[INFO] cloning repository https://github.com/moozoo64/bam_mcp_server
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/moozoo64/bam_mcp_server" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmoozoo64%2Fbam_mcp_server", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmoozoo64%2Fbam_mcp_server'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] e861bbe9b9b07024a0229f7f6482fe84e83438ac
[INFO] checking moozoo64/bam_mcp_server against c999cef531ea9059e189e82fe0e82c5daf249bc9 for pr-160904
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmoozoo64%2Fbam_mcp_server" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/moozoo64/bam_mcp_server
[INFO] finished tweaking git repo https://github.com/moozoo64/bam_mcp_server
[INFO] tweaked toml for git repo https://github.com/moozoo64/bam_mcp_server written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/moozoo64/bam_mcp_server on toolchain c999cef531ea9059e189e82fe0e82c5daf249bc9
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c999cef531ea9059e189e82fe0e82c5daf249bc9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/moozoo64/bam_mcp_server already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c999cef531ea9059e189e82fe0e82c5daf249bc9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rmcp-macros v1.5.0
[INFO] [stderr]   Downloaded noodles v0.109.0
[INFO] [stderr]   Downloaded pastey v0.2.1
[INFO] [stderr]   Downloaded sse-stream v0.2.2
[INFO] [stderr]   Downloaded noodles-core v0.19.0
[INFO] [stderr]   Downloaded alloca v0.4.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.46.0
[INFO] [stderr]   Downloaded lexical-core v1.0.6
[INFO] [stderr]   Downloaded lexical-parse-integer v1.0.6
[INFO] [stderr]   Downloaded noodles-fasta v0.60.0
[INFO] [stderr]   Downloaded criterion-plot v0.8.2
[INFO] [stderr]   Downloaded noodles-csi v0.55.0
[INFO] [stderr]   Downloaded lexical-write-integer v1.0.6
[INFO] [stderr]   Downloaded noodles-bam v0.88.0
[INFO] [stderr]   Downloaded noodles-sam v0.84.0
[INFO] [stderr]   Downloaded lexical-write-float v1.0.6
[INFO] [stderr]   Downloaded criterion v0.8.2
[INFO] [stderr]   Downloaded lexical-util v1.0.7
[INFO] [stderr]   Downloaded lexical-parse-float v1.0.6
[INFO] [stderr]   Downloaded rmcp v1.5.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1
[INFO] running `Command { std: "docker" "start" "17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1" "/opt/rustwide/cargo-home/bin/cargo" "+c999cef531ea9059e189e82fe0e82c5daf249bc9" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1" "/opt/rustwide/cargo-home/bin/cargo" "+c999cef531ea9059e189e82fe0e82c5daf249bc9" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.184
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]     Checking tracing-core v0.1.36
[INFO] [stderr]     Checking futures-channel v0.3.32
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]     Checking hashbrown v0.17.0
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]     Checking zlib-rs v0.6.3
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]    Compiling futures-macro v0.3.32
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]     Checking litemap v0.8.2
[INFO] [stderr]     Checking writeable v0.6.3
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]    Compiling icu_properties_data v2.2.0
[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
[INFO] [stderr]    Compiling darling_core v0.23.0
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]     Checking bit-vec v0.9.1
[INFO] [stderr]    Compiling ref-cast v1.0.25
[INFO] [stderr]     Checking indexmap v2.14.0
[INFO] [stderr]    Compiling zerocopy v0.8.48
[INFO] [stderr]    Compiling zerocopy-derive v0.8.48
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling serde_derive_internals v0.29.1
[INFO] [stderr]     Checking noodles-core v0.19.0
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]    Compiling ref-cast-impl v1.0.25
[INFO] [stderr]    Compiling zmij v1.0.21
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling cc v1.2.60
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]    Compiling clap_derive v4.6.1
[INFO] [stderr]     Checking clap_builder v4.6.0
[INFO] [stderr]    Compiling rmcp v1.5.0
[INFO] [stderr]     Checking dyn-clone v1.0.20
[INFO] [stderr]     Checking zerofrom v0.1.7
