[INFO] cloning repository https://github.com/smartsbio/smarts-bio-cli
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/smartsbio/smarts-bio-cli" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsmartsbio%2Fsmarts-bio-cli", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsmartsbio%2Fsmarts-bio-cli'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ec15cd86f2d11ab49af1fd2db874b74f453954a8
[INFO] checking smartsbio/smarts-bio-cli against 49a6044d37d694890450f52ceaceb66277a36b1e for pr-161154
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsmartsbio%2Fsmarts-bio-cli" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/smartsbio/smarts-bio-cli
[INFO] finished tweaking git repo https://github.com/smartsbio/smarts-bio-cli
[INFO] tweaked toml for git repo https://github.com/smartsbio/smarts-bio-cli written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/smartsbio/smarts-bio-cli on toolchain 49a6044d37d694890450f52ceaceb66277a36b1e
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+49a6044d37d694890450f52ceaceb66277a36b1e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/smartsbio/smarts-bio-cli already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+49a6044d37d694890450f52ceaceb66277a36b1e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:8683fc1fc2eb5c9ac98e0d076ab094b2ffac7f99da555d2b6a2e27f346de2ec7" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38
[INFO] running `Command { std: "docker" "start" "62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38" "/opt/rustwide/cargo-home/bin/cargo" "+49a6044d37d694890450f52ceaceb66277a36b1e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38" "/opt/rustwide/cargo-home/bin/cargo" "+49a6044d37d694890450f52ceaceb66277a36b1e" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]     Checking pin-project-lite v0.2.17
[INFO] [stderr]     Checking futures-core v0.3.32
[INFO] [stderr]    Compiling autocfg v1.5.1
[INFO] [stderr]     Checking futures-io v0.3.32
[INFO] [stderr]     Checking smallvec v1.15.2
[INFO] [stderr]     Checking bitflags v2.13.0
[INFO] [stderr]     Checking memchr v2.8.2
[INFO] [stderr]     Checking futures-sink v0.3.32
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]     Checking slab v0.4.12
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]     Checking parking v2.2.1
[INFO] [stderr]     Checking linux-raw-sys v0.12.1
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]    Compiling displaydoc v0.2.6
[INFO] [stderr]     Checking once_cell v1.21.4
[INFO] [stderr]     Checking bytes v1.11.1
[INFO] [stderr]    Compiling futures-macro v0.3.32
[INFO] [stderr]     Checking futures-channel v0.3.32
[INFO] [stderr]     Checking futures-task v0.3.32
[INFO] [stderr]     Checking itoa v1.0.18
[INFO] [stderr]    Compiling tokio-macros v2.7.0
[INFO] [stderr]    Compiling shlex v2.0.1
[INFO] [stderr]     Checking writeable v0.6.3
[INFO] [stderr]    Compiling winnow v1.0.3
[INFO] [stderr]     Checking litemap v0.8.2
[INFO] [stderr]    Compiling hashbrown v0.17.1
[INFO] [stderr]    Compiling cc v1.2.63
[INFO] [stderr]    Compiling toml_datetime v1.1.1+spec-1.1.0
[INFO] [stderr]     Checking concurrent-queue v2.5.0
[INFO] [stderr]    Compiling zmij v1.0.21
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking event-listener v5.4.1
[INFO] [stderr]     Checking fastrand v2.4.1
[INFO] [stderr]    Compiling icu_properties_data v2.2.0
[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
[INFO] [stderr]     Checking tracing-core v0.1.36
[INFO] [stderr]    Compiling tracing-attributes v0.1.31
[INFO] [stderr]    Compiling zerocopy v0.8.52
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]     Checking http v1.4.2
[INFO] [stderr]     Checking futures-lite v2.6.1
[INFO] [stderr]     Checking event-listener-strategy v0.5.4
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling zvariant_utils v2.1.0
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]     Checking rustls-pki-types v1.14.1
[INFO] [stderr]    Compiling memoffset v0.9.1
[INFO] [stderr]    Compiling enumflags2_derive v0.7.12
[INFO] [stderr]     Checking block-padding v0.3.3
[INFO] [stderr]     Checking async-task v4.7.1
[INFO] [stderr]    Compiling nix v0.29.0
[INFO] [stderr]     Checking inout v0.1.4
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking async-channel v2.5.0
[INFO] [stderr]     Checking piper v0.2.5
[INFO] [stderr]     Checking http-body v1.0.1
[INFO] [stderr]    Compiling async-io v2.6.0
[INFO] [stderr]    Compiling rustls v0.23.40
[INFO] [stderr]    Compiling toml_parser v1.1.2+spec-1.1.0
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]     Checking errno v0.3.14
[INFO] [stderr]     Checking socket2 v0.6.4
[INFO] [stderr]     Checking mio v1.2.1
[INFO] [stderr]     Checking signal-hook-registry v1.4.8
[INFO] [stderr]     Checking endi v1.1.1
[INFO] [stderr]     Checking log v0.4.32
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling serde_json v1.0.150
[INFO] [stderr]     Checking blocking v1.6.2
[INFO] [stderr]     Checking zerofrom v0.1.8
[INFO] [stderr]     Checking num-bigint v0.4.6
[INFO] [stderr]    Compiling toml_edit v0.25.12+spec-1.1.0
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]     Checking cipher v0.4.4
