[INFO] cloning repository https://github.com/30be/scaffolding-lna-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/30be/scaffolding-lna-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F30be%2Fscaffolding-lna-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F30be%2Fscaffolding-lna-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 22427a9f064f9c60fd6090ca46bef07c17000c53
[INFO] checking 30be/scaffolding-lna-rs against 011c518242557d21690f7936b5812318dc2fec47 for pr-159877
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F30be%2Fscaffolding-lna-rs" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/30be/scaffolding-lna-rs
[INFO] finished tweaking git repo https://github.com/30be/scaffolding-lna-rs
[INFO] tweaked toml for git repo https://github.com/30be/scaffolding-lna-rs written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/30be/scaffolding-lna-rs on toolchain 011c518242557d21690f7936b5812318dc2fec47
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+011c518242557d21690f7936b5812318dc2fec47" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/30be/scaffolding-lna-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+011c518242557d21690f7936b5812318dc2fec47" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "start" "5b4e0b20289525408b84d79b65194b09c33d45c8427ee3232f16db4a98d14151", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "5b4e0b20289525408b84d79b65194b09c33d45c8427ee3232f16db4a98d14151" "/opt/rustwide/cargo-home/bin/cargo" "+011c518242557d21690f7936b5812318dc2fec47" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5b4e0b20289525408b84d79b65194b09c33d45c8427ee3232f16db4a98d14151", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "5b4e0b20289525408b84d79b65194b09c33d45c8427ee3232f16db4a98d14151" "/opt/rustwide/cargo-home/bin/cargo" "+011c518242557d21690f7936b5812318dc2fec47" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
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[INFO] [stdout] warning: unused import: `std::str::FromStr`
[INFO] [stdout]  --> src/pdb.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use std::str::FromStr;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::fmt`
[INFO] [stdout]  --> src/pdb.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use std::fmt;
[INFO] [stdout]   |     ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::fmt`
[INFO] [stdout]  --> src/pdb.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use std::fmt;
[INFO] [stdout]   |     ^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::str::FromStr`
[INFO] [stdout]  --> src/pdb.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use std::str::FromStr;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/pdb.rs:127:13
[INFO] [stdout]     |
[INFO] [stdout] 127 |         let mut chain_atoms: Vec<&Atom> = self.atoms.iter()
[INFO] [stdout]     |             ----^^^^^^^^^^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/db.rs:99:13
[INFO] [stdout]    |
[INFO] [stdout] 99 |         let mut db = Db::open_in_memory().unwrap();
[INFO] [stdout]    |             ----^^
[INFO] [stdout]    |             |
[INFO] [stdout]    |             help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `chain_id`
[INFO] [stdout]    --> src/pdb.rs:156:14
[INFO] [stdout]     |
[INFO] [stdout] 156 |         for (chain_id, atoms) in chains {
[INFO] [stdout]     |              ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_chain_id`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/pdb.rs:127:13
[INFO] [stdout]     |
[INFO] [stdout] 127 |         let mut chain_atoms: Vec<&Atom> = self.atoms.iter()
[INFO] [stdout]     |             ----^^^^^^^^^^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `chain_id`
[INFO] [stdout]    --> src/pdb.rs:156:14
[INFO] [stdout]     |
[INFO] [stdout] 156 |         for (chain_id, atoms) in chains {
[INFO] [stdout]     |              ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_chain_id`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `draw_resolution_vs_score` is never used
[INFO] [stdout]    --> src/bin/make_plots.rs:246:4
[INFO] [stdout]     |
[INFO] [stdout] 246 | fn draw_resolution_vs_score(out_path: &str) -> Result<(), Box<dyn std::error::Error>> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `draw_species_bar_chart` is never used
[INFO] [stdout]    --> src/bin/make_plots.rs:275:4
[INFO] [stdout]     |
[INFO] [stdout] 275 | fn draw_species_bar_chart(out_path: &str) -> Result<(), Box<dyn std::error::Error>> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `draw_ramachandran_heatmap` is never used
[INFO] [stdout]    --> src/bin/make_plots.rs:314:4
[INFO] [stdout]     |
[INFO] [stdout] 314 | fn draw_ramachandran_heatmap(out_path: &str) -> Result<(), Box<dyn std::error::Error>> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `draw_resolution_vs_score` is never used
[INFO] [stdout]    --> src/bin/make_plots.rs:246:4
[INFO] [stdout]     |
[INFO] [stdout] 246 | fn draw_resolution_vs_score(out_path: &str) -> Result<(), Box<dyn std::error::Error>> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `draw_species_bar_chart` is never used
[INFO] [stdout]    --> src/bin/make_plots.rs:275:4
[INFO] [stdout]     |
[INFO] [stdout] 275 | fn draw_species_bar_chart(out_path: &str) -> Result<(), Box<dyn std::error::Error>> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `draw_ramachandran_heatmap` is never used
[INFO] [stdout]    --> src/bin/make_plots.rs:314:4
[INFO] [stdout]     |
[INFO] [stdout] 314 | fn draw_ramachandran_heatmap(out_path: &str) -> Result<(), Box<dyn std::error::Error>> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.90s
[INFO] running `Command { std: "docker" "inspect" "5b4e0b20289525408b84d79b65194b09c33d45c8427ee3232f16db4a98d14151", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5b4e0b20289525408b84d79b65194b09c33d45c8427ee3232f16db4a98d14151", kill_on_drop: false }`
[INFO] [stdout] 5b4e0b20289525408b84d79b65194b09c33d45c8427ee3232f16db4a98d14151
