[INFO] cloning repository https://github.com/TyberiusPrime/mbf_fastq_processor [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/TyberiusPrime/mbf_fastq_processor" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTyberiusPrime%2Fmbf_fastq_processor", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTyberiusPrime%2Fmbf_fastq_processor'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 3e21a8cd356b73a408b7add742d47d6401554693 [INFO] checking TyberiusPrime/mbf_fastq_processor/3e21a8cd356b73a408b7add742d47d6401554693 against try#24e1a22664233bce1f9b5dc6eee7c1f74327e28c for pr-159343 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTyberiusPrime%2Fmbf_fastq_processor" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-1-tc2/source/.cargo/config.toml [INFO] started tweaking git repo https://github.com/TyberiusPrime/mbf_fastq_processor [INFO] finished tweaking git repo https://github.com/TyberiusPrime/mbf_fastq_processor [INFO] tweaked toml for git repo https://github.com/TyberiusPrime/mbf_fastq_processor written to /workspace/builds/worker-1-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/TyberiusPrime/mbf_fastq_processor on toolchain 24e1a22664233bce1f9b5dc6eee7c1f74327e28c [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/TyberiusPrime/mbf_fastq_processor already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] 90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d [INFO] running `Command { std: "docker" "start" "90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d" "/opt/rustwide/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d" "/opt/rustwide/cargo-home/bin/cargo" "+24e1a22664233bce1f9b5dc6eee7c1f74327e28c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling quote v1.0.46 [INFO] [stderr] Compiling unicode-ident v1.0.24 [INFO] [stderr] Compiling libc v0.2.186 [INFO] [stderr] Checking cfg-if v1.0.4 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Checking memchr v2.8.2 [INFO] [stderr] Compiling find-msvc-tools v0.1.9 [INFO] [stderr] Compiling shlex v2.0.1 [INFO] [stderr] Compiling autocfg v1.5.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling libm v0.2.16 [INFO] [stderr] Compiling zerocopy v0.8.52 [INFO] [stderr] Checking hashbrown v0.17.1 [INFO] [stderr] Checking equivalent v1.0.2 [INFO] [stderr] Checking regex-syntax v0.8.11 [INFO] [stderr] Compiling pkg-config v0.3.33 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Checking typenum v1.20.1 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking itoa v1.0.18 [INFO] [stderr] Checking aho-corasick v1.1.4 [INFO] [stderr] Checking either v1.16.0 [INFO] [stderr] Compiling zmij v1.0.21 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Checking bytemuck v1.25.0 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling serde_json v1.0.150 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Compiling syn v2.0.118 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Checking regex-automata v0.4.14 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling cc v1.2.65 [INFO] [stderr] Checking lexical-util v1.0.7 [INFO] [stderr] Checking wide v0.7.33 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Checking toml_writer v1.1.1+spec-1.1.0 [INFO] [stderr] Checking winnow v1.0.3 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Checking toml_parser v1.1.2+spec-1.1.0 [INFO] [stderr] Checking crossbeam-channel v0.5.15 [INFO] [stderr] Checking byteorder v1.5.0 [INFO] [stderr] Checking zlib-rs v0.6.5 [INFO] [stderr] Compiling ref-cast v1.0.25 [INFO] [stderr] Compiling version_check v0.9.5 [INFO] [stderr] Checking bitflags v2.13.0 [INFO] [stderr] Checking getrandom v0.2.17 [INFO] [stderr] Compiling anyhow v1.0.103 [INFO] [stderr] Checking foldhash v0.1.5 [INFO] [stderr] Checking winnow v0.7.15 [INFO] [stderr] Compiling radium v0.7.0 [INFO] [stderr] Checking rayon v1.12.