[INFO] cloning repository https://github.com/earth-metabolome-initiative/npc-smarts
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/earth-metabolome-initiative/npc-smarts" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fearth-metabolome-initiative%2Fnpc-smarts", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fearth-metabolome-initiative%2Fnpc-smarts'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3d43ab2a098745b938b89f3f4b148de9e000d11f
[INFO] checking earth-metabolome-initiative/npc-smarts against 3d50c25bc66853bf0ad205529d0f305a1d841b5e for pr-159598
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fearth-metabolome-initiative%2Fnpc-smarts" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/earth-metabolome-initiative/npc-smarts
[INFO] finished tweaking git repo https://github.com/earth-metabolome-initiative/npc-smarts
[INFO] tweaked toml for git repo https://github.com/earth-metabolome-initiative/npc-smarts written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/earth-metabolome-initiative/npc-smarts on toolchain 3d50c25bc66853bf0ad205529d0f305a1d841b5e
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3d50c25bc66853bf0ad205529d0f305a1d841b5e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/earth-metabolome-initiative/npc-smarts already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3d50c25bc66853bf0ad205529d0f305a1d841b5e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/earth-metabolome-initiative/smarts-evolution`
[INFO] [stderr]     Updating git repository `https://github.com/earth-metabolome-initiative/smarts-rs`
[INFO] [stderr]     Updating git repository `https://github.com/earth-metabolome-initiative/smiles-parser`
[INFO] [stderr]     Updating git repository `https://github.com/earth-metabolome-initiative/geometric-traits`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded rustc-std-workspace-alloc v1.0.1
[INFO] [stderr]   Downloaded zenodo-rs v0.1.7
[INFO] [stderr]   Downloaded client-uploader-traits v0.1.0
[INFO] [stderr]   Downloaded molecular-formulas v0.1.10
[INFO] [stderr]   Downloaded elements_rs v0.2.7
[INFO] [stderr]   Downloaded lender v0.6.2
[INFO] [stderr]   Downloaded stable_try_trait_v2 v1.75.1
[INFO] [stderr]   Downloaded maybe-dangling v0.1.2
[INFO] [stderr]   Downloaded multi_ranged v0.1.2
[INFO] [stderr]   Downloaded uuid v1.23.2
[INFO] [stderr]   Downloaded serde_nanos v0.1.4
[INFO] [stderr]   Downloaded tryhard v0.5.2
[INFO] [stderr]   Downloaded tokio-websockets v0.10.1
[INFO] [stderr]   Downloaded async-nats v0.49.0
[INFO] [stderr]   Downloaded nuid v0.5.0
[INFO] [stderr]   Downloaded nkeys v0.4.5
[INFO] [stderr]   Downloaded signatory v0.27.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:00c5645b54fe3ce5dae1417175e3c7fb6a6646c021d554ecd63a097b8b9f3602" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89
[INFO] running `Command { std: "docker" "start" "569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89" "/opt/rustwide/cargo-home/bin/cargo" "+3d50c25bc66853bf0ad205529d0f305a1d841b5e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89" "/opt/rustwide/cargo-home/bin/cargo" "+3d50c25bc66853bf0ad205529d0f305a1d841b5e" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]     Checking smallvec v1.15.1
[INFO] [stderr]     Checking log v0.4.30
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling zerocopy v0.8.50
[INFO] [stderr]     Checking linux-raw-sys v0.12.1
[INFO] [stderr]    Compiling cc v1.2.63
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling displaydoc v0.2.6
[INFO] [stderr]    Compiling zerocopy-derive v0.8.50
[INFO] [stderr]     Checking rustc-std-workspace-alloc v1.0.1
[INFO] [stderr]    Compiling darling_core v0.23.0
[INFO] [stderr]     Checking rustls-pki-types v1.14.1
[INFO] [stderr]     Checking http v1.4.1
[INFO] [stderr]     Checking castaway v0.2.4
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]    Compiling strum_macros v0.27.2
[INFO] [stderr]     Checking hashbrown v0.17.1
[INFO] [stderr]    Compiling futures-macro v0.3.32
[INFO] [stderr]     Checking mio v1.2.1
[INFO] [stderr]    Compiling unicode-segmentation v1.13.3
[INFO] [stderr]    Compiling rustls v0.23.40
[INFO] [stderr]    Compiling indoc v2.0.7
[INFO] [stderr]    Compiling instability v0.3.12
[INFO] [stderr]     Checking compact_str v0.9.1
[INFO] [stderr]     Checking tokio v1.52.3
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]    Compiling convert_case v0.10.0
[INFO] [stderr]     Checking lru v0.16.4
[INFO] [stderr]    Compiling strum_macros v0.28.0
[INFO] [stderr]     Checking tinystr v0.8.3
[INFO] [stderr]     Checking zerotrie v0.2.4
[INFO] [stderr]     Checking icu_collections v2.2.0
[INFO] [stderr]     Checking futures-util v0.3.32
[INFO] [stderr]     Checking chacha20 v0.10.0
[INFO] [stderr]     Checking icu_locale_core v2.2.0
[INFO] [stderr]     Checking hybrid-array v0.4.12
[INFO] [stderr]     Checking http-body v1.0.1
[INFO] [stderr]     Checking deranged v0.5.8