[INFO] [stderr]     Checking axum-core v0.5.6
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking errno v0.3.14
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]     Checking yoke v0.8.2
[INFO] [stderr]     Checking signal-hook-registry v1.4.8
[INFO] [stderr]     Checking mio v1.2.0
[INFO] [stderr]     Checking socket2 v0.6.3
[INFO] [stderr]     Checking zerovec v0.11.6
[INFO] [stderr]     Checking noodles-bgzf v0.46.0
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]     Checking getrandom v0.4.2
[INFO] [stderr]    Compiling schemars_derive v1.2.1
[INFO] [stderr]     Checking rand v0.10.1
[INFO] [stderr]     Checking uuid v1.23.1
[INFO] [stderr]    Compiling alloca v0.4.0
[INFO] [stderr]     Checking noodles-csi v0.55.0
[INFO] [stderr]     Checking tokio v1.52.1
[INFO] [stderr]     Checking noodles-fasta v0.60.0
[INFO] [stderr]     Checking tracing-log v0.2.0
[INFO] [stderr]    Compiling pastey v0.2.1
[INFO] [stderr]     Checking noodles-sam v0.84.0
[INFO] [stderr]     Checking matchers v0.2.0
[INFO] [stderr]     Checking tracing-subscriber v0.3.23
[INFO] [stderr]     Checking iri-string v0.7.12
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking potential_utf v0.1.5
[INFO] [stderr]     Checking criterion-plot v0.8.2
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking regex v1.12.3
[INFO] [stderr] error: could not compile `darling_core` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/c999cef531ea9059e189e82fe0e82c5daf249bc9/bin/rustc --crate-name darling_core --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/darling_core-0.23.0/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat,unused-externs-silent --crate-type lib --emit=dep-info,metadata,link -Z embed-metadata=no -C embed-bitcode=no --cfg 'feature="strsim"' --cfg 'feature="suggestions"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("diagnostics", "serde", "strsim", "suggestions"))' -C metadata=fae43bc8e00affe0 -C extra-filename=-36bd0591bef97f53 --out-dir /opt/rustwide/target/debug/build/darling_core/36bd0591bef97f53/out -L dependency=/opt/rustwide/target/debug/build/proc-macro2/d4cb564e807a9cd7/out -L dependency=/opt/rustwide/target/debug/build/quote/aa2c5b8519914b46/out -L dependency=/opt/rustwide/target/debug/build/unicode-ident/8c98a1a0e58216a9/out --extern ident_case=/opt/rustwide/target/debug/build/ident_case/ecc112105bc5215b/out/libident_case-ecc112105bc5215b.rmeta --extern proc_macro2=/opt/rustwide/target/debug/build/proc-macro2/d4cb564e807a9cd7/out/libproc_macro2-d4cb564e807a9cd7.rmeta --extern quote=/opt/rustwide/target/debug/build/quote/aa2c5b8519914b46/out/libquote-aa2c5b8519914b46.rmeta --extern strsim=/opt/rustwide/target/debug/build/strsim/9754e702f19a9357/out/libstrsim-9754e702f19a9357.rmeta --extern syn=/opt/rustwide/target/debug/build/syn/ae6c806947fc9697/out/libsyn-ae6c806947fc9697.rmeta --cap-lints allow --cap-lints=forbid --force-warn=unused_crate_dependencies` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `serde_core` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/c999cef531ea9059e189e82fe0e82c5daf249bc9/bin/rustc --crate-name serde_core --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/serde_core-1.0.228/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat,unused-externs-silent --crate-type lib --emit=dep-info,metadata,link -Z embed-metadata=no -C embed-bitcode=no --cfg 'feature="std"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("alloc", "default", "rc", "result", "std", "unstable"))' -C metadata=a719fd375dae3512 -C extra-filename=-77ea432a7015f496 --out-dir /opt/rustwide/target/debug/build/serde_core/77ea432a7015f496/out --cap-lints allow --cap-lints=forbid --force-warn=unused_crate_dependencies --check-cfg 'cfg(if_docsrs_then_no_serde_core)' --check-cfg 'cfg(no_core_cstr)' --check-cfg 'cfg(no_core_error)' --check-cfg 'cfg(no_core_net)' --check-cfg 'cfg(no_core_num_saturating)' --check-cfg 'cfg(no_diagnostic_namespace)' --check-cfg 'cfg(no_serde_derive)' --check-cfg 'cfg(no_std_atomic)' --check-cfg 'cfg(no_std_atomic64)' --check-cfg 'cfg(no_target_has_atomic)'` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1", kill_on_drop: false }`
[INFO] [stdout] 17ce8d1d2788e3e0cfa8e7425653c3980b34be982f64521f170b7a4afb18bfa1
