[INFO] cloning repository https://github.com/WJackKing/prokaryote
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/WJackKing/prokaryote" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FWJackKing%2Fprokaryote", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FWJackKing%2Fprokaryote'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 297e5092194ceabc552456006ed28ad52cb0cd69
[INFO] checking WJackKing/prokaryote/297e5092194ceabc552456006ed28ad52cb0cd69 against 1ed2df61a19042f231709eb05d032ae9e2cb2084 for pr-160235
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FWJackKing%2Fprokaryote" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/WJackKing/prokaryote
[INFO] finished tweaking git repo https://github.com/WJackKing/prokaryote
[INFO] tweaked toml for git repo https://github.com/WJackKing/prokaryote written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/WJackKing/prokaryote on toolchain 1ed2df61a19042f231709eb05d032ae9e2cb2084
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1ed2df61a19042f231709eb05d032ae9e2cb2084" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/WJackKing/prokaryote already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1ed2df61a19042f231709eb05d032ae9e2cb2084" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: Cargo.toml: `package.edition` is unspecified, defaulting to `2015` while the latest is `2024`
[INFO] [stderr] warning: `prokaryote` (manifest) generated 1 warning
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bitflags v1.0.1
[INFO] [stderr]   Downloaded rand v0.4.2
[INFO] [stderr]   Downloaded libc v0.2.40
[INFO] [stderr]   Downloaded winapi v0.3.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:00c5645b54fe3ce5dae1417175e3c7fb6a6646c021d554ecd63a097b8b9f3602" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236
[INFO] running `Command { std: "docker" "start" "72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236" "/opt/rustwide/cargo-home/bin/cargo" "+1ed2df61a19042f231709eb05d032ae9e2cb2084" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236" "/opt/rustwide/cargo-home/bin/cargo" "+1ed2df61a19042f231709eb05d032ae9e2cb2084" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: Cargo.toml: `package.edition` is unspecified, defaulting to `2015` while the latest is `2024`
[INFO] [stderr] warning: `prokaryote` (manifest) generated 1 warning
[INFO] [stderr]     Checking libc v0.2.40
[INFO] [stderr]     Checking rand v0.4.2
[INFO] [stderr]     Checking prokaryote v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/dna/base.rs:27:14
[INFO] [stdout]    |
[INFO] [stdout] 27 |             0...4 => Ok(Base { base }),
[INFO] [stdout]    |              ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout]    = note: `#[warn(ellipsis_inclusive_range_patterns)]` (part of `#[warn(rust_2021_compatibility)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/dna/mod.rs:40:18
[INFO] [stdout]    |
[INFO] [stdout] 40 |                 0...4 => dna.push_num(base).unwrap(),
[INFO] [stdout]    |                  ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/protein/aa.rs:22:14
[INFO] [stdout]    |
[INFO] [stdout] 22 |             0...21 => Ok(Aa { aa }),
[INFO] [stdout]    |              ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/protein/mod.rs:33:18
[INFO] [stdout]    |
[INFO] [stdout] 33 |                 0...21 => p.push_num(a).unwrap(),
[INFO] [stdout]    |                  ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/dna/base.rs:27:14
[INFO] [stdout]    |
[INFO] [stdout] 27 |             0...4 => Ok(Base { base }),
[INFO] [stdout]    |              ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout]    = note: `#[warn(ellipsis_inclusive_range_patterns)]` (part of `#[warn(rust_2021_compatibility)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/dna/mod.rs:40:18
[INFO] [stdout]    |
[INFO] [stdout] 40 |                 0...4 => dna.push_num(base).unwrap(),
[INFO] [stdout]    |                  ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/protein/aa.rs:22:14
[INFO] [stdout]    |
[INFO] [stdout] 22 |             0...21 => Ok(Aa { aa }),
[INFO] [stdout]    |              ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: `...` range patterns are deprecated
[INFO] [stdout]   --> src/protein/mod.rs:33:18
[INFO] [stdout]    |
[INFO] [stdout] 33 |                 0...21 => p.push_num(a).unwrap(),
[INFO] [stdout]    |                  ^^^ help: use `..=` for an inclusive range
[INFO] [stdout]    |
[INFO] [stdout]    = warning: this is accepted in the current edition (Rust 2015) but is a hard error in Rust 2021!
