[INFO] cloning repository https://github.com/broadinstitute/gnomad-lr
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/broadinstitute/gnomad-lr" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fgnomad-lr", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fgnomad-lr'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4d38525fba925b0956b94e484bc03a600a75c5d1
[INFO] checking broadinstitute/gnomad-lr against e7769602aca3770e8d8ea55716becb22e839a579 for pr-161253
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fgnomad-lr" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-0-tc1/source/.cargo/config.toml
[INFO] started tweaking git repo https://github.com/broadinstitute/gnomad-lr
[INFO] finished tweaking git repo https://github.com/broadinstitute/gnomad-lr
[INFO] tweaked toml for git repo https://github.com/broadinstitute/gnomad-lr written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/broadinstitute/gnomad-lr on toolchain e7769602aca3770e8d8ea55716becb22e839a579
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e7769602aca3770e8d8ea55716becb22e839a579" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/broadinstitute/gnomad-lr already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e7769602aca3770e8d8ea55716becb22e839a579" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/broadinstitute/genohype.git`
[INFO] [stderr]  Downloading crates ...
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[INFO] [stderr]   Downloaded object_store v0.11.2
[INFO] [stderr]   Downloaded zerocopy v0.8.49
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5
[INFO] running `Command { std: "docker" "start" "2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5" "/opt/rustwide/cargo-home/bin/cargo" "+e7769602aca3770e8d8ea55716becb22e839a579" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5" "/opt/rustwide/cargo-home/bin/cargo" "+e7769602aca3770e8d8ea55716becb22e839a579" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]     Checking memchr v2.8.1
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling shlex v2.0.1
[INFO] [stderr]    Compiling zerocopy v0.8.49
[INFO] [stderr]    Compiling num-traits v0.2.19
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[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]     Checking log v0.4.30
[INFO] [stderr]    Compiling tokio-macros v2.7.0
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
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[INFO] [stderr]    Compiling futures-macro v0.3.32
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[INFO] [stderr]     Checking noodles-tabix v0.50.0
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]    Compiling zstd-sys v2.0.13+zstd.1.5.6
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[INFO] [stderr]     Checking chrono v0.4.39
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[INFO] [stderr]     Checking idna_adapter v1.2.2
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[INFO] [stderr] error: could not compile `zerocopy` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/e7769602aca3770e8d8ea55716becb22e839a579/bin/rustc --crate-name zerocopy --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/zerocopy-0.8.49/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="derive"' --cfg 'feature="simd"' --cfg 'feature="zerocopy-derive"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("__internal_use_only_features_that_work_on_stable", "alloc", "derive", "float-nightly", "simd", "simd-nightly", "std", "zerocopy-derive"))' -C metadata=78f2298b9a7bf80a -C extra-filename=-859e7c45290fba2f --out-dir /opt/rustwide/target/debug/build/zerocopy/859e7c45290fba2f/out -L dependency=/opt/rustwide/target/debug/build/zerocopy-derive/5a916a7e0e902428/out --extern zerocopy_derive=/opt/rustwide/target/debug/build/zerocopy-derive/5a916a7e0e902428/out/libzerocopy_derive-5a916a7e0e902428.so --cap-lints allow --cap-lints=forbid --check-cfg 'cfg(no_zerocopy_simd_x86_avx12_1_89_0)' --check-cfg 'cfg(rust, values("1.89.0"))' --check-cfg 'cfg(no_zerocopy_core_error_1_81_0)' --check-cfg 'cfg(rust, values("1.81.0"))' --check-cfg 'cfg(no_zerocopy_diagnostic_on_unimplemented_1_78_0)' --check-cfg 'cfg(rust, values("1.78.0"))' --check-cfg 'cfg(no_zerocopy_generic_bounds_in_const_fn_1_61_0)' --check-cfg 'cfg(rust, values("1.61.0"))' --check-cfg 'cfg(no_zerocopy_target_has_atomics_1_60_0)' --check-cfg 'cfg(rust, values("1.60.0"))' --check-cfg 'cfg(no_zerocopy_aarch64_simd_1_59_0)' --check-cfg 'cfg(rust, values("1.59.0"))' --check-cfg 'cfg(no_zerocopy_aarch64_simd_be_1_87_0)' --check-cfg 'cfg(rust, values("1.87.0"))' --check-cfg 'cfg(no_zerocopy_panic_in_const_and_vec_try_reserve_1_57_0)' --check-cfg 'cfg(rust, values("1.57.0"))' --check-cfg 'cfg(doc_cfg)' --check-cfg 'cfg(kani)' --check-cfg 'cfg(__ZEROCOPY_INTERNAL_USE_ONLY_NIGHTLY_FEATURES_IN_TESTS)' --check-cfg 'cfg(__ZEROCOPY_INTERNAL_USE_ONLY_DEV_MODE)' --check-cfg 'cfg(coverage_nightly)' --check-cfg 'cfg(zerocopy_inline_always)' --check-cfg 'cfg(zerocopy_unstable_ptr)'` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `tokio` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/e7769602aca3770e8d8ea55716becb22e839a579/bin/rustc --crate-name tokio --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/tokio-1.52.3/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="bytes"' --cfg 'feature="default"' --cfg 'feature="fs"' --cfg 'feature="io-util"' --cfg 'feature="libc"' --cfg 'feature="macros"' --cfg 'feature="mio"' --cfg 'feature="net"' --cfg 'feature="process"' --cfg 'feature="rt"' --cfg 'feature="rt-multi-thread"' --cfg 'feature="signal"' --cfg 'feature="signal-hook-registry"' --cfg 'feature="socket2"' --cfg 'feature="sync"' --cfg 'feature="time"' --cfg 'feature="tokio-macros"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("bytes", "default", "fs", "full", "io-std", "io-uring", "io-util", "libc", "macros", "mio", "net", "parking_lot", "process", "rt", "rt-multi-thread", "signal", "signal-hook-registry", "socket2", "sync", "taskdump", "test-util", "time", "tokio-macros", "tracing", "windows-sys"))' -C metadata=e301da97fdcd93fb -C extra-filename=-e06eaa9f71f5aab3 --out-dir /opt/rustwide/target/debug/build/tokio/e06eaa9f71f5aab3/out -L dependency=/opt/rustwide/target/debug/build/bytes/c3c82aecfaa31497/out -L dependency=/opt/rustwide/target/debug/build/errno/0997ff084336fcdf/out -L dependency=/opt/rustwide/target/debug/build/libc/7d2af120e89c619c/out -L dependency=/opt/rustwide/target/debug/build/mio/24357868ea6ec5f7/out -L dependency=/opt/rustwide/target/debug/build/pin-project-lite/7176d3be2b7ee2e1/out -L dependency=/opt/rustwide/target/debug/build/signal-hook-registry/11629a25a8623d3d/out -L dependency=/opt/rustwide/target/debug/build/socket2/dfdbce0a7bcef759/out -L dependency=/opt/rustwide/target/debug/build/tokio-macros/08b96a339cb6ecf1/out --extern bytes=/opt/rustwide/target/debug/build/bytes/c3c82aecfaa31497/out/libbytes-c3c82aecfaa31497.rmeta --extern libc=/opt/rustwide/target/debug/build/libc/7d2af120e89c619c/out/liblibc-7d2af120e89c619c.rmeta --extern mio=/opt/rustwide/target/debug/build/mio/24357868ea6ec5f7/out/libmio-24357868ea6ec5f7.rmeta --extern pin_project_lite=/opt/rustwide/target/debug/build/pin-project-lite/7176d3be2b7ee2e1/out/libpin_project_lite-7176d3be2b7ee2e1.rmeta --extern signal_hook_registry=/opt/rustwide/target/debug/build/signal-hook-registry/11629a25a8623d3d/out/libsignal_hook_registry-11629a25a8623d3d.rmeta --extern socket2=/opt/rustwide/target/debug/build/socket2/dfdbce0a7bcef759/out/libsocket2-dfdbce0a7bcef759.rmeta --extern tokio_macros=/opt/rustwide/target/debug/build/tokio-macros/08b96a339cb6ecf1/out/libtokio_macros-08b96a339cb6ecf1.so --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5", kill_on_drop: false }`
[INFO] [stdout] 2e1362d341389e3cf977a4e0c8bd64048ab3f3f6009572cfb0f30391bafb82f5