[INFO] cloning repository https://github.com/databio/gtokenizers-bench
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/databio/gtokenizers-bench" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdatabio%2Fgtokenizers-bench", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdatabio%2Fgtokenizers-bench'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 54f7fb6296fde269e43a8ef663ee30ca3b55da85
[INFO] checking databio/gtokenizers-bench against f4dd856795debe636f2ba39a900f162f5abeb7e8 for pr-160904
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdatabio%2Fgtokenizers-bench" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/databio/gtokenizers-bench
[INFO] finished tweaking git repo https://github.com/databio/gtokenizers-bench
[INFO] tweaked toml for git repo https://github.com/databio/gtokenizers-bench written to /workspace/builds/worker-2-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/databio/gtokenizers-bench on toolchain f4dd856795debe636f2ba39a900f162f5abeb7e8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f4dd856795debe636f2ba39a900f162f5abeb7e8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/databio/gtokenizers-bench already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f4dd856795debe636f2ba39a900f162f5abeb7e8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] checking databio/gtokenizers-bench against f4dd856795debe636f2ba39a900f162f5abeb7e8 for pr-160904
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdatabio%2Fgtokenizers-bench" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/databio/gtokenizers-bench
[INFO] finished tweaking git repo https://github.com/databio/gtokenizers-bench
[INFO] tweaked toml for git repo https://github.com/databio/gtokenizers-bench written to /workspace/builds/worker-2-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/databio/gtokenizers-bench on toolchain f4dd856795debe636f2ba39a900f162f5abeb7e8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f4dd856795debe636f2ba39a900f162f5abeb7e8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/databio/gtokenizers-bench already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f4dd856795debe636f2ba39a900f162f5abeb7e8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rust-lapper v1.1.0
[INFO] [stderr]   Downloaded seq_io v0.3.3
[INFO] [stderr]   Downloaded noodles-bgzf v0.33.0
[INFO] [stderr]   Downloaded noodles v0.83.0
[INFO] [stderr]   Downloaded os_pipe v1.2.1
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded pest_meta v2.7.15
[INFO] [stderr]   Downloaded pest_generator v2.7.15
[INFO] [stderr]   Downloaded tempfile v3.16.0
[INFO] [stderr]   Downloaded ndarray-npy v0.8.1
[INFO] [stderr]   Downloaded noodles-csi v0.39.0
[INFO] [stderr]   Downloaded noodles-bam v0.68.0
[INFO] [stderr]   Downloaded console v0.15.10
[INFO] [stderr]   Downloaded miniz_oxide v0.8.4
[INFO] [stderr]   Downloaded pest_derive v2.7.15
[INFO] [stderr]   Downloaded ufmt-macros v0.3.0
[INFO] [stderr]   Downloaded noodles-sam v0.65.0
[INFO] [stderr]   Downloaded libdeflater v0.13.0
[INFO] [stderr]   Downloaded index_list v0.2.15
[INFO] [stderr]   Downloaded byteordered v0.6.0
[INFO] [stderr]   Downloaded winnow v0.7.2
[INFO] [stderr]   Downloaded pest v2.7.15
[INFO] [stderr]   Downloaded ufmt v0.2.0
[INFO] [stderr]   Downloaded libdeflate-sys v0.13.0
[INFO] [stderr]   Downloaded criterion-plot v0.4.5
[INFO] [stderr]   Downloaded anyhow v1.0.95
[INFO] [stderr]   Downloaded serde_cbor v0.11.2
[INFO] [stderr]   Downloaded attohttpc v0.25.0
[INFO] [stderr]   Downloaded base64-url v2.0.2
[INFO] [stderr]   Downloaded criterion v0.3.6
[INFO] [stderr]   Downloaded bigtools v0.5.5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd
[INFO] running `Command { std: "docker" "start" "39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd" "/opt/rustwide/cargo-home/bin/cargo" "+f4dd856795debe636f2ba39a900f162f5abeb7e8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd" "/opt/rustwide/cargo-home/bin/cargo" "+f4dd856795debe636f2ba39a900f162f5abeb7e8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling thiserror v2.0.11
[INFO] [stderr]    Compiling cc v1.2.13
[INFO] [stderr]     Checking lexical-util v1.0.6
[INFO] [stderr]     Checking regex-automata v0.4.9
[INFO] [stderr]     Checking miniz_oxide v0.8.4
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]     Checking crossbeam-channel v0.5.14
[INFO] [stderr]    Compiling ucd-trie v0.1.7
[INFO] [stderr]    Compiling thiserror-impl v2.0.11
[INFO] [stderr]     Checking smallvec v1.13.2
[INFO] [stderr]     Checking yoke v0.7.5
[INFO] [stderr]    Compiling once_cell v1.20.3
