[INFO] cloning repository https://github.com/EnzymeML/enzymeml-mcp
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/EnzymeML/enzymeml-mcp" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FEnzymeML%2Fenzymeml-mcp", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FEnzymeML%2Fenzymeml-mcp'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 5938b4265ea2194da82fe468994f80928cc7fe77
[INFO] checking EnzymeML/enzymeml-mcp against e3d12f3322cb00126b2208c6b9df3ac4467951f5 for pr-159706
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FEnzymeML%2Fenzymeml-mcp" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/EnzymeML/enzymeml-mcp
[INFO] finished tweaking git repo https://github.com/EnzymeML/enzymeml-mcp
[INFO] tweaked toml for git repo https://github.com/EnzymeML/enzymeml-mcp written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/EnzymeML/enzymeml-mcp on toolchain e3d12f3322cb00126b2208c6b9df3ac4467951f5
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e3d12f3322cb00126b2208c6b9df3ac4467951f5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/EnzymeML/enzymeml-mcp already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e3d12f3322cb00126b2208c6b9df3ac4467951f5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:00c5645b54fe3ce5dae1417175e3c7fb6a6646c021d554ecd63a097b8b9f3602" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6
[INFO] running `Command { std: "docker" "start" "ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6" "/opt/rustwide/cargo-home/bin/cargo" "+e3d12f3322cb00126b2208c6b9df3ac4467951f5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6" "/opt/rustwide/cargo-home/bin/cargo" "+e3d12f3322cb00126b2208c6b9df3ac4467951f5" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.105
[INFO] [stderr]    Compiling quote v1.0.43
[INFO] [stderr]    Compiling find-msvc-tools v0.1.7
[INFO] [stderr]    Compiling libc v0.2.180
[INFO] [stderr]     Checking num-traits v0.2.19
[INFO] [stderr]     Checking bytemuck v1.24.0
[INFO] [stderr]    Compiling zerocopy v0.8.33
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]    Compiling zmij v1.0.14
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]     Checking mio v1.1.1
[INFO] [stderr]    Compiling smallvec v1.15.1
[INFO] [stderr]    Compiling indexmap v2.13.0
[INFO] [stderr]     Checking socket2 v0.6.1
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling bytes v1.11.0
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]    Compiling futures-sink v0.3.31
[INFO] [stderr]     Checking regex-syntax v0.8.8
[INFO] [stderr]    Compiling nano-gemm-codegen v0.1.0
[INFO] [stderr]    Compiling ref-cast v1.0.25
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]    Compiling syn v2.0.114
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling errno v0.3.14
[INFO] [stderr]     Checking num-bigint v0.4.6
[INFO] [stderr]    Compiling signal-hook-registry v1.4.8
[INFO] [stderr]    Compiling cc v1.2.52
[INFO] [stderr]     Checking num-iter v0.1.45
[INFO] [stderr]    Compiling http v1.4.0
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling thiserror v2.0.17
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]    Compiling slab v0.4.11
[INFO] [stderr]    Compiling openssl-src v300.5.4+3.5.4
[INFO] [stderr]    Compiling bitflags v2.10.0
[INFO] [stderr]     Checking num v0.4.3
[INFO] [stderr]     Checking regex-automata v0.4.13
[INFO] [stderr]    Compiling pulp v0.21.5
[INFO] [stderr]     Checking ryu v1.0.22
[INFO] [stderr]    Compiling openssl v0.10.75
[INFO] [stderr]    Compiling log v0.4.29
[INFO] [stderr]    Compiling cmake v0.1.57
[INFO] [stderr]    Compiling openssl-sys v0.9.111
[INFO] [stderr]     Checking reborrow v0.5.5
[INFO] [stderr]    Compiling futures-io v0.3.31
[INFO] [stderr]    Compiling native-tls v0.2.14
[INFO] [stderr]    Compiling aws-lc-sys v0.35.0
[INFO] [stderr]    Compiling http-body v1.0.1
[INFO] [stderr]    Compiling tracing-core v0.1.36
[INFO] [stderr]    Compiling httparse v1.10.1
[INFO] [stderr]     Checking arrow-schema v55.2.0
[INFO] [stderr]    Compiling dyn-stack-macros v0.1.3
[INFO] [stderr]     Checking dyn-stack v0.13.2
[INFO] [stderr]     Checking regex v1.12.2
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling darling_core v0.23.0
[INFO] [stderr]    Compiling darling_core v0.21.3
[INFO] [stderr]    Compiling tracing v0.1.44
[INFO] [stderr]    Compiling tower-service v0.3.3
