/bytes/c3c82aecfaa31497/out -L dependency=/opt/rustwide/target/debug/build/errno/0997ff084336fcdf/out -L dependency=/opt/rustwide/target/debug/build/libc/7d2af120e89c619c/out -L dependency=/opt/rustwide/target/debug/build/mio/24357868ea6ec5f7/out -L dependency=/opt/rustwide/target/debug/build/pin-project-lite/7176d3be2b7ee2e1/out -L dependency=/opt/rustwide/target/debug/build/signal-hook-registry/11629a25a8623d3d/out -L dependency=/opt/rustwide/target/debug/build/socket2/dfdbce0a7bcef759/out -L dependency=/opt/rustwide/target/debug/build/tokio-macros/08b96a339cb6ecf1/out --extern bytes=/opt/rustwide/target/debug/build/bytes/c3c82aecfaa31497/out/libbytes-c3c82aecfaa31497.rmeta --extern libc=/opt/rustwide/target/debug/build/libc/7d2af120e89c619c/out/liblibc-7d2af120e89c619c.rmeta --extern mio=/opt/rustwide/target/debug/build/mio/24357868ea6ec5f7/out/libmio-24357868ea6ec5f7.rmeta --extern pin_project_lite=/opt/rustwide/target/debug/build/pin-project-lite/7176d3be2b7ee2e1/out/libpin_project_lite-7176d3be2b7ee2e1.rmeta --extern signal_hook_registry=/opt/rustwide/target/debug/build/signal-hook-registry/11629a25a8623d3d/out/libsignal_hook_registry-11629a25a8623d3d.rmeta --extern socket2=/opt/rustwide/target/debug/build/socket2/dfdbce0a7bcef759/out/libsocket2-dfdbce0a7bcef759.rmeta --extern tokio_macros=/opt/rustwide/target/debug/build/tokio-macros/08b96a339cb6ecf1/out/libtokio_macros-08b96a339cb6ecf1.so --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129", kill_on_drop: false }`
[INFO] [stdout] 98e5de7b336054648c7b9ccb2d7732b390cb247e528c785f6c6ac11965fb9129