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]    Compiling futures-macro v0.3.31
[INFO] [stderr]    Compiling matrixmultiply v0.3.9
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking percent-encoding v2.3.1
[INFO] [stderr]    Compiling rustix v0.38.44
[INFO] [stderr]     Checking zerovec v0.10.4
[INFO] [stderr]    Compiling getrandom v0.3.1
[INFO] [stderr]    Compiling rustls v0.21.12
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking form_urlencoded v1.2.1
[INFO] [stderr]     Checking num_cpus v1.16.0
[INFO] [stderr]     Checking flate2 v1.0.35
[INFO] [stderr]    Compiling portable-atomic v1.10.0
[INFO] [stderr]    Compiling anyhow v1.0.95
[INFO] [stderr]     Checking rustls-native-certs v0.6.3
[INFO] [stderr]     Checking num-bigint v0.4.6
[INFO] [stderr]     Checking lexical-write-integer v1.0.5
[INFO] [stderr]     Checking lexical-parse-integer v1.0.5
[INFO] [stderr]     Checking lexical-parse-float v1.0.5
[INFO] [stderr]     Checking serde_spanned v0.6.8
[INFO] [stderr]     Checking toml_datetime v0.6.8
[INFO] [stderr]     Checking lexical-write-float v1.0.5
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[INFO] [stderr]     Checking ufmt-write v0.1.0
[INFO] [stderr]     Checking console v0.15.10
[INFO] [stderr]     Checking futures-util v0.3.31
[INFO] [stderr]     Checking noodles-bgzf v0.33.0
[INFO] [stderr]     Checking rayon v1.10.0
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[INFO] [stderr]     Checking tokio v1.43.0
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[INFO] [stderr]     Checking thiserror v1.0.69
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[INFO] [stderr]     Checking zip v0.5.13
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[INFO] [stderr]     Checking indicatif v0.17.11
[INFO] [stderr]     Checking tinystr v0.7.6
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[INFO] [stderr]     Checking sha2 v0.10.8
[INFO] [stderr]     Checking seq_io v0.3.3
[INFO] [stderr]    Compiling pest v2.7.15
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]     Checking md-5 v0.10.6
[INFO] [stderr]     Checking base64-url v2.0.2
[INFO] [stderr]     Checking rust-lapper v1.1.0
[INFO] [stderr]    Compiling ring v0.17.8
[INFO] [stderr]    Compiling libdeflate-sys v0.13.0
[INFO] [stderr]     Checking os_pipe v1.2.1
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]     Checking icu_provider v1.5.0
[INFO] [stderr]     Checking half v1.8.3
[INFO] [stderr]     Checking csv v1.3.1
[INFO] [stderr]     Checking bstr v1.11.3
[INFO] [stderr]     Checking serde_cbor v0.11.2
[INFO] [stderr]     Checking regex v1.11.1
[INFO] [stderr]     Checking criterion-plot v0.4.5
[INFO] [stderr]     Checking icu_locid_transform v1.5.0
[INFO] [stderr]     Checking tempfile v3.16.0
[INFO] [stderr]     Checking clap v2.34.0
[INFO] [stderr]     Checking plotters v0.3.7
[INFO] [stderr]     Checking tinytemplate v1.2.1
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking noodles-core v0.15.0
[INFO] [stderr]     Checking noodles-csi v0.39.0
[INFO] [stderr]     Checking icu_properties v1.5.1
[INFO] [stderr]    Compiling pest_meta v2.7.15
[INFO] [stderr]     Checking noodles-sam v0.65.0
[INFO] [stderr]     Checking toml_edit v0.22.24
[INFO] [stderr]    Compiling pest_generator v2.7.15
[INFO] [stderr]    Compiling ufmt-macros v0.3.0
[INFO] [stderr]     Checking criterion v0.3.6
[INFO] [stderr]     Checking noodles-bam v0.68.0
[INFO] [stderr]    Compiling pest_derive v2.7.15
[INFO] [stderr]     Checking icu_normalizer v1.5.0
[INFO] [stderr]     Checking libdeflater v0.13.0
[INFO] [stderr]     Checking py_literal v0.4.0
[INFO] [stderr]     Checking ufmt v0.2.0
[INFO] [stderr]     Checking idna_adapter v1.2.0
[INFO] [stderr]     Checking idna v1.0.3
[INFO] [stderr]     Checking url v2.5.4
[INFO] [stderr]     Checking futures-executor v0.3.31
[INFO] [stderr]     Checking noodles v0.83.0
[INFO] [stderr]     Checking futures v0.3.31
[INFO] [stderr]     Checking ndarray-npy v0.8.1
[INFO] [stderr]     Checking toml v0.8.20
[INFO] [stderr]     Checking rustls-webpki v0.101.7
[INFO] [stderr]     Checking sct v0.7.1
[INFO] [stderr]     Checking webpki v0.22.4
[INFO] [stderr]     Checking attohttpc v0.25.0
[INFO] [stderr]     Checking bigtools v0.5.5
[INFO] [stderr]     Checking gtars v0.2.0 (https://github.com/databio/gtars.git?branch=dev_ailist#985e1eaf)
[INFO] [stderr]     Checking gtokenizer-bench v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 39.78s
[INFO] running `Command { std: "docker" "inspect" "39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd", kill_on_drop: false }`
[INFO] [stdout] 39bdd721622c1a5463921fd3f06274e9d3ebcc0c7e53c46580bc73808f77d8dd