[INFO] [stderr]     Checking yoke v0.8.3
[INFO] [stderr]     Checking async-lock v3.4.2
[INFO] [stderr]    Compiling async-trait v0.1.89
[INFO] [stderr]    Compiling unicase v2.9.0
[INFO] [stderr]     Checking xdg-home v1.3.0
[INFO] [stderr]     Checking tokio v1.52.3
[INFO] [stderr]    Compiling mime_guess v2.0.5
[INFO] [stderr]     Checking zerovec v0.11.6
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]     Checking num-iter v0.1.45
[INFO] [stderr]     Checking async-executor v1.14.0
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]    Compiling proc-macro-crate v3.5.0
[INFO] [stderr]     Checking async-fs v2.2.0
[INFO] [stderr]     Checking sha1 v0.10.6
[INFO] [stderr]     Checking hmac v0.12.1
[INFO] [stderr]     Checking async-broadcast v0.7.2
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking sync_wrapper v1.0.2
[INFO] [stderr]     Checking ordered-stream v0.2.0
[INFO] [stderr]    Compiling serde_repr v0.1.20
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking potential_utf v0.1.5
[INFO] [stderr]     Checking ipnet v2.12.0
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling darling_core v0.21.3
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking hkdf v0.12.4
[INFO] [stderr]     Checking num v0.4.3
[INFO] [stderr]    Compiling zvariant_derive v4.2.0
[INFO] [stderr]    Compiling zbus_macros v4.4.0
[INFO] [stderr]     Checking aes v0.8.4
[INFO] [stderr]     Checking cbc v0.1.2
[INFO] [stderr]     Checking sha2 v0.10.9
[INFO] [stderr]     Checking webpki-roots v1.0.7
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling ref-cast v1.0.25
[INFO] [stderr]     Checking winnow v0.7.15
[INFO] [stderr]     Checking ryu v1.0.23
[INFO] [stderr]     Checking dirs-sys v0.4.1
[INFO] [stderr]     Checking http-body-util v0.1.3
[INFO] [stderr]    Compiling ref-cast-impl v1.0.25
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]    Compiling serde_derive_internals v0.29.1
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]     Checking iana-time-zone v0.1.65
[INFO] [stderr]     Checking directories v5.0.1
[INFO] [stderr]     Checking futures-executor v0.3.32
[INFO] [stderr]    Compiling anyhow v1.0.102
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]     Checking futures v0.3.32
[INFO] [stderr]    Compiling nix v0.28.0
[INFO] [stderr]     Checking enumflags2 v0.7.12
[INFO] [stderr]     Checking serde_spanned v0.6.9
[INFO] [stderr]     Checking toml_datetime v0.6.11
[INFO] [stderr]     Checking serde_urlencoded v0.7.1
[INFO] [stderr]     Checking zvariant v4.2.0
[INFO] [stderr]    Compiling schemars_derive v1.2.1
[INFO] [stderr]     Checking chrono v0.4.45
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]    Compiling portable-atomic v1.13.1
[INFO] [stderr]     Checking thiserror v2.0.18
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]    Compiling document-features v0.2.12
[INFO] [stderr]     Checking nibble_vec v0.1.0
[INFO] [stderr]     Checking unicode-segmentation v1.13.3
[INFO] [stderr]     Checking endian-type v0.1.2
[INFO] [stderr]    Compiling clap_derive v4.6.1
[INFO] [stderr]     Checking radix_trie v0.2.1
[INFO] [stderr]     Checking idna_adapter v1.2.2
[INFO] [stderr]     Checking toml_edit v0.22.27
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking console v0.15.11
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr] error: could not compile `rustix` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/49a6044d37d694890450f52ceaceb66277a36b1e/bin/rustc --crate-name rustix --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/rustix-1.1.4/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="alloc"' --cfg 'feature="default"' --cfg 'feature="event"' --cfg 'feature="fs"' --cfg 'feature="net"' --cfg 'feature="pipe"' --cfg 'feature="process"' --cfg 'feature="std"' --cfg 'feature="stdio"' --cfg 'feature="termios"' --cfg 'feature="time"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("all-apis", "alloc", "core", "default", "event", "fs", "io_uring", "libc", "libc_errno", "linux_4_11", "linux_5_1", "linux_5_11", "linux_latest", "mm", "mount", "net", "param", "pipe", "process", "pty", "rand", "runtime", "rustc-dep-of-std", "rustc-std-workspace-alloc", "shm", "std", "stdio", "system", "termios", "thread", "time", "try_close", "use-explicitly-provided-auxv", "use-libc", "use-libc-auxv"))' -C metadata=74481162d5d033f7 -C extra-filename=-da97bd6685cff52d --out-dir /opt/rustwide/target/debug/build/rustix/da97bd6685cff52d/out -L dependency=/opt/rustwide/target/debug/build/bitflags/42a213aab8397fad/out -L dependency=/opt/rustwide/target/debug/build/linux-raw-sys/d4bc5dcbcaabc690/out --extern bitflags=/opt/rustwide/target/debug/build/bitflags/42a213aab8397fad/out/libbitflags-42a213aab8397fad.rmeta --extern linux_raw_sys=/opt/rustwide/target/debug/build/linux-raw-sys/d4bc5dcbcaabc690/out/liblinux_raw_sys-d4bc5dcbcaabc690.rmeta --cap-lints allow --cap-lints=forbid --cfg static_assertions --cfg lower_upper_exp_for_non_zero --cfg rustc_diagnostics --cfg linux_raw_dep --cfg linux_raw --cfg linux_like --cfg linux_kernel` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38", kill_on_drop: false }`
[INFO] [stdout] 62b99e9e3dbd4ac2897953c2edf6c2d12b12037e98028931d20d7ece04fc5a38
