[INFO] cloning repository https://github.com/lucaskbobadilla/ampliclust
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/lucaskbobadilla/ampliclust" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flucaskbobadilla%2Fampliclust", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flucaskbobadilla%2Fampliclust'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1fd0686da6ba55d31a14663a3657bbcdadcbd9ff
[INFO] checking lucaskbobadilla/ampliclust against master#df1ae0f7dd168513de2d89beb2cb7a95d4fdc118 for pr-159343
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flucaskbobadilla%2Fampliclust" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
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[INFO] started tweaking git repo https://github.com/lucaskbobadilla/ampliclust
[INFO] finished tweaking git repo https://github.com/lucaskbobadilla/ampliclust
[INFO] tweaked toml for git repo https://github.com/lucaskbobadilla/ampliclust written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/lucaskbobadilla/ampliclust on toolchain df1ae0f7dd168513de2d89beb2cb7a95d4fdc118
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/lucaskbobadilla/ampliclust already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded statrs v0.16.1
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded noodles v0.70.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded seq_io v0.3.4
[INFO] [stderr]   Downloaded noodles-core v0.14.0
[INFO] [stderr]   Downloaded order-stat v0.1.3
[INFO] [stderr]   Downloaded space v0.12.1
[INFO] [stderr]   Downloaded noodles-fastq v0.10.0
[INFO] [stderr]   Downloaded kdtree v0.7.0
[INFO] [stderr]   Downloaded ndarray-rand v0.14.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.28.0
[INFO] [stderr]   Downloaded lexical-core v0.8.5
[INFO] [stderr]   Downloaded noodles-fasta v0.35.0
[INFO] [stderr]   Downloaded noisy_float v0.2.0
[INFO] [stderr]   Downloaded linfa-nn v0.7.2
[INFO] [stderr]   Downloaded simba v0.6.0
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[INFO] [stderr]   Downloaded lexical-parse-integer v0.8.6
[INFO] [stderr]   Downloaded linfa-linalg v0.1.0
[INFO] [stderr]   Downloaded lexical-write-integer v0.8.5
[INFO] [stderr]   Downloaded noodles-bam v0.60.0
[INFO] [stderr]   Downloaded ndarray-stats v0.5.1
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded linfa-clustering v0.7.1
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded noodles-sam v0.57.0
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[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded rust-htslib v0.47.1
[INFO] [stderr]   Downloaded lexical-write-float v0.8.5
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[INFO] [stderr]   Downloaded sprs v0.11.1
[INFO] [stderr]   Downloaded lexical-parse-float v0.8.5
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded ndarray v0.15.6
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded lzma-sys v0.1.20
[INFO] [stderr]   Downloaded libz-sys v1.1.23
[INFO] [stderr]   Downloaded curl-sys v0.4.84+curl-8.17.0
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad
[INFO] running `Command { std: "docker" "start" "88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad" "/opt/rustwide/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad" "/opt/rustwide/cargo-home/bin/cargo" "+df1ae0f7dd168513de2d89beb2cb7a95d4fdc118" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.103
[INFO] [stderr]    Compiling quote v1.0.42
[INFO] [stderr]    Compiling libc v0.2.178
[INFO] [stderr]    Compiling find-msvc-tools v0.1.5
[INFO] [stderr]    Compiling zerocopy v0.8.31
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking hashbrown v0.16.1
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.4.0
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]     Checking lexical-util v0.8.5
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]     Checking simd-adler32 v0.3.7
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking writeable v0.6.2
[INFO] [stderr]     Checking litemap v0.8.1
[INFO] [stderr]     Checking crc32fast v1.5.0
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]    Compiling memchr v2.7.6
[INFO] [stderr]    Compiling icu_properties_data v2.1.1
[INFO] [stderr]     Checking indexmap v2.12.1
[INFO] [stderr]    Compiling regex-syntax v0.8.8
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]     Checking bytemuck v1.24.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking bytes v1.11.0
[INFO] [stderr]     Checking lexical-parse-integer v0.8.6
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking lexical-write-integer v0.8.5
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking flate2 v1.1.7
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling syn v2.0.111
[INFO] [stderr]     Checking noodles-core v0.14.0
[INFO] [stderr]    Compiling bitflags v2.10.0
[INFO] [stderr]     Checking anstream v0.6.21
[INFO] [stderr]     Checking lexical-write-float v0.8.5
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]     Checking noodles-bgzf v0.28.0
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking regex-automata v0.4.13
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking lexical-parse-float v0.8.5
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]     Checking getrandom v0.2.16
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling linfa v0.7.1
[INFO] [stderr]     Checking hashbrown v0.12.3
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking noodles-csi v0.32.0
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking noisy_float v0.2.0
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking lexical-core v0.8.5
[INFO] [stderr]     Checking clap_lex v0.7.6
[INFO] [stderr]    Compiling portable-atomic v1.11.1
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]     Checking percent-encoding v2.3.2
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]     Checking noodles-sam v0.57.0
[INFO] [stderr]     Checking clap_builder v4.5.53
[INFO] [stderr]    Compiling cc v1.2.48
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking rand_core v0.9.3
[INFO] [stderr]     Checking csv-core v0.1.13
[INFO] [stderr]     Checking toml_write v0.1.2
[INFO] [stderr]     Checking order-stat v0.1.3
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking winnow v0.7.14
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking console v0.15.11
[INFO] [stderr]     Checking rustix v1.1.2
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]    Compiling openssl-src v300.5.4+3.5.4
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]     Checking noodles-bam v0.60.0
[INFO] [stderr] error: could not compile `syn` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/df1ae0f7dd168513de2d89beb2cb7a95d4fdc118/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/syn-2.0.111/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="fold"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=a4046ea6e9f31653 -C extra-filename=-e169ac79dad5a9cf --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-43e32a25692bf44a.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-01cdf4ac6a2aaf5b.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-9533002ac35f5809.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad", kill_on_drop: false }`
[INFO] [stdout] 88c8672e8a0fac933dab575a3ce30acd04b0b091ac4f968cd513c731db077dad