[INFO] [stderr]    Compiling atomic-waker v1.1.2
[INFO] [stderr]    Compiling unicase v2.9.0
[INFO] [stderr]     Checking rustls-pki-types v1.13.2
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling rand_core v0.9.5
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.1
[INFO] [stderr]    Compiling tokio-macros v2.6.0
[INFO] [stderr]    Compiling zerovec-derive v0.11.2
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling zerocopy-derive v0.8.33
[INFO] [stderr]    Compiling futures-macro v0.3.31
[INFO] [stderr]    Compiling zerofrom v0.1.6
[INFO] [stderr]    Compiling yoke v0.8.1
[INFO] [stderr]     Checking tokio v1.49.0
[INFO] [stderr]    Compiling zerovec v0.11.5
[INFO] [stderr]    Compiling openssl-macros v0.1.1
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]    Compiling ref-cast-impl v1.0.25
[INFO] [stderr]    Compiling tinystr v0.8.2
[INFO] [stderr]     Checking futures-util v0.3.31
[INFO] [stderr]    Compiling thiserror-impl v2.0.17
[INFO] [stderr]    Compiling icu_locale_core v2.1.1
[INFO] [stderr]     Checking chrono v0.4.42
[INFO] [stderr]    Compiling potential_utf v0.1.4
[INFO] [stderr]    Compiling zerotrie v0.2.3
[INFO] [stderr]    Compiling tracing-attributes v0.1.31
[INFO] [stderr]    Compiling icu_provider v2.1.1
[INFO] [stderr]    Compiling icu_collections v2.1.1
[INFO] [stderr]     Checking half v2.7.1
[INFO] [stderr]     Checking tokio-util v0.7.18
[INFO] [stderr]     Checking arrow-buffer v55.2.0
[INFO] [stderr]    Compiling darling_macro v0.23.0
[INFO] [stderr]    Compiling icu_normalizer v2.1.1
[INFO] [stderr]    Compiling icu_properties v2.1.2
[INFO] [stderr]    Compiling darling v0.23.0
[INFO] [stderr]    Compiling darling_macro v0.21.3
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking arrow-data v55.2.0
[INFO] [stderr]    Compiling darling v0.21.3
[INFO] [stderr]     Checking arrow-array v55.2.0
[INFO] [stderr]    Compiling idna_adapter v1.2.1
[INFO] [stderr]    Compiling futures-channel v0.3.31
[INFO] [stderr]     Checking raw-cpuid v11.6.0
[INFO] [stderr]    Compiling h2 v0.4.13
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]    Compiling aws-lc-rs v1.15.2
[INFO] [stderr]    Compiling seq-macro v0.3.6
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]    Compiling rand_chacha v0.9.0
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling mime_guess v2.0.5
[INFO] [stderr]     Checking gemm-common v0.18.2
[INFO] [stderr]    Compiling serde_derive_internals v0.29.1
[INFO] [stderr]    Compiling form_urlencoded v1.2.2
[INFO] [stderr]    Compiling sync_wrapper v1.0.2
[INFO] [stderr]    Compiling utf8parse v0.2.2
[INFO] [stderr]     Checking nano-gemm-core v0.1.0
[INFO] [stderr]    Compiling tower-layer v0.3.3
[INFO] [stderr]    Compiling ipnet v2.11.0
[INFO] [stderr]    Compiling rustix v1.1.3
[INFO] [stderr]    Compiling tower v0.5.3
[INFO] [stderr]    Compiling schemars_derive v1.2.0
[INFO] [stderr]    Compiling sha1 v0.10.6
[INFO] [stderr]    Compiling hyper v1.8.1
[INFO] [stderr]    Compiling anstyle-parse v0.2.7
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]    Compiling rand v0.9.2
[INFO] [stderr]    Compiling serde_with_macros v3.16.1
[INFO] [stderr]    Compiling clap_derive v4.5.49
[INFO] [stderr]    Compiling hyper-util v0.1.19
[INFO] [stderr]    Compiling darling_core v0.11.0
[INFO] [stderr]    Compiling http-body-util v0.1.3
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]    Compiling data-encoding v2.10.0
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.2
[INFO] [stderr]    Compiling mime v0.3.17
[INFO] [stderr]    Compiling unicode-width v0.2.0
[INFO] [stderr]    Compiling colorchoice v1.0.4
[INFO] [stderr]    Compiling anstyle v1.0.13
[INFO] [stderr]    Compiling iri-string v0.7.10
[INFO] [stderr]    Compiling borrow-or-share v0.2.4
[INFO] [stderr]    Compiling anstyle-query v1.1.5
[INFO] [stderr]     Checking linux-raw-sys v0.11.0
[INFO] [stderr]    Compiling anstream v0.6.21
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling fluent-uri v0.3.2
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling darling_macro v0.11.0
[INFO] [stderr]     Checking brotli v8.0.2
[INFO] [stderr]    Compiling prettyplease v0.2.37
[INFO] [stderr]    Compiling serde_urlencoded v0.7.1
[INFO] [stderr]    Compiling url v2.5.8
[INFO] [stderr]    Compiling tower-http v0.6.8
[INFO] [stderr]     Checking arrow-select v55.2.0