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking hashbrown v0.15.5 [INFO] [stderr] Checking indexmap v2.14.0 [INFO] [stderr] Checking toml_datetime v0.7.5+spec-1.1.0 [INFO] [stderr] Checking csv-core v0.1.13 [INFO] [stderr] Checking simba v0.9.1 [INFO] [stderr] Checking fixedbitset v0.5.7 [INFO] [stderr] Checking lazy_static v1.5.0 [INFO] [stderr] Checking ryu v1.0.23 [INFO] [stderr] Checking bstr v1.12.3 [INFO] [stderr] Checking regex v1.12.4 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Checking bytes v1.12.0 [INFO] [stderr] Checking tap v1.0.1 [INFO] [stderr] Checking wyz v0.5.1 [INFO] [stderr] Checking bit-set v0.8.0 [INFO] [stderr] Checking petgraph v0.8.3 [INFO] [stderr] Checking csv v1.4.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking ndarray v0.16.1 [INFO] [stderr] Checking lexical-write-integer v1.0.6 [INFO] [stderr] Checking lexical-parse-integer v1.0.6 [INFO] [stderr] Checking ordered-float v5.3.0 [INFO] [stderr] Compiling generic-array v0.14.7 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Compiling serde_derive_internals v0.29.1 [INFO] [stderr] Checking itertools v0.14.0 [INFO] [stderr] Checking smallvec v1.15.2 [INFO] [stderr] Checking unicode-width v0.2.2 [INFO] [stderr] Checking codesnake v0.2.1 [INFO] [stderr] Checking dyn-clone v1.0.20 [INFO] [stderr] Compiling const_fn v0.4.12 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Compiling mutants v0.0.4 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking funty v2.0.0 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Checking toml_edit v0.24.1+spec-1.1.0 [INFO] [stderr] Checking bytecount v0.6.9 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking stringpod v0.3.0 [INFO] [stderr] Checking lexical-write-float v1.0.6 [INFO] [stderr] Checking bitvec v1.1.1 [INFO] [stderr] Checking lexical-parse-float v1.0.6 [INFO] [stderr] Checking noodles-core v0.19.0 [INFO] [stderr] Checking num_cpus v1.17.0 [INFO] [stderr] Compiling mutants v0.0.3 [INFO] [stderr] Checking bit-vec v0.9.1 [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Checking scopeguard v1.2.0 [INFO] [stderr] Checking lock_api v0.4.14 [INFO] [stderr] Compiling rustix v1.1.4 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Checking crypto-common v0.1.7 [INFO] [stderr] Checking block-buffer v0.10.4 [INFO] [stderr] Checking spin v0.9.8 [INFO] [stderr] Checking nanorand v0.7.0 [INFO] [stderr] Checking futures-sink v0.3.32 [INFO] [stderr] Checking futures-core v0.3.32 [INFO] [stderr] Checking once_cell v1.21.4 [INFO] [stderr] Checking linux-raw-sys v0.12.1 [INFO] [stderr] Checking lexical-core v1.0.6 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Checking core_affinity v0.8.3 [INFO] [stderr] Checking crossbeam-queue v0.3.12 [INFO] [stderr] Checking log v0.4.33 [INFO] [stderr] Checking flume v0.11.1 [INFO] [stderr] Checking fastrand v2.4.1 [INFO] [stderr] Checking cpufeatures v0.2.17 [INFO] [stderr] Checking quick-error v1.2.3 [INFO] [stderr] Checking sha2 v0.10.9 [INFO] [stderr] Checking crossbeam v0.8.4 [INFO] [stderr] Checking ex v0.1.3 [INFO] [stderr] Checking siphasher v1.0.3 [INFO] [stderr] Checking json_value_merge v2.0.1 [INFO] [stderr] Checking disjoint v0.8.0 [INFO] [stderr] Checking anstyle v1.0.14 [INFO] [stderr] Compiling cfg_aliases v0.2.1 [INFO] [stderr] Checking union-find-rs v0.2.1 [INFO] [stderr] Checking rand_core v0.9.5 [INFO] [stderr] Checking rustc-hash v2.1.2 [INFO] [stderr] Compiling object v0.37.3 [INFO] [stderr] Checking fasteval v0.2.4 [INFO] [stderr] Compiling getrandom v0.4.3 [INFO] [stderr] Checking clap_lex v1.1.0 [INFO] [stderr] Compiling nix v0.31.3 [INFO] [stderr] Checking serde_spanned v1.1.1 [INFO] [stderr] Checking gimli v0.32.3 [INFO] [stderr] Checking clap_builder v4.6.0 [INFO] [stderr] Checking adler2 v2.0.1 [INFO] [stderr] Checking miniz_oxide v0.8.9 [INFO] [stderr] Checking toml_datetime v1.1.1+spec-1.1.0 [INFO] [stderr] Checking rustc-demangle v0.1.27 [INFO] [stderr] Checking sysinfo v0.38.4 [INFO] [stderr] Checking uuid v1.23.4 [INFO] [stderr] Checking toml v1.1.2+spec-1.1.0 [INFO] [stderr] Checking memmap2 v0.9.11 [INFO] [stderr] Checking toml v0.9.12+spec-1.1.0 [INFO] [stderr] Checking wait-timeout v0.2.1 [INFO] [stderr] Checking ciborium-io v0.2.2 [INFO] [stderr] Checking allocation-counter v0.8.1 [INFO] [stderr] Checking plotters-backend v0.3.7 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking cast v0.3.0 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking walkdir v2.5.0 [INFO] [stderr] Checking is-terminal v0.4.17 [INFO] [stderr] Checking anes v0.1.6 [INFO] [stderr] Checking plotters-svg v0.3.7 [INFO] [stderr] Checking oorandom v11.1.5 [INFO] [stderr] Checking plotters v0.3.7 [INFO] [stderr] Checking ctrlc v3.5.2 [INFO] [stderr] Compiling libz-sys v1.1.29 [INFO] [stderr] Compiling zstd-sys v2.0.16+zstd.1.5.7 [INFO] [stderr] Compiling libdeflate-sys v1.25.2 [INFO] [stderr] Checking tempfile v3.27.0 [INFO] [stderr] Compiling libmimalloc-sys v0.1.49 [INFO] [stderr] Compiling rusty-rapidgzip v0.2.1 [INFO] [stderr] Checking criterion-plot v0.5.0 [INFO] [stderr] Checking addr2line v0.25.1 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Checking flate2 v1.1.9 [INFO] [stderr] Checking noodles-bgzf v0.46.0 [INFO] [stderr] Checking noodles-csi v0.55.0 [INFO] [stderr] Checking backtrace v0.3.76 [INFO] [stderr] Checking noodles-sam v0.83.0 [INFO] [stderr] Checking noodles-bam v0.87.0 [INFO] [stderr] Checking noodles v0.108.0 [INFO] [stderr] Compiling zerocopy-derive v0.8.52 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling ref-cast-impl v1.0.25 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling toml-pretty-deser-macros v0.4.0 [INFO] [stderr] Compiling schemars_derive v1.2.1 [INFO] [stderr] Compiling getset v0.1.7 [INFO] [stderr] Compiling typed_floats_macros v1.0.7 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Compiling enum_dispatch v0.3.13 [INFO] [stderr] Compiling clap_derive v4.6.1 [INFO] [stderr] Compiling enumflags2_derive v0.7.12 [INFO] [stderr] Checking mimalloc v0.1.52 [INFO] [stderr] Checking hamming-resonate v0.4.0 [INFO] [stderr] Checking gzp v2.0.2 [INFO] [stderr] Checking zstd v0.13.3 [INFO] [stderr] Checking toml-pretty-deser v0.4.0 [INFO] [stderr] Checking typed_floats v1.0.7 [INFO] [stderr] Checking enumflags2 v0.7.12 [INFO] [stderr] Checking landlock v0.4.5 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking multimap v0.10.1 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking human-panic v2.0.8 [INFO] [stderr] Checking tinytemplate v1.2.1 [INFO] [stderr] Checking schemars v1.2.1 [INFO] [stderr] Checking clap v4.6.1 [INFO] [stderr] Checking clap_complete v4.6.7 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Checking half v2.7.1 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand_chacha v0.9.0 [INFO] [stderr] Checking ciborium-ll v0.2.2 [INFO] [stderr] Checking ciborium v0.2.2 [INFO] [stderr] Checking rand v0.9.4 [INFO] [stderr] Checking rand v0.8.6 [INFO] [stderr] Checking criterion v0.5.1 [INFO] [stderr] Checking scalable_cuckoo_filter v0.5.1 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking nalgebra v0.33.3 [INFO] [stderr] Checking statrs v0.18.0 [INFO] [stderr] Checking bio v3.0.0 [INFO] [stderr] Checking fastqrab-dna v0.9.1 (/opt/rustwide/workdir/fastqrab-dna) [INFO] [stderr] Checking fastqrab-config v0.9.1 (/opt/rustwide/workdir/fastqrab-config) [INFO] [stderr] Checking fastqrab-io v0.9.1 (/opt/rustwide/workdir/fastqrab-io) [INFO] [stderr] Checking fastqrab-steps v0.9.1 (/opt/rustwide/workdir/fastqrab-steps) [INFO] [stderr] Checking fastqrab v0.9.1 (/opt/rustwide/workdir/fastqrab) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 4m 14s [INFO] running `Command { std: "docker" "inspect" "90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d", kill_on_drop: false }` [INFO] [stdout] 90ad5ea363bdbeff68a506dcb7cd7756372f0f20591d50697aa14cbad421327d