[INFO] [stdout]    = note: for more information, see <https://doc.rust-lang.org/edition-guide/rust-2021/warnings-promoted-to-error.html>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `dna_io` is never read
[INFO] [stdout]  --> src/orf/mod.rs:4:5
[INFO] [stdout]   |
[INFO] [stdout] 3 | pub struct Orf<'a> {
[INFO] [stdout]   |            --- field in this struct
[INFO] [stdout] 4 |     dna_io: &'a mut Dnaio,
[INFO] [stdout]   |     ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/dna/mod.rs:48:18
[INFO] [stdout]    |
[INFO] [stdout] 48 |     pub fn codon(&self, offset: usize) -> Option<GetCodon> {
[INFO] [stdout]    |                  ^^^^^                           ^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                  |
[INFO] [stdout]    |                  the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 48 |     pub fn codon(&self, offset: usize) -> Option<GetCodon<'_>> {
[INFO] [stdout]    |                                                          ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/dna/codon.rs:90:26
[INFO] [stdout]    |
[INFO] [stdout] 90 |     pub fn from_dna(dna: &Dna, offset: usize) -> GetCodon {
[INFO] [stdout]    |                          ^^^^                    ^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                          |
[INFO] [stdout]    |                          the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 90 |     pub fn from_dna(dna: &Dna, offset: usize) -> GetCodon<'_> {
[INFO] [stdout]    |                                                          ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/orf/mod.rs:12:24
[INFO] [stdout]    |
[INFO] [stdout] 12 |     pub fn new(dna_io: &mut Dnaio, record_index: usize) -> Result<Orf, &'static str> {
[INFO] [stdout]    |                        ^^^^^^^^^^ the lifetime is elided here     ^^^ the same lifetime is hidden here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 12 |     pub fn new(dna_io: &mut Dnaio, record_index: usize) -> Result<Orf<'_>, &'static str> {
[INFO] [stdout]    |                                                                      ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `dna_io` is never read
[INFO] [stdout]  --> src/orf/mod.rs:4:5
[INFO] [stdout]   |
[INFO] [stdout] 3 | pub struct Orf<'a> {
[INFO] [stdout]   |            --- field in this struct
[INFO] [stdout] 4 |     dna_io: &'a mut Dnaio,
[INFO] [stdout]   |     ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/dna/mod.rs:48:18
[INFO] [stdout]    |
[INFO] [stdout] 48 |     pub fn codon(&self, offset: usize) -> Option<GetCodon> {
[INFO] [stdout]    |                  ^^^^^                           ^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                  |
[INFO] [stdout]    |                  the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 48 |     pub fn codon(&self, offset: usize) -> Option<GetCodon<'_>> {
[INFO] [stdout]    |                                                          ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/dna/codon.rs:90:26
[INFO] [stdout]    |
[INFO] [stdout] 90 |     pub fn from_dna(dna: &Dna, offset: usize) -> GetCodon {
[INFO] [stdout]    |                          ^^^^                    ^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                          |
[INFO] [stdout]    |                          the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 90 |     pub fn from_dna(dna: &Dna, offset: usize) -> GetCodon<'_> {
[INFO] [stdout]    |                                                          ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/orf/mod.rs:12:24
[INFO] [stdout]    |
[INFO] [stdout] 12 |     pub fn new(dna_io: &mut Dnaio, record_index: usize) -> Result<Orf, &'static str> {
[INFO] [stdout]    |                        ^^^^^^^^^^ the lifetime is elided here     ^^^ the same lifetime is hidden here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 12 |     pub fn new(dna_io: &mut Dnaio, record_index: usize) -> Result<Orf<'_>, &'static str> {
[INFO] [stdout]    |                                                                      ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1.15s
[INFO] running `Command { std: "docker" "inspect" "72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236", kill_on_drop: false }`
[INFO] [stdout] 72eaaecd4f1c2b9eb2de71c3f04ed53f8444474875f585bb0f51d24d2d8b8236