[INFO] [stderr]    Compiling hashlink v0.10.0
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling darling_core v0.20.11
[INFO] [stderr]    Compiling nano-gemm-c32 v0.1.0
[INFO] [stderr]    Compiling nano-gemm-f64 v0.1.0
[INFO] [stderr]    Compiling nano-gemm-c64 v0.1.0
[INFO] [stderr]    Compiling nano-gemm-f32 v0.1.0
[INFO] [stderr]    Compiling is-terminal v0.4.17
[INFO] [stderr]     Checking core_maths v0.1.1
[INFO] [stderr]    Compiling slotmap v1.0.7
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling outref v0.5.2
[INFO] [stderr]    Compiling humantime v2.3.0
[INFO] [stderr]     Checking compression-core v0.4.31
[INFO] [stderr]    Compiling uuid v1.19.0
[INFO] [stderr]    Compiling pulldown-cmark v0.13.0
[INFO] [stderr]    Compiling rustls v0.23.36
[INFO] [stderr]    Compiling rustix v0.38.44
[INFO] [stderr]    Compiling minijinja-embed v2.14.0
[INFO] [stderr]    Compiling arraydeque v0.5.1
[INFO] [stderr]    Compiling clap_lex v0.7.7
[INFO] [stderr]    Compiling vsimd v0.8.0
[INFO] [stderr]    Compiling env_logger v0.10.2
[INFO] [stderr]    Compiling yaml-rust2 v0.10.4
[INFO] [stderr]     Checking compression-codecs v0.4.36
[INFO] [stderr]     Checking strict-num v0.1.1
[INFO] [stderr]    Compiling uuid-simd v0.8.0
[INFO] [stderr]    Compiling clap_builder v4.5.54
[INFO] [stderr]    Compiling mdmodels v0.2.7
[INFO] [stderr]     Checking ttf-parser v0.25.1
[INFO] [stderr]    Compiling uuid v0.8.2
[INFO] [stderr]    Compiling darling_macro v0.20.11
[INFO] [stderr]    Compiling referencing v0.33.0
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling darling v0.11.0
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]    Compiling fraction v0.15.3
[INFO] [stderr]    Compiling fancy-regex v0.16.2
[INFO] [stderr]     Checking signal-hook v0.3.18
[INFO] [stderr]    Compiling getopts v0.2.24
[INFO] [stderr]    Compiling Inflector v0.11.4
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling jsonptr v0.7.1
[INFO] [stderr]    Compiling email_address v0.2.9
[INFO] [stderr]    Compiling equator-macro v0.2.1
[INFO] [stderr]    Compiling toml_parser v1.0.6+spec-1.1.0
[INFO] [stderr]    Compiling onig_sys v69.9.1
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]    Compiling serde_spanned v1.0.4
[INFO] [stderr]    Compiling toml_datetime v0.7.5+spec-1.1.0
[INFO] [stderr]    Compiling unicode-linebreak v0.1.5
[INFO] [stderr]     Checking roxmltree v0.20.0
[INFO] [stderr]    Compiling toml_writer v1.0.6+spec-1.1.0
[INFO] [stderr]    Compiling instability v0.3.11
[INFO] [stderr]    Compiling fixedbitset v0.5.7
[INFO] [stderr]    Compiling pulldown-cmark-escape v0.11.0
[INFO] [stderr]    Compiling unsafe-libyaml v0.2.11
[INFO] [stderr]    Compiling bytecount v0.6.9
[INFO] [stderr]    Compiling num-cmp v0.1.0
[INFO] [stderr]    Compiling smawk v0.3.2
[INFO] [stderr]     Checking tiny-skia-path v0.11.4
[INFO] [stderr]     Checking fontconfig-parser v0.5.8
[INFO] [stderr]    Compiling textwrap v0.16.2
[INFO] [stderr]    Compiling jsonschema v0.33.0
[INFO] [stderr]    Compiling petgraph v0.8.3
[INFO] [stderr]    Compiling toml v0.9.11+spec-1.1.0
[INFO] [stderr]    Compiling serde_yaml v0.9.34+deprecated
[INFO] [stderr]     Checking deranged v0.5.5
[INFO] [stderr]    Compiling schemars v1.2.0
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]    Compiling convert_case v0.8.0
[INFO] [stderr]     Checking equator v0.2.2
[INFO] [stderr]    Compiling json-patch v4.1.0
[INFO] [stderr]    Compiling variantly v0.4.0
[INFO] [stderr]    Compiling clap v4.5.54
[INFO] [stderr]     Checking signal-hook-mio v0.2.5
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]    Compiling darling v0.20.11
[INFO] [stderr] error: could not compile `nano-gemm-f64` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/e3d12f3322cb00126b2208c6b9df3ac4467951f5/bin/rustc --crate-name nano_gemm_f64 --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/nano-gemm-f64-0.1.0/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("default", "nightly"))' -C metadata=ef60bc34b50ce06b -C extra-filename=-ebc64a77d426b2d4 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern nano_gemm_core=/opt/rustwide/target/debug/deps/libnano_gemm_core-934915014a118128.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6", kill_on_drop: false }`
[INFO] [stdout] ef0d553d1f88eab768cdf976ae138e4af92593145c139cc5e33a580cf6c4aba6