[INFO] [stderr]     Checking chrono v0.4.44
[INFO] [stderr]    Compiling derive_more-impl v2.1.1
[INFO] [stderr]     Checking thiserror v2.0.18
[INFO] [stderr]     Checking kasuari v0.4.12
[INFO] [stderr]     Checking parking_lot v0.12.5
[INFO] [stderr]     Checking signal-hook v0.3.18
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]     Checking aliasable v0.1.3
[INFO] [stderr]     Checking arrow-schema v58.3.0
[INFO] [stderr]     Checking stable_try_trait_v2 v1.75.1
[INFO] [stderr]     Checking maybe-dangling v0.1.2
[INFO] [stderr]    Compiling litrs v1.0.0
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]     Checking unicode-truncate v2.0.1
[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]     Checking time v0.3.47
[INFO] [stderr]     Checking lender v0.6.2
[INFO] [stderr]     Checking derive_more v2.1.1
[INFO] [stderr]     Checking bitvec v1.0.1
[INFO] [stderr]     Checking signal-hook-mio v0.2.5
[INFO] [stderr]     Checking multi_ranged v0.1.2
[INFO] [stderr]     Checking icu_properties v2.2.0
[INFO] [stderr]     Checking icu_normalizer v2.2.0
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]     Checking strum v0.27.2
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]     Checking ratatui-core v0.1.0
[INFO] [stderr]     Checking rand v0.10.1
[INFO] [stderr]     Checking line-clipping v0.3.7
[INFO] [stderr]    Compiling portable-atomic v1.13.1
[INFO] [stderr]    Compiling document-features v0.2.12
[INFO] [stderr]     Checking rustls-native-certs v0.8.4
[INFO] [stderr]     Checking crypto-common v0.2.2
[INFO] [stderr]     Checking block-buffer v0.12.0
[INFO] [stderr]     Checking memchr v2.8.1
[INFO] [stderr]     Checking x11rb-protocol v0.13.2
[INFO] [stderr]     Checking strum v0.28.0
[INFO] [stderr]     Checking flatbuffers v25.12.19
[INFO] [stderr]     Checking elements_rs v0.2.7
[INFO] [stderr]     Checking serde_json v1.0.150
[INFO] [stderr]     Checking http-body-util v0.1.3
[INFO] [stderr]     Checking console v0.16.3
[INFO] [stderr]     Checking unit-prefix v0.5.2
[INFO] [stderr]     Checking digest v0.11.3
[INFO] [stderr]     Checking rayon v1.12.0
[INFO] [stderr]    Compiling darling_macro v0.23.0
[INFO] [stderr]     Checking idna_adapter v1.2.2
[INFO] [stderr]     Checking secrecy v0.10.3
[INFO] [stderr]     Checking md-5 v0.11.0
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking twox-hash v2.1.2
[INFO] [stderr]     Checking indicatif v0.18.4
[INFO] [stderr]    Compiling darling v0.23.0
[INFO] [stderr]     Checking indexmap v2.14.0
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]     Checking ratatui-widgets v0.3.0
[INFO] [stderr]     Checking client-uploader-traits v0.1.0
[INFO] [stderr]     Checking geometric-traits v0.1.0 (https://github.com/earth-metabolome-initiative/geometric-traits?branch=main#0178cb47)
[INFO] [stderr]     Checking gethostname v1.1.0
[INFO] [stderr]     Checking crossterm v0.29.0
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]     Checking ratatui-macros v0.7.0
[INFO] [stderr]     Checking hyper v1.10.1
[INFO] [stderr]     Checking tower v0.5.3
[INFO] [stderr]     Checking tokio-util v0.7.18
[INFO] [stderr]     Checking tokio-stream v0.1.18
[INFO] [stderr]     Checking ratatui-crossterm v0.1.0
[INFO] [stderr]     Checking tower-http v0.6.11
[INFO] [stderr]     Checking ratatui v0.30.0
[INFO] [stderr]     Checking hyper-util v0.1.20
[INFO] [stderr]     Checking rustls-webpki v0.103.13
[INFO] [stderr]     Checking x11rb v0.13.2
[INFO] [stderr]     Checking half v2.7.1
[INFO] [stderr]     Checking ahash v0.8.12
[INFO] [stderr]     Checking arrow-buffer v58.3.0
[INFO] [stderr]     Checking arboard v3.6.1
[INFO] [stderr]     Checking arrow-data v58.3.0
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking arrow-array v58.3.0
[INFO] [stderr]     Checking molecular-formulas v0.1.10
[INFO] [stderr]     Checking arrow-select v58.3.0
[INFO] [stderr]     Checking tokio-rustls v0.26.4
[INFO] [stderr]     Checking rustls-platform-verifier v0.7.0
[INFO] [stderr]     Checking hyper-rustls v0.27.9
[INFO] [stderr]     Checking reqwest v0.13.4
[INFO] [stderr]     Checking arrow-ipc v58.3.0
[INFO] [stderr]     Checking zenodo-rs v0.1.7
[INFO] [stderr]     Checking smiles-parser v0.1.0 (https://github.com/earth-metabolome-initiative/smiles-parser?branch=main#ba32bd63)
[INFO] [stderr]     Checking parquet v58.3.0
[INFO] [stderr]     Checking smarts-rs v0.1.0 (https://github.com/earth-metabolome-initiative/smarts-rs?branch=main#b94c942c)
[INFO] [stderr]     Checking smarts-evolution v0.1.0 (https://github.com/earth-metabolome-initiative/smarts-evolution?branch=main#03bba8d3)
[INFO] [stderr]     Checking chemtax-smarts v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 55.55s
[INFO] running `Command { std: "docker" "inspect" "569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89", kill_on_drop: false }`
[INFO] [stdout] 569d919dfcfa3fe9da714ebacbea169d71801ba2e29d0a4864bb7250c1e29